Bug #227
missing 0% methylated CpG display in methylC track
| Status: | New | Start date: | 10/03/2014 | |
|---|---|---|---|---|
| Priority: | Normal | Due date: | ||
| Assignee: | - | % Done: | 0% |
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| Category: | - | Spent time: | - | |
| Target version: | - |
Description
Some 0% methylated CpGs are not displayed as a gray bar on methylC track.
Two examples in Tlr4 promoters of mm9.
chr4 66488800 66488801 0
chr4 66488820 66488821 0
In the screen shot, these two CpG weren't displayed in a data hub. Url: http://epigenomegateway.wustl.edu/browser/?genome=mm9&datahub=http://remc.wustl.edu/jgu/mouse/8w/tracks/8w_mouse_hub.json
If only displaying the methylC track, it shows the same things. Url: http://epigenomegateway.wustl.edu/browser/?genome=mm9&datahub=http://remc.wustl.edu/jgu/mouse/8w/tracks/8w_mouse_hub_test.json
Could this be a possible bug in the display of 0% methylated CpGs?
History
Updated by Daofeng Li over 9 years ago
Also see this session link: http://epigenomegateway.wustl.edu/browser/?genome=mm9&session=9BJzdPkxaZ&statusId=2132385799