Activity
From 06/30/2013 to 07/29/2013
07/29/2013
- 09:49 pm Bug #24 (Closed): rule display problem when open secondary panel
- * little display problem
* adjust the rule to screen wide
* open secondary panel, you will found the rule still acr... - 12:15 pm Bug #18 (Closed): embed example 2 from test not working
- 12:14 pm Feature #19 (Closed): new url parameter for public hub
- 12:14 pm Bug #12 (Closed): message after datahub submission confusion
- 12:13 pm Bug #20 (Closed): track information display problem
- 12:13 pm Bug #22 (Closed): no thing happens when click information after right click on refgene track
- 12:13 pm Bug #23 (Closed): metadata colormap not added for public hub by url parameter
07/28/2013
- 12:24 pm washugb v22 release
- We have applied v22 source code to our public servers.
h2. updates:
Please see our blog plots for details:
#... - 07:10 am Bug #23 (Resolved): metadata colormap not added for public hub by url parameter
- Use "metadata" parameter in URL to add terms to colormap.
07/27/2013
- 04:48 pm Bug #23 (Closed): metadata colormap not added for public hub by url parameter
- * if access the public hub by url parameter, will found the meta colormap was not added
- 03:52 pm Feature #19 (Resolved): new url parameter for public hub
- Thanks for the suggestion! See this example: http://epgg-test.wustl.edu/browser/?genome=hg18&publichub=mm1s
- 03:38 pm Bug #22 (Resolved): no thing happens when click information after right click on refgene track
- 03:38 pm Bug #20 (Resolved): track information display problem
- 03:37 pm Bug #12 (Resolved): message after datahub submission confusion
07/26/2013
- 10:25 pm Bug #22 (Closed): no thing happens when click information after right click on refgene track
- * just right click on refgene track, selection information, nothing happened
* see screenshot - 02:47 pm Feature #21 (New): operation history
- * Is it possible or useful to add the history of operations for the browser (back to some operation steps before etc)...
- 11:18 am Bug #20 (Closed): track information display problem
- * see the attached picture, the url displayed out of the box
- 11:02 am Bug #18: embed example 2 from test not working
- * confirmed solved.
* since the code will continue update, and this issue might happen again, we could left it as op... - 10:55 am Feature #19 (Closed): new url parameter for public hub
- * I am thinking a url parameter for public hub would be useful for loading hub by single click
* example like pubhub... - 10:52 am Bug #18 (Resolved): embed example 2 from test not working
- 10:47 am Feature #7 (Closed): store gene set info in datahub descriptor file
- 10:44 am Bug #18 (Closed): embed example 2 from test not working
- * visiting url: http://cgs.wustl.edu/~xzhou/plugin/2.html
* an error happens: Uncaught ReferenceError: trackstyle_co...
07/25/2013
- 09:42 pm Feature #17 (New): public datahub unload button?
- * I noticed that after I loaded a json datahub, the 'remove all' cannot be used to remove all added tracks (not a bug...
- 07:08 pm Browser Metadata Revision 5f46a05f: hg18 public hub added
- 07:08 pm Revision 5f46a05f: hg18 public hub added
- 07:07 pm Revision ed2c5f6e: public hub added
- 07:07 pm Browser Metadata Revision ed2c5f6e: public hub added
07/24/2013
- 04:51 pm Revision 8c368a17: first init
- 04:51 pm Browser Metadata Revision 8c368a17: first init
07/23/2013
- 01:44 pm Feature #1 (Rejected): switch genome button
- 08:00 am Feature #14 (Closed): Custom categorical track
- the browser still lacks custom track support for categorical tracks
- 07:59 am Feature #13 (New): Line plot
- Line plot is the new rendering mode for numerical tracks. Multiple tracks can be rendered in the same canvas sharing ...
07/22/2013
- 05:45 pm Bug #12 (Closed): message after datahub submission confusion
- * I was trying to submit a hub with 3 bam files, all display type were set to hide
* when I submit the hub, I was to... - 05:40 pm Feature #11 (New): ability to cancel a super-enhancer job
- * I just click 'submit' too quickly without specify an input bam, would it be good to add this option to allow cancel...
- 05:35 pm Feature #10 (New): gene set list in hub support url
- Is it possible that to enable url support in the new gene set list in datahub descriptor file?
For genes, the file... - 02:09 pm Browser Metadata Bug #4 (Closed): danRer7 assay H2AFV_ChIP-chip misplaced
- 02:09 pm Bug #8 (Closed): Datahub submission Json error
- 02:09 pm Bug #6 (Closed): scatter plot shared between genomes and caused Json syntax error
- 02:08 pm Bug #9 (Closed): no necessary 'Go Back' button after datahub submission
- 01:40 pm Bug #9 (Closed): no necessary 'Go Back' button after datahub submission
- *The 'Go Back' button should not appear after datahub submission
* if uses click it, the button will just disappear - 11:07 am Bug #8: Datahub submission Json error
- I missed a step in updating/installing browser code:
update tabix library by compiling original source code
tha... - 11:00 am Bug #8 (Resolved): Datahub submission Json error
- 10:56 am Bug #8 (Closed): Datahub submission Json error
- Trying to batch upload tracks. Worked last week before the latest update.
Datahub file: http://remc.wustl.edu/jgu... - 10:18 am washugb v21 release
- We just applied the v21 source code to our public servers.
h2. Function updates:
## the new 'Gene Set' under '... - 10:14 am Feature #7 (Closed): store gene set info in datahub descriptor file
- user can put gene sets or regions in hub descriptor file, so that this information is persistent and won't be lost wh...
- 09:33 am Bug #6 (Resolved): scatter plot shared between genomes and caused Json syntax error
07/19/2013
- 02:43 pm Bug #6 (Closed): scatter plot shared between genomes and caused Json syntax error
- * steps to reproduce
## open hg19
## add danRer7
## in danRer7, submit the default genelist as gene set
## in dan...
07/18/2013
- 05:12 pm Browser Metadata Bug #4 (Resolved): danRer7 assay H2AFV_ChIP-chip misplaced
- 04:56 pm Browser Metadata Bug #4 (Closed): danRer7 assay H2AFV_ChIP-chip misplaced
- * the assay H2AFV_ChIP-chip should belong to 'Histone modifications'
* thanks to HyungJoo - 01:34 pm Bug #3 (New): Safari 5 navigation display disorder
- * happend in Safari 5
* the navigation buttons not displayed well
* see attached screenshot
- 01:23 pm Bug #2 (Closed): chrome empty canvas
- * happend only in Google Chrome under MacOSX
* not existed in Safari, IE10, Firefox and even Google Chrome under Win... - 12:01 pm Feature #1 (Rejected): switch genome button
- adding switch genome button as a feature request.
Also available in: Atom