Activity

From 12/12/2013 to 01/10/2014

11:11 pm Feature #135 (New): adjust track order in genome snapshot: * It might be useful that users could change the order of tracks in genome snapshot panel
* looks like same 'gene se... Daofeng Li

10:09 pm Feature #134 (New): Track configuration on ipad: *Configure a track could be only be accessed by right click
*On ipad, don't know how to do 'right click'
*Would it ... Daofeng Li

04:43 pm Bug #133 (Rejected): custom bed submit error: Invalid format, 5th field should be unique integer
This format is outdated, better use the new JSON format (like g... Xin Zhou
03:56 pm Bug #133 (Rejected): custom bed submit error: * url: http://cgs.wustl.edu/~dli/DM.fimo.chrombed.gz
* same file works for test server, when submit to public server... Daofeng Li
03:55 pm Bug #132 (Closed): default tracks were not be able to be added to genome snapshot: * fixed Daofeng Li

09:36 am Feature #58 (Resolved): make publichubs for ENCODE tracks: Xin Zhou
09:35 am Bug #132 (Resolved): default tracks were not be able to be added to genome snapshot: Xin Zhou
09:35 am Bug #132: default tracks were not be able to be added to genome snapshot: Fixed! Thanks. Xin Zhou
09:10 am Bug #130 (Resolved): chromosome sequence display error: Fixed in v30.5 Xin Zhou

09:15 pm Bug #131 (Closed): new genome have no 'Tracks' button: fixed and closed Daofeng Li
08:43 pm Bug #132 (Closed): default tracks were not be able to be added to genome snapshot: * v30.5
* loading hg19
* in genome snapshot panel, for example the refseq track was listed, but could not be able t... Daofeng Li

08:10 am Bug #131 (Resolved): new genome have no 'Tracks' button: Definitely a bug, fixed! Xin Zhou

11:27 pm Bug #131 (Closed): new genome have no 'Tracks' button: * add new genome from 'add new genome' button
* no 'Tracks' button
* not sure it's a design or a bug Daofeng Li
02:13 pm Bug #130 (Closed): chromosome sequence display error: chromosome sequence should be printed on chromosome bar at sufficient zoom-in level. During gene set view, zoom in at... Xin Zhou
09:03 am Bug #129 (Rejected): native tracks not shown in public hub: refseq and rmsk_ensemble are so called "native annotation tracks" and they do not belong to Roadmap track hub so they... Xin Zhou
08:57 am Bug #129 (Rejected): native tracks not shown in public hub: * the refseq and rmsk_ensemble didn't shown in public hub
* http://epgg-test.wustl.edu/browser/?genome=hg19&publichu... Daofeng Li
07:27 am Bug #119 (Resolved): fixedscale and track height probem in json hub: Remaining issues fixed in v30.4.1
* native track height configuration
* track order in the hub Xin Zhou
07:25 am Bug #123 (Resolved): embedded browser cannot handle hidden tracks: Fixed in v30.4.1 Xin Zhou

10:23 pm Bug #124 (Closed): Querying for SOX2 but got SOX21 when adding gene set: Fixed and closed. Daofeng Li
10:20 pm Bug #126 (Closed): genome snapshot error: Daofeng Li
10:20 pm Bug #126: genome snapshot error: Fixed and closed. Daofeng Li
10:20 pm Bug #125 (Closed): could not select numerical track from geneplot: Fixed and closed. Daofeng Li
10:18 pm Bug #127 (Closed): could not select track for scatter plot: Fixed and closed. Daofeng Li
08:23 am Bug #125 (Resolved): could not select numerical track from geneplot: Fixed in v30.4.1 Xin Zhou
08:23 am Bug #127 (Resolved): could not select track for scatter plot: Xin Zhou
08:23 am Bug #127: could not select track for scatter plot: Fixed in v30.4.1 Xin Zhou
08:22 am Bug #128 (Rejected): upload a session didn't show the status list: Not a bug it's the way it currently works. Downloaded session does not remember its original session group. Xin Zhou
07:44 am Bug #126 (Resolved): genome snapshot error: Fixed in v30.4.1. Thanks! Xin Zhou

10:01 pm Bug #128 (Rejected): upload a session didn't show the status list: * use the session id could show the status list
* a bug or a design? Daofeng Li
09:55 pm Bug #127 (Closed): could not select track for scatter plot: * like issue #125 Daofeng Li
09:51 pm Bug #126 (Closed): genome snapshot error: * the new v30.4 code
* loading roadmap hub
* select genome snapshot -> add tracks
* see error from attached screen... Daofeng Li
09:48 pm Bug #125 (Closed): could not select numerical track from geneplot: * the new v30.4 code
* after load Roadmap hub, could not add numerical tracks when doing geneplot Daofeng Li
07:21 am Bug #122: defaultcontent=on behavior differently since v30.2: Yes good point. Now you will need to import Roadmap hub to show these default tracks. I will make it possible for emb... Xin Zhou

05:40 pm Bug #122: defaultcontent=on behavior differently since v30.2: * this change would affect the embedded browser with default tracks
** like http://cgs.wustl.edu/~xzhou/plugin/1.htm... Daofeng Li

10:03 am Bug #122 (Rejected): defaultcontent=on behavior differently since v30.2: This is not an issue, rather a feature change.
There's no default dataset anymore. User must specifically choose a... Xin Zhou
09:29 am Bug #124 (Resolved): Querying for SOX2 but got SOX21 when adding gene set: Fixed on public browser. Xin Zhou
09:28 am Bug #124 (Closed): Querying for SOX2 but got SOX21 when adding gene set: Add gene set > enter SOX2 > Submit, but got SOX21 instead Xin Zhou

09:38 am Bug #123 (Closed): embedded browser cannot handle hidden tracks: If a track is set to be hidden by default, the embedding fails Xin Zhou

11:37 pm Bug #122 (Rejected): defaultcontent=on behavior differently since v30.2: * defaultcontent=on still works
* now if users want to see default tracks, have to use following link:
**http://epg... Daofeng Li

Also available in: Atom