Bug #89

mCRF tracks not recognized

Added by Rebecca Lowdon over 10 years ago. Updated about 10 years ago.

Status:Closed Start date:11/05/2013
Priority:Normal Due date:
Assignee:Xin Zhou % Done:

0%
Category:- Spent time: -
Target version:-

Description

When I load my dataHub, some of the mCRF tracks are not recognized by the browser. They are set to mode:"full" to appear when loading, but they do not appear. They are also not found in the facet browser.
DataHub: http://cgs.wustl.edu/~rlowdon/skinProjHub.json
The 3 skin cell type mCRF tracks load fine. It is the two breast cell type mCRF (at the bottom of the file) that are not loading.

Thanks!

59.png (221.5 kB) Xin Zhou, 11/05/2013 11:53 am

History

#1
Updated by Xin Zhou over 10 years ago

  • File 59.png added
  • Status changed from New to Resolved

Thanks for the report, following issues have been fixed.

  • numerical hub tracks (bigwig or bedgraph) will be shown by default if their mode is labeled as "full" (legitimate mode is "show").
  • browser is made more tolerant for datahub track mode assignment (you can assign "show" for a bed track and it will be automatically turned to "full" mode)
  • updated facet cell prints track number as "red/green" (but not "green/red")

Two tracks are found to have invalid file URL and warning msg is given but is hard to see (need to drag down the message box to see, in screenshot). I will try to make the warning more evident.

#3
Updated by Daofeng Li about 10 years ago

  • Status changed from Resolved to Closed

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