root / mm9 / decorInfo @ 84c81131
History | View | Annotate | Download (4.1 kB)
| 1 |
knownGene UCSC genes \N 2 0 1 http://genome.ucsc.edu/cgi-bin/hgGene?db=mm9&hgg_type=knownGene&hgg_gene= |
|---|---|
| 2 |
knownGenepromoter promoters (UCSC genes) knownGene 2 0 0 \N |
| 3 |
knownGeneutr3 3' UTRs (UCSC genes) knownGene 2 0 0 \N |
| 4 |
knownGeneutr5 5' UTRs (UCSC genes) knownGene 2 0 0 \N |
| 5 |
knownGeneexons exons (UCSC genes) knownGene 2 0 0 \N |
| 6 |
knownGeneintrons introns (UCSC genes) knownGene 2 0 0 \N |
| 7 |
refGene RefSeq genes \N 2 0 1 http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Search&db=Nucleotide&doptcmdl=GenBank&term= |
| 8 |
refGenepromoter promoters (RefSeq genes) refGene 2 0 0 \N |
| 9 |
refGeneutr3 3' UTRs (RefSeq genes) refGene 2 0 0 \N |
| 10 |
refGeneutr5 5' UTRs (RefSeq genes) refGene 2 0 0 \N |
| 11 |
refGeneexons exons (RefSeq genes) refGene 2 0 0 \N |
| 12 |
refGeneintrons introns (RefSeq genes) refGene 2 0 0 \N |
| 13 |
ensGene Ensembl genes \N 2 0 1 http://www.ensembl.org/Mus_musculus/geneview?gene= |
| 14 |
ensGenepromoter promoters (Ensembl genes) ensGene 2 0 0 \N |
| 15 |
ensGeneutr3 3' UTRs (Ensembl genes) ensGene 2 0 0 \N |
| 16 |
ensGeneutr5 5' UTRs (Ensembl genes) ensGene 2 0 0 \N |
| 17 |
ensGeneexons exons (Ensembl genes) ensGene 2 0 0 \N |
| 18 |
ensGeneintrons introns (Ensembl genes) ensGene 2 0 0 \N |
| 19 |
rmsk_ensemble RepeatMasker Ensemble \N 4 12 0 \N |
| 20 |
RNA RNA \N 4 0 0 \N |
| 21 |
RNAsrpRNA srpRNA (RNA) RNA 4 0 0 \N |
| 22 |
RNArRNA rRNA (RNA) RNA 4 0 0 \N |
| 23 |
RNAsnRNA snRNA (RNA) RNA 4 0 0 \N |
| 24 |
RNAtRNA tRNA (RNA) RNA 4 0 0 \N |
| 25 |
RNAscRNA scRNA (RNA) RNA 4 0 0 \N |
| 26 |
RNARNA RNA (RNA) RNA 4 0 0 \N |
| 27 |
DNA DNA transposon \N 4 0 0 \N |
| 28 |
DNATcMar TcMar (DNA transposon) DNA 4 0 0 \N |
| 29 |
DNATcMar? TcMar? (DNA transposon) DNA 4 0 0 \N |
| 30 |
DNADNA DNA (DNA transposon) DNA 4 0 0 \N |
| 31 |
DNATc2 Tc2 (DNA transposon) DNA 4 0 0 \N |
| 32 |
DNACharlie Charlie (DNA transposon) DNA 4 0 0 \N |
| 33 |
DNAMuDR MuDR (DNA transposon) DNA 4 0 0 \N |
| 34 |
DNAMER2_type MER2_type (DNA transposon) DNA 4 0 0 \N |
| 35 |
DNAPiggyBac PiggyBac (DNA transposon) DNA 4 0 0 \N |
| 36 |
DNATip100 Tip100 (DNA transposon) DNA 4 0 0 \N |
| 37 |
DNAMariner Mariner (DNA transposon) DNA 4 0 0 \N |
| 38 |
DNAAcHobo AcHobo (DNA transposon) DNA 4 0 0 \N |
| 39 |
DNAMER1_type MER1_type (DNA transposon) DNA 4 0 0 \N |
| 40 |
DNAMER1_type? MER1_type? (DNA transposon) DNA 4 0 0 \N |
| 41 |
DNATigger Tigger (DNA transposon) DNA 4 0 0 \N |
| 42 |
DNAhAT hAT (DNA transposon) DNA 4 0 0 \N |
| 43 |
DNAhAT? hAT? (DNA transposon) DNA 4 0 0 \N |
| 44 |
SINE SINE \N 4 0 0 \N |
| 45 |
SINEtRNA tRNA (SINE) SINE 4 0 0 \N |
| 46 |
SINEMIR MIR (SINE) SINE 4 0 0 \N |
| 47 |
SINESINE SINE (SINE) SINE 4 0 0 \N |
| 48 |
SINEB2 B2 (SINE) SINE 4 0 0 \N |
| 49 |
SINEID ID (SINE) SINE 4 0 0 \N |
| 50 |
SINEB4 B4 (SINE) SINE 4 0 0 \N |
| 51 |
SINEAlu Alu (SINE) SINE 4 0 0 \N |
| 52 |
LINE LINE \N 4 0 0 \N |
| 53 |
LINERTE RTE (LINE) LINE 4 0 0 \N |
| 54 |
LINEL2 L2 (LINE) LINE 4 0 0 \N |
| 55 |
LINEL1 L1 (LINE) LINE 4 0 0 \N |
| 56 |
LINECR1 CR1 (LINE) LINE 4 0 0 \N |
| 57 |
LTR LTR \N 4 0 0 \N |
| 58 |
LTRERV ERV (LTR) LTR 4 0 0 \N |
| 59 |
LTRERVL ERVL (LTR) LTR 4 0 0 \N |
| 60 |
LTRERVL? ERVL? (LTR) LTR 4 0 0 \N |
| 61 |
LTRMaLR MaLR (LTR) LTR 4 0 0 \N |
| 62 |
LTRLTR LTR (LTR) LTR 4 0 0 \N |
| 63 |
LTRERVK ERVK (LTR) LTR 4 0 0 \N |
| 64 |
LTRGypsy Gypsy (LTR) LTR 4 0 0 \N |
| 65 |
LTRGypsy? Gypsy? (LTR) LTR 4 0 0 \N |
| 66 |
LTRERV1 ERV1 (LTR) LTR 4 0 0 \N |
| 67 |
LTRERV1? ERV1? (LTR) LTR 4 0 0 \N |
| 68 |
LTRGenie? Genie? (LTR) LTR 4 0 0 \N |
| 69 |
Low_complexity low complexity \N 4 0 0 \N |
| 70 |
Satellite satellite \N 4 0 0 \N |
| 71 |
SatelliteSatellite satellite (satellite) Satellite 4 0 0 \N |
| 72 |
Satellitecentr centr (satellite) Satellite 4 0 0 \N |
| 73 |
Simple_repeat simple repeat \N 4 0 0 \N |
| 74 |
Other other repeats \N 4 0 0 \N |
| 75 |
Unknown unknown \N 4 0 0 \N |
| 76 |
UnknownUnknown Unknown (unknown) Unknown 4 0 0 \N |
| 77 |
UnknownY-chromosome Y-chromosome (unknown) Unknown 4 0 0 \N |
| 78 |
vertebratephastCons30way vertebrate PhastCons \N 6 8 0 \N |
| 79 |
euarchontogliresphastCons30way euarchontoglires PhastCons \N 6 8 0 \N |
| 80 |
placentalphastCons30way placental PhastCons \N 6 8 0 \N |
| 81 |
vertebratephyloP30way vertebrate PhyloP \N 6 8 0 \N |
| 82 |
euarchontogliresphyloP30way euarchontoglires PhyloP \N 6 8 0 \N |
| 83 |
placentalphyloP30way placental PhyloP \N 6 8 0 \N |
| 84 |
cpgisland CpG island \N 5 0 0 \N |
| 85 |
gc5Base GC percent \N 5 14 0 \N |
| 86 |
wgEncodeCrgMapabilityAlign100mer 100mer alignability ENCODE/CRG(Guigo) \N 7 14 0 \N |
| 87 |
wgEncodeCrgMapabilityAlign36mer 36mer alignability ENCODE/CRG(Guigo) \N 7 14 0 \N |
| 88 |
wgEncodeCrgMapabilityAlign40mer 40mer alignability ENCODE/CRG(Guigo) \N 7 14 0 \N |
| 89 |
wgEncodeCrgMapabilityAlign50mer 50mer alignability ENCODE/CRG(Guigo) \N 7 14 0 \N |
| 90 |
wgEncodeCrgMapabilityAlign75mer 75mer alignability ENCODE/CRG(Guigo) \N 7 14 0 \N |