Bug #222

methyC track combine error?

Added by Daofeng Li about 10 years ago. Updated about 10 years ago.

Status:Closed Start date:09/10/2014
Priority:Normal Due date:
Assignee:- % Done:

0%

Category:- Spent time: -
Target version:-

Description

Forward: coverage = 10, 5hmC = 0.1​
Reverse: coverage = 6, 5hmC = 0.5

M(CG) = (0.1*10 + 0.5*6) / (10 + 6) = 0.25

but instead it was

Combined: coverage = 10, 5hmC = 0.1

Screen Shot 2014-09-10 at 11.29.14 AM.png (13.7 kB) Daofeng Li, 09/10/2014 11:34 am

Screen Shot 2014-09-10 at 11.29.24 AM.png (12.1 kB) Daofeng Li, 09/10/2014 11:34 am

Screen Shot 2014-09-10 at 11.30.21 AM.png (11.7 kB) Daofeng Li, 09/10/2014 11:34 am

History

Updated by Xin Zhou about 10 years ago

  • Status changed from New to Resolved

It's a bug. Fixed. Thanks for finding it out!

Updated by Daofeng Li about 10 years ago

  • Status changed from Resolved to Closed

Have been working well now and this issue closed.

Also available in: Atom PDF