root / hg19 / track2Detail_longrange @ 84c81131
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| 1 | 8c368a17 | Daofeng Li | wgEncodeGisChiaPetHct116Pol2InteractionsRep1 project=wgEncode; grant=Ruan; lab=GIS-Ruan; composite=wgEncodeGisChiaPet; dataType=ChiaPet; view=Interactions; cell=HCT-116; antibody=Pol2; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001427; dateSubmitted=2011-01-20; dateResubmitted=2011-09-23; dateUnrestricted=2011-10-20; subId=4856; labExpId=CHH524M; tableName=wgEncodeGisChiaPetHct116Pol2InteractionsRep1; type=bed; md5sum=9f5aac77cc663af8774b3ba74a8d84d8; size=266K |
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| 2 | 8c368a17 | Daofeng Li | wgEncodeGisChiaPetHelas3Pol2InteractionsRep1 project=wgEncode; grant=Ruan; lab=GIS-Ruan; composite=wgEncodeGisChiaPet; dataType=ChiaPet; view=Interactions; cell=HeLa-S3; antibody=Pol2; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001426; dateSubmitted=2011-01-20; dateResubmitted=2011-09-24; dateUnrestricted=2011-10-20; subId=4872; labExpId=IHH025M_hg19; tableName=wgEncodeGisChiaPetHelas3Pol2InteractionsRep1; type=bed; md5sum=56ca928080cfc8fbc6b909a3cbc17c88; size=1.5M |
| 3 | 8c368a17 | Daofeng Li | wgEncodeGisChiaPetK562CtcfInteractionsRep1 project=wgEncode; grant=Ruan; lab=GIS-Ruan; composite=wgEncodeGisChiaPet; dataType=ChiaPet; view=Interactions; cell=K562; antibody=CTCF; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002075; dateSubmitted=2011-06-08; dateResubmitted=2011-08-30; dateUnrestricted=2012-03-08; subId=4307; labExpId=CTCF_K562M_L7; tableName=wgEncodeGisChiaPetK562CtcfInteractionsRep1; type=bed; md5sum=278affe33be8614e6bbd653c0d06b475; size=928K |
| 4 | 8c368a17 | Daofeng Li | wgEncodeGisChiaPetK562Pol2InteractionsRep1 project=wgEncode; grant=Ruan; lab=GIS-Ruan; composite=wgEncodeGisChiaPet; dataType=ChiaPet; view=Interactions; cell=K562; antibody=Pol2; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001428; dateSubmitted=2011-01-20; dateResubmitted=2011-02-05; dateUnrestricted=2011-10-20; subId=4299; labExpId=CHK019M_L2_lane13; tableName=wgEncodeGisChiaPetK562Pol2InteractionsRep1; type=bed; md5sum=b2e00d8ace7accd6774c6243d1a22fa2; size=7.9M |
| 5 | 8c368a17 | Daofeng Li | wgEncodeGisChiaPetK562Pol2InteractionsRep2 project=wgEncode; grant=Ruan; lab=GIS-Ruan; composite=wgEncodeGisChiaPet; dataType=ChiaPet; view=Interactions; cell=K562; antibody=Pol2; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001428; dateSubmitted=2011-01-20; dateResubmitted=2011-02-05; dateUnrestricted=2011-10-20; subId=4300; labExpId=CHK019M_L2_lane24; tableName=wgEncodeGisChiaPetK562Pol2InteractionsRep2; type=bed; md5sum=62301d28728cb9b32d3af79d68a5ffb5; size=8.1M |
| 6 | 8c368a17 | Daofeng Li | wgEncodeGisChiaPetMcf7CtcfInteractionsRep1 project=wgEncode; grant=Ruan; lab=GIS-Ruan; composite=wgEncodeGisChiaPet; dataType=ChiaPet; view=Interactions; cell=MCF-7; antibody=CTCF; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002076; dateSubmitted=2011-06-08; dateResubmitted=2011-08-30; dateUnrestricted=2012-03-08; subId=4305; labExpId=CHM076M; tableName=wgEncodeGisChiaPetMcf7CtcfInteractionsRep1; type=bed; md5sum=9f67b2d5bf6fc29519e20a41b1a3031b; size=1.9M |
| 7 | 8c368a17 | Daofeng Li | wgEncodeGisChiaPetMcf7CtcfInteractionsRep2 project=wgEncode; grant=Ruan; lab=GIS-Ruan; composite=wgEncodeGisChiaPet; dataType=ChiaPet; view=Interactions; cell=MCF-7; antibody=CTCF; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002076; dateSubmitted=2011-06-08; dateResubmitted=2011-08-30; dateUnrestricted=2012-03-08; subId=4306; labExpId=CHM077M; tableName=wgEncodeGisChiaPetMcf7CtcfInteractionsRep2; type=bed; md5sum=3535501126bb760dcd068bec547ee21b; size=771K |
| 8 | 8c368a17 | Daofeng Li | wgEncodeGisChiaPetMcf7EraaInteractionsRep1 project=wgEncode; grant=Ruan; lab=GIS-Ruan; composite=wgEncodeGisChiaPet; dataType=ChiaPet; view=Interactions; cell=MCF-7; antibody=ERalpha_a; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001429; dateSubmitted=2011-09-20; dateUnrestricted=2012-04-20; subId=4843; labExpId=IHM001T_hg19; tableName=wgEncodeGisChiaPetMcf7EraaInteractionsRep1; type=bed; md5sum=8c004bab76f6a1f655a60095d5a5ebf2; size=155K |
| 9 | 8c368a17 | Daofeng Li | wgEncodeGisChiaPetMcf7EraaInteractionsRep2 project=wgEncode; grant=Ruan; lab=GIS-Ruan; composite=wgEncodeGisChiaPet; dataType=ChiaPet; view=Interactions; cell=MCF-7; antibody=ERalpha_a; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001429; dateSubmitted=2011-09-21; dateUnrestricted=2012-04-21; subId=4830; labExpId=IHH015T_hg19; tableName=wgEncodeGisChiaPetMcf7EraaInteractionsRep2; type=bed; md5sum=34ed7a1ba956f10a0ddf3250f42df63d; size=197K |
| 10 | 8c368a17 | Daofeng Li | wgEncodeGisChiaPetMcf7EraaInteractionsRep3 project=wgEncode; grant=Ruan; lab=GIS-Ruan; composite=wgEncodeGisChiaPet; dataType=ChiaPet; view=Interactions; cell=MCF-7; antibody=ERalpha_a; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001429; dateSubmitted=2011-09-24; dateUnrestricted=2012-04-23; subId=4874; labExpId=IHM096M; tableName=wgEncodeGisChiaPetMcf7EraaInteractionsRep3; type=bed; md5sum=621587fe9a5ced0c95a3920a92e35349; size=84K |
| 11 | 8c368a17 | Daofeng Li | wgEncodeGisChiaPetMcf7Pol2InteractionsRep1 project=wgEncode; grant=Ruan; lab=GIS-Ruan; composite=wgEncodeGisChiaPet; dataType=ChiaPet; view=Interactions; cell=MCF-7; antibody=Pol2; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001430; dateSubmitted=2011-01-20; dateResubmitted=2011-09-26; dateUnrestricted=2011-10-20; subId=4841; labExpId=CHM040M_hg19; tableName=wgEncodeGisChiaPetMcf7Pol2InteractionsRep1; type=bed; md5sum=820fc9a1b53b1edc7d4cfe91749849e9; size=171K |
| 12 | 8c368a17 | Daofeng Li | wgEncodeGisChiaPetMcf7Pol2InteractionsRep2 project=wgEncode; grant=Ruan; lab=GIS-Ruan; composite=wgEncodeGisChiaPet; dataType=ChiaPet; view=Interactions; cell=MCF-7; antibody=Pol2; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001430; dateSubmitted=2011-01-20; dateResubmitted=2011-09-23; dateUnrestricted=2011-10-20; subId=4842; labExpId=CHM053T_hg19; tableName=wgEncodeGisChiaPetMcf7Pol2InteractionsRep2; type=bed; md5sum=2eb1c0e7222800da2918bb3f1d1437e2; size=165K |
| 13 | 8c368a17 | Daofeng Li | wgEncodeGisChiaPetMcf7Pol2InteractionsRep3 project=wgEncode; grant=Ruan; lab=GIS-Ruan; composite=wgEncodeGisChiaPet; dataType=ChiaPet; view=Interactions; cell=MCF-7; antibody=Pol2; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001430; dateSubmitted=2011-06-08; dateResubmitted=2011-09-27; dateUnrestricted=2012-03-08; subId=4303; labExpId=CHM160M_L4; tableName=wgEncodeGisChiaPetMcf7Pol2InteractionsRep3; type=bed; md5sum=49595aa0f557ad62c403b15867e3d94e; size=6.1M |
| 14 | 8c368a17 | Daofeng Li | wgEncodeGisChiaPetMcf7Pol2InteractionsRep4 project=wgEncode; grant=Ruan; lab=GIS-Ruan; composite=wgEncodeGisChiaPet; dataType=ChiaPet; view=Interactions; cell=MCF-7; antibody=Pol2; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001430; dateSubmitted=2011-01-20; dateResubmitted=2011-09-27; dateUnrestricted=2011-10-20; subId=4304; labExpId=CHM163M_L4; tableName=wgEncodeGisChiaPetMcf7Pol2InteractionsRep4; type=bed; md5sum=280ba3becf3ef81b30af7eefa60e96d9; size=8.3M |
| 15 | 8c368a17 | Daofeng Li | wgEncodeGisChiaPetNb4Pol2InteractionsRep1 project=wgEncode; grant=Ruan; lab=GIS-Ruan; composite=wgEncodeGisChiaPet; dataType=ChiaPet; view=Interactions; cell=NB4; antibody=Pol2; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001431; dateSubmitted=2011-01-20; dateResubmitted=2011-09-24; dateUnrestricted=2011-10-20; subId=4873; labExpId=IHN009M_hg19; tableName=wgEncodeGisChiaPetNb4Pol2InteractionsRep1; type=bed; md5sum=5ef37c3ffb41acde3f0e3fe241131998; size=284K |
| 16 | 8c368a17 | Daofeng Li | wgEncodeUmassDekker5CGm12878Pk project=wgEncode; grant=Dekker; lab=UMass-Dekker; composite=wgEncodeUmassDekker5C; dataType=5C; view=Peaks; cell=GM12878; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001665; dateSubmitted=2011-01-25; dateResubmitted=2012-02-07; dateUnrestricted=2011-10-25; subId=5451; region=None; tableName=wgEncodeUmassDekker5CGm12878Pk; type=bed; md5sum=75ea972f516ffbab7f907f64f46176cf; size=33K |
| 17 | 8c368a17 | Daofeng Li | wgEncodeUmassDekker5CH1hescPk project=wgEncode; grant=Dekker; lab=UMass-Dekker; composite=wgEncodeUmassDekker5C; dataType=5C; view=Peaks; cell=H1-hESC; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001666; dateSubmitted=2011-01-25; dateResubmitted=2012-02-07; dateUnrestricted=2011-10-25; subId=5451; region=None; tableName=wgEncodeUmassDekker5CH1hescPk; type=bed; md5sum=0b830bc481812a030b09c4c18e4bf6df; size=35K |
| 18 | 8c368a17 | Daofeng Li | wgEncodeUmassDekker5CHelas3Pk project=wgEncode; grant=Dekker; lab=UMass-Dekker; composite=wgEncodeUmassDekker5C; dataType=5C; view=Peaks; cell=HeLa-S3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001667; dateSubmitted=2011-01-25; dateResubmitted=2012-02-07; dateUnrestricted=2011-10-25; subId=5451; region=None; tableName=wgEncodeUmassDekker5CHelas3Pk; type=bed; md5sum=b3e549a8a1dc7aaa1bc367da2d6d0910; size=51K |
| 19 | 8c368a17 | Daofeng Li | wgEncodeUmassDekker5CK562Pk project=wgEncode; grant=Dekker; lab=UMass-Dekker; composite=wgEncodeUmassDekker5C; dataType=5C; view=Peaks; cell=K562; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001668; dateSubmitted=2011-01-25; dateResubmitted=2012-02-07; dateUnrestricted=2011-10-25; subId=5451; region=None; tableName=wgEncodeUmassDekker5CK562Pk; type=bed; md5sum=af4345e5a20e4aa0a68c09083f405000; size=47K |
| 20 | 8c368a17 | Daofeng Li | Esc_20kb_hindIII_rep1 Publication=Topological domains in mammalian genomes identified by analysis of chromatin interactions; Journal=Nature 485, 376–380; Year=2012; Institution=UCSD; PI=Bing Ren; Sample=Human H1 embryonic stem cell; Restriction enzyme=HindIII; Replication=biological replicate 1; Bin size=20 kb; URL=http://chromosome.sdsc.edu/mouse/hi-c/download.html |
| 21 | 8c368a17 | Daofeng Li | Esc_20kb_hindIII_rep2 Publication=Topological domains in mammalian genomes identified by analysis of chromatin interactions; Journal=Nature 485, 376–380; Year=2012; Institution=UCSD; PI=Bing Ren; Sample=Human H1 embryonic stem cell; Restriction enzyme=HindIII; Replication=biological replicate 2; Bin size=20 kb; URL=http://chromosome.sdsc.edu/mouse/hi-c/download.html |
| 22 | 8c368a17 | Daofeng Li | Esc_40kb_hindIII_rep1 Publication=Topological domains in mammalian genomes identified by analysis of chromatin interactions; Journal=Nature 485, 376–380; Year=2012; Institution=UCSD; PI=Bing Ren; Sample=Human H1 embryonic stem cell; Restriction enzyme=HindIII; Replication=biological replicate 1; Bin size=40 kb; URL=http://chromosome.sdsc.edu/mouse/hi-c/download.html |
| 23 | 8c368a17 | Daofeng Li | Esc_40kb_hindIII_rep2 Publication=Topological domains in mammalian genomes identified by analysis of chromatin interactions; Journal=Nature 485, 376–380; Year=2012; Institution=UCSD; PI=Bing Ren; Sample=Human H1 embryonic stem cell; Restriction enzyme=HindIII; Replication=biological replicate 2; Bin size=40 kb; URL=http://chromosome.sdsc.edu/mouse/hi-c/download.html |
| 24 | 8c368a17 | Daofeng Li | Esc_40kb_hindIII_combined Publication=Topological domains in mammalian genomes identified by analysis of chromatin interactions; Journal=Nature 485, 376–380; Year=2012; Institution=UCSD; PI=Bing Ren; Sample=Human H1 embryonic stem cell; Restriction enzyme=HindIII; Replication=replicates 1 and 2 combined; Bin size=40 kb; URL=http://chromosome.sdsc.edu/mouse/hi-c/download.html |
| 25 | 8c368a17 | Daofeng Li | IMR90_20kb_hindIII_rep1 Publication=Topological domains in mammalian genomes identified by analysis of chromatin interactions; Journal=Nature 485, 376–380; Year=2012; Institution=UCSD; PI=Bing Ren; Sample=Human IMR90 fibroblast; Restriction enzyme=HindIII; Replication=biological replicates 1; Bin size=20 kb; URL=http://chromosome.sdsc.edu/mouse/hi-c/download.html |
| 26 | 8c368a17 | Daofeng Li | IMR90_20kb_hindIII_rep2 Publication=Topological domains in mammalian genomes identified by analysis of chromatin interactions; Journal=Nature 485, 376–380; Year=2012; Institution=UCSD; PI=Bing Ren; Sample=Human IMR90 fibroblast; Restriction enzyme=HindIII; Replication=biological replicates 2; Bin size=20 kb; URL=http://chromosome.sdsc.edu/mouse/hi-c/download.html |
| 27 | 8c368a17 | Daofeng Li | IMR90_40kb_hindIII_rep1 Publication=Topological domains in mammalian genomes identified by analysis of chromatin interactions; Journal=Nature 485, 376–380; Year=2012; Institution=UCSD; PI=Bing Ren; Sample=Human IMR90 fibroblast; Restriction enzyme=HindIII; Replication=biological replicate 1; Bin size=40 kb; URL=http://chromosome.sdsc.edu/mouse/hi-c/download.html |
| 28 | 8c368a17 | Daofeng Li | IMR90_40kb_hindIII_rep2 Publication=Topological domains in mammalian genomes identified by analysis of chromatin interactions; Journal=Nature 485, 376–380; Year=2012; Institution=UCSD; PI=Bing Ren; Sample=Human IMR90 fibroblast; Restriction enzyme=HindIII; Replication=biological 2; Bin size=40 kb; URL=http://chromosome.sdsc.edu/mouse/hi-c/download.html |
| 29 | 8c368a17 | Daofeng Li | IMR90_40kb_hindIII_combined Publication=Topological domains in mammalian genomes identified by analysis of chromatin interactions; Journal=Nature 485, 376–380; Year=2012; Institution=UCSD; PI=Bing Ren; Sample=Human IMR90 fibroblast; Restriction enzyme=HindIII; Replication=replicates 1 and 2 combined; Bin size=40 kb; URL=http://chromosome.sdsc.edu/mouse/hi-c/download.html |
| 30 | 8c368a17 | Daofeng Li | GM06990_exp_100kb Publication=Comprehensive mapping of long-range interactions reveals folding principles of the human genome; Journal=Science 326(5950):289-93; Year=2009; Institution=Harvard/MIT/Broad/UMass; PI=Job Dekker; Sample=Human GM06990 cell line; Bin size=100 kb; Analysis=expected number of reads |
| 31 | 8c368a17 | Daofeng Li | GM06990_exp_1mb Publication=Comprehensive mapping of long-range interactions reveals folding principles of the human genome; Journal=Science 326(5950):289-93; Year=2009; Institution=Harvard/MIT/Broad/UMass; PI=Job Dekker; Sample=Human GM06990 cell line; Bin size=1 mb; Analysis=expected number of reads |
| 32 | 8c368a17 | Daofeng Li | GM06990_obs_100kb Publication=Comprehensive mapping of long-range interactions reveals folding principles of the human genome; Journal=Science 326(5950):289-93; Year=2009; Institution=Harvard/MIT/Broad/UMass; PI=Job Dekker; Sample=Human GM06990 cell line; Bin size=100 kb; Analysis=observed number of reads |
| 33 | 8c368a17 | Daofeng Li | GM06990_obs_1mb Publication=Comprehensive mapping of long-range interactions reveals folding principles of the human genome; Journal=Science 326(5950):289-93; Year=2009; Institution=Harvard/MIT/Broad/UMass; PI=Job Dekker; Sample=Human GM06990 cell line; Bin size=1 mb; Analysis=observed number of reads |
| 34 | 8c368a17 | Daofeng Li | GM06990_obsexp_100kb Publication=Comprehensive mapping of long-range interactions reveals folding principles of the human genome; Journal=Science 326(5950):289-93; Year=2009; Institution=Harvard/MIT/Broad/UMass; PI=Job Dekker; Sample=Human GM06990 cell line; Bin size=100 kb; Analysis=log2 ratio of observed/expected number of reads |
| 35 | 8c368a17 | Daofeng Li | GM06990_obsexp_1mb Publication=Comprehensive mapping of long-range interactions reveals folding principles of the human genome; Journal=Science 326(5950):289-93; Year=2009; Institution=Harvard/MIT/Broad/UMass; PI=Job Dekker; Sample=Human GM06990 cell line; Bin size=1 mb; Analysis=log2 ratio of observed/expected number of reads |
| 36 | 8c368a17 | Daofeng Li | GM06990_pearson_100kb Publication=Comprehensive mapping of long-range interactions reveals folding principles of the human genome; Journal=Science 326(5950):289-93; Year=2009; Institution=Harvard/MIT/Broad/UMass; PI=Job Dekker; Sample=Human GM06990 cell line; Bin size=100 kb; Analysis=pearson correlation coefficients |
| 37 | 8c368a17 | Daofeng Li | GM06990_pearson_1mb Publication=Comprehensive mapping of long-range interactions reveals folding principles of the human genome; Journal=Science 326(5950):289-93; Year=2009; Institution=Harvard/MIT/Broad/UMass; PI=Job Dekker; Sample=Human GM06990 cell line; Bin size=1 mb; Analysis=pearson correlation coefficients |
| 38 | 8c368a17 | Daofeng Li | K562_exp_100kb Publication=Comprehensive mapping of long-range interactions reveals folding principles of the human genome; Journal=Science 326(5950):289-93; Year=2009; Institution=Harvard/MIT/Broad/UMass; PI=Job Dekker; Sample=Human K562 cell line; Bin size=100 kb; Analysis=expected number of reads |
| 39 | 8c368a17 | Daofeng Li | K562_exp_1mb Publication=Comprehensive mapping of long-range interactions reveals folding principles of the human genome; Journal=Science 326(5950):289-93; Year=2009; Institution=Harvard/MIT/Broad/UMass; PI=Job Dekker; Sample=Human K562 cell line; Bin size=1 mb; Analysis=expected number of reads |
| 40 | 8c368a17 | Daofeng Li | K562_obs_100kb Publication=Comprehensive mapping of long-range interactions reveals folding principles of the human genome; Journal=Science 326(5950):289-93; Year=2009; Institution=Harvard/MIT/Broad/UMass; PI=Job Dekker; Sample=Human K562 cell line; Bin size=100 kb; Analysis=observed number of reads |
| 41 | 8c368a17 | Daofeng Li | K562_obs_1mb Publication=Comprehensive mapping of long-range interactions reveals folding principles of the human genome; Journal=Science 326(5950):289-93; Year=2009; Institution=Harvard/MIT/Broad/UMass; PI=Job Dekker; Sample=Human K562 cell line; Bin size=1 mb; Analysis=observed number of reads |
| 42 | 8c368a17 | Daofeng Li | K562_obsexp_100kb Publication=Comprehensive mapping of long-range interactions reveals folding principles of the human genome; Journal=Science 326(5950):289-93; Year=2009; Institution=Harvard/MIT/Broad/UMass; PI=Job Dekker; Sample=Human K562 cell line; Bin size=100 kb; Analysis=log2 ratio of observed/expected number of reads |
| 43 | 8c368a17 | Daofeng Li | K562_obsexp_1mb Publication=Comprehensive mapping of long-range interactions reveals folding principles of the human genome; Journal=Science 326(5950):289-93; Year=2009; Institution=Harvard/MIT/Broad/UMass; PI=Job Dekker; Sample=Human K562 cell line; Bin size=1 mb; Analysis=log2 ratio of observed/expected number of reads |
| 44 | 8c368a17 | Daofeng Li | K562_pearson_100kb Publication=Comprehensive mapping of long-range interactions reveals folding principles of the human genome; Journal=Science 326(5950):289-93; Year=2009; Institution=Harvard/MIT/Broad/UMass; PI=Job Dekker; Sample=Human K562 cell line; Bin size=100 kb; Analysis=pearson correlation coefficients |
| 45 | 8c368a17 | Daofeng Li | K562_pearson_1mb Publication=Comprehensive mapping of long-range interactions reveals folding principles of the human genome; Journal=Science 326(5950):289-93; Year=2009; Institution=Harvard/MIT/Broad/UMass; PI=Job Dekker; Sample=Human K562 cell line; Bin size=1 mb; Analysis=pearson correlation coefficients |
| 46 | 8c368a17 | Daofeng Li | GSM832456 Publication=Extensive promoter-centered chromatin interactions provide a topological basis for transcription regulation; Journal=Cell 148(1-2):84; Year=2012; Institution=Genome Institute of Singapore; PI=Michael Snyder, Yijun Ruan; Assay=ChIA-PET; Factor=PolII; Sample=MCF-7 |
| 47 | 8c368a17 | Daofeng Li | GSM832457 Publication=Extensive promoter-centered chromatin interactions provide a topological basis for transcription regulation; Journal=Cell 148(1-2):84; Year=2012; Institution=Genome Institute of Singapore; PI=Michael Snyder, Yijun Ruan; Assay=ChIA-PET; Factor=PolII; Sample=MCF-7 |
| 48 | 8c368a17 | Daofeng Li | GSM832458 Publication=Extensive promoter-centered chromatin interactions provide a topological basis for transcription regulation; Journal=Cell 148(1-2):84; Year=2012; Institution=Genome Institute of Singapore; PI=Michael Snyder, Yijun Ruan; Assay=ChIA-PET; Factor=PolII; Sample=MCF-7 |
| 49 | 8c368a17 | Daofeng Li | GSM832459 Publication=Extensive promoter-centered chromatin interactions provide a topological basis for transcription regulation; Journal=Cell 148(1-2):84; Year=2012; Institution=Genome Institute of Singapore; PI=Michael Snyder, Yijun Ruan; Assay=ChIA-PET; Factor=PolII; Sample=MCF-7 |
| 50 | 8c368a17 | Daofeng Li | GSM832460 Publication=Extensive promoter-centered chromatin interactions provide a topological basis for transcription regulation; Journal=Cell 148(1-2):84; Year=2012; Institution=Genome Institute of Singapore; PI=Michael Snyder, Yijun Ruan; Assay=ChIA-PET; Factor=PolII; Sample=HCT-116 |
| 51 | 8c368a17 | Daofeng Li | GSM832461 Publication=Extensive promoter-centered chromatin interactions provide a topological basis for transcription regulation; Journal=Cell 148(1-2):84; Year=2012; Institution=Genome Institute of Singapore; PI=Michael Snyder, Yijun Ruan; Assay=ChIA-PET; Factor=PolII; Sample=HeLa cells |
| 52 | 8c368a17 | Daofeng Li | GSM832462 Publication=Extensive promoter-centered chromatin interactions provide a topological basis for transcription regulation; Journal=Cell 148(1-2):84; Year=2012; Institution=Genome Institute of Singapore; PI=Michael Snyder, Yijun Ruan; Assay=ChIA-PET; Factor=PolII; Sample=NB4 cells |
| 53 | 8c368a17 | Daofeng Li | GSM832463 Publication=Extensive promoter-centered chromatin interactions provide a topological basis for transcription regulation; Journal=Cell 148(1-2):84; Year=2012; Institution=Genome Institute of Singapore; PI=Michael Snyder, Yijun Ruan; Assay=ChIA-PET; Factor=PolII; Sample=K562 cells |
| 54 | 8c368a17 | Daofeng Li | GSM832464 Publication=Extensive promoter-centered chromatin interactions provide a topological basis for transcription regulation; Journal=Cell 148(1-2):84; Year=2012; Institution=Genome Institute of Singapore; PI=Michael Snyder, Yijun Ruan; Assay=ChIA-PET; Factor=PolII; Sample=K562 cells |
| 55 | 8c368a17 | Daofeng Li | GSM832465 Publication=Extensive promoter-centered chromatin interactions provide a topological basis for transcription regulation; Journal=Cell 148(1-2):84; Year=2012; Institution=Genome Institute of Singapore; PI=Michael Snyder, Yijun Ruan; Assay=ChIA-PET; Factor=PolII; Sample=K562 cells |
| 56 | 8c368a17 | Daofeng Li | wgEncodeUw5CBjUw5cgeneMatrixRep1 project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUw5C; dataType=5C; view=Matrix; cell=BJ; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002097; dateSubmitted=2011-03-09; dateUnrestricted=2011-12-08; subId=3813; geoSampleAccession=GSM970285; region=UW-5C-Gene-Regions; type=matrix; md5sum=9cd5988da81b9b00b128ff2d72eb0e7f; size=108K; original filename=wgEncodeUw5CBjUw5cgeneMatrixRep1.matrix.tgz; download=http://hgdownload.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUw5C/ |
| 57 | 8c368a17 | Daofeng Li | wgEncodeUw5CBjUw5cgeneMatrixRep2 project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUw5C; dataType=5C; view=Matrix; cell=BJ; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002097; dateSubmitted=2011-03-09; dateUnrestricted=2011-12-08; subId=3813; geoSampleAccession=GSM970285; region=UW-5C-Gene-Regions; type=matrix; md5sum=d89be5ad5a365a81c7c2cb15c20987a7; size=117K; original filename=wgEncodeUw5CBjUw5cgeneMatrixRep2.matrix.tgz; download=http://hgdownload.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUw5C/ |
| 58 | 8c368a17 | Daofeng Li | wgEncodeUw5CCaco2Uw5cmycMatrixRep1 project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUw5C; dataType=5C; view=Matrix; cell=Caco-2; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002098; dateSubmitted=2011-03-09; dateUnrestricted=2011-12-08; subId=3813; geoSampleAccession=GSM970291; region=UW-5C-Myc-Region; type=matrix; md5sum=6378df5068dfffb4746c112f3127af38; size=65K; original filename=wgEncodeUw5CCaco2Uw5cmycMatrixRep1.matrix.tgz; download=http://hgdownload.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUw5C/ |
| 59 | 8c368a17 | Daofeng Li | wgEncodeUw5CCaco2Uw5cmycMatrixRep2 project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUw5C; dataType=5C; view=Matrix; cell=Caco-2; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002098; dateSubmitted=2011-03-09; dateUnrestricted=2011-12-08; subId=3813; geoSampleAccession=GSM970291; region=UW-5C-Myc-Region; type=matrix; md5sum=60337882e73719d29bd6e58aae3ed3ef; size=61K; original filename=wgEncodeUw5CCaco2Uw5cmycMatrixRep2.matrix.tgz; download=http://hgdownload.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUw5C/ |
| 60 | 8c368a17 | Daofeng Li | wgEncodeUw5CGm06990Uw5cgeneMatrixRep1 project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUw5C; dataType=5C; view=Matrix; cell=GM06990; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002099; dateSubmitted=2011-03-09; dateUnrestricted=2011-12-08; subId=3813; geoSampleAccession=GSM970290; region=UW-5C-Gene-Regions; type=matrix; md5sum=98f98dffae6ef76d9f1bfed6af15e15b; size=104K; original filename=wgEncodeUw5CGm06990Uw5cgeneMatrixRep1.matrix.tgz; download=http://hgdownload.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUw5C/ |
| 61 | 8c368a17 | Daofeng Li | wgEncodeUw5CGm06990Uw5cgeneMatrixRep2 project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUw5C; dataType=5C; view=Matrix; cell=GM06990; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002099; dateSubmitted=2011-03-09; dateUnrestricted=2011-12-08; subId=3813; geoSampleAccession=GSM970290; region=UW-5C-Gene-Regions; type=matrix; md5sum=a8e30ef27fc06736d6e8e89af65687df; size=109K; original filename=wgEncodeUw5CGm06990Uw5cgeneMatrixRep2.matrix.tgz; download=http://hgdownload.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUw5C/ |
| 62 | 8c368a17 | Daofeng Li | wgEncodeUw5CGm12878Uw5cmycMatrixRep1 project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUw5C; dataType=5C; view=Matrix; cell=GM12878; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002100; dateSubmitted=2011-03-09; dateUnrestricted=2011-12-08; subId=3813; geoSampleAccession=GSM970289; region=UW-5C-Myc-Region; type=matrix; md5sum=af0d93c6cae0e62fb0c3db5c3c1d04db; size=60K; original filename=wgEncodeUw5CGm12878Uw5cmycMatrixRep1.matrix.tgz; download=http://hgdownload.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUw5C/ |
| 63 | 8c368a17 | Daofeng Li | wgEncodeUw5CGm12878Uw5cmycMatrixRep2 project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUw5C; dataType=5C; view=Matrix; cell=GM12878; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002100; dateSubmitted=2011-03-09; dateUnrestricted=2011-12-08; subId=3813; geoSampleAccession=GSM970289; region=UW-5C-Myc-Region; type=matrix; md5sum=563f1035d0f9dbe6d482a1c341e4e4ca; size=61K; original filename=wgEncodeUw5CGm12878Uw5cmycMatrixRep2.matrix.tgz; download=http://hgdownload.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUw5C/ |
| 64 | 8c368a17 | Daofeng Li | wgEncodeUw5CHepg2Uw5cgeneMatrixRep1 project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUw5C; dataType=5C; view=Matrix; cell=HepG2; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002101; dateSubmitted=2011-03-09; dateUnrestricted=2011-12-08; subId=3813; geoSampleAccession=GSM970288; region=UW-5C-Gene-Regions; type=matrix; md5sum=e69722cb14320255ff13cf95029b6378; size=159K; original filename=wgEncodeUw5CHepg2Uw5cgeneMatrixRep1.matrix.tgz; download=http://hgdownload.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUw5C/ |
| 65 | 8c368a17 | Daofeng Li | wgEncodeUw5CHepg2Uw5cgeneMatrixRep2 project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUw5C; dataType=5C; view=Matrix; cell=HepG2; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002101; dateSubmitted=2011-03-09; dateUnrestricted=2011-12-08; subId=3813; geoSampleAccession=GSM970288; region=UW-5C-Gene-Regions; type=matrix; md5sum=18d1bd3ee4bd61bef86d819c03d4fc7f; size=116K; original filename=wgEncodeUw5CHepg2Uw5cgeneMatrixRep2.matrix.tgz; download=http://hgdownload.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUw5C/ |
| 66 | 8c368a17 | Daofeng Li | wgEncodeUw5CK562Uw5cmycMatrixRep1 project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUw5C; dataType=5C; view=Matrix; cell=K562; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002102; dateSubmitted=2011-03-09; dateUnrestricted=2011-12-08; subId=3813; geoSampleAccession=GSM970287; region=UW-5C-Myc-Region; type=matrix; md5sum=5a02b5d2d1b48057422ede63ec9d33a6; size=52K; original filename=wgEncodeUw5CK562Uw5cmycMatrixRep1.matrix.tgz; download=http://hgdownload.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUw5C/ |
| 67 | 8c368a17 | Daofeng Li | wgEncodeUw5CK562Uw5cmycMatrixRep2 project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUw5C; dataType=5C; view=Matrix; cell=K562; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002102; dateSubmitted=2011-03-09; dateUnrestricted=2011-12-08; subId=3813; geoSampleAccession=GSM970287; region=UW-5C-Myc-Region; type=matrix; md5sum=12c38b6299cdfbecf1ccce7f3d417059; size=60K; original filename=wgEncodeUw5CK562Uw5cmycMatrixRep2.matrix.tgz; download=http://hgdownload.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUw5C/ |
| 68 | 8c368a17 | Daofeng Li | wgEncodeUw5CLncapUw5cmycMatrixRep1 project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUw5C; dataType=5C; view=Matrix; cell=LNCaP; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002103; dateSubmitted=2011-03-09; dateUnrestricted=2011-12-08; subId=3813; geoSampleAccession=GSM970286; region=UW-5C-Myc-Region; type=matrix; md5sum=1d72bdd3547449bb17407709424adb63; size=65K; original filename=wgEncodeUw5CLncapUw5cmycMatrixRep1.matrix.tgz; download=http://hgdownload.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUw5C/ |
| 69 | 8c368a17 | Daofeng Li | wgEncodeUw5CLncapUw5cmycMatrixRep2 project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUw5C; dataType=5C; view=Matrix; cell=LNCaP; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002103; dateSubmitted=2011-03-09; dateUnrestricted=2011-12-08; subId=3813; geoSampleAccession=GSM970286; region=UW-5C-Myc-Region; type=matrix; md5sum=490d2bf7bb206a2904ef851d43af1374; size=61K; original filename=wgEncodeUw5CLncapUw5cmycMatrixRep2.matrix.tgz; download=http://hgdownload.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUw5C/ |
| 70 | 8c368a17 | Daofeng Li | wgEncodeUw5CMcf7Uw5cmycMatrixRep1 project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUw5C; dataType=5C; view=Matrix; cell=MCF-7; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002104; dateSubmitted=2011-03-09; dateUnrestricted=2011-12-08; subId=3813; geoSampleAccession=GSM970292; region=UW-5C-Myc-Region; type=matrix; md5sum=65253d1494c9466b29e2c39be78bfd95; size=66K; original filename=wgEncodeUw5CMcf7Uw5cmycMatrixRep1.matrix.tgz; download=http://hgdownload.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUw5C/ |
| 71 | 8c368a17 | Daofeng Li | wgEncodeUw5CMcf7Uw5cmycMatrixRep2 project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUw5C; dataType=5C; view=Matrix; cell=MCF-7; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002104; dateSubmitted=2011-03-09; dateUnrestricted=2011-12-08; subId=3813; geoSampleAccession=GSM970292; region=UW-5C-Myc-Region; type=matrix; md5sum=8e8d819fcb6dc0b43a60104d9d8035cb; size=62K; original filename=wgEncodeUw5CMcf7Uw5cmycMatrixRep2.matrix.tgz; download=http://hgdownload.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUw5C/ |
| 72 | 8c368a17 | Daofeng Li | wgEncodeUw5CSknshraUw5cgeneMatrixRep1 project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUw5C; dataType=5C; view=Matrix; cell=SK-N-SH_RA; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002107; dateSubmitted=2011-03-09; dateUnrestricted=2011-12-08; subId=3813; geoSampleAccession=GSM970284; region=UW-5C-Gene-Regions; type=matrix; md5sum=f3ad2cb3b21b762eb7b990be27357793; size=157K; original filename=wgEncodeUw5CSknshraUw5cgeneMatrixRep1.matrix.tgz; download=http://hgdownload.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUw5C/ |
| 73 | 8c368a17 | Daofeng Li | wgEncodeUw5CSknshraUw5cgeneMatrixRep2 project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUw5C; dataType=5C; view=Matrix; cell=SK-N-SH_RA; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002107; dateSubmitted=2011-03-09; dateUnrestricted=2011-12-08; subId=3813; geoSampleAccession=GSM970284; region=UW-5C-Gene-Regions; type=matrix; md5sum=474cbb04e667d7015ed564877f02d6a7; size=126K; original filename=wgEncodeUw5CSknshraUw5cgeneMatrixRep2.matrix.tgz; download=http://hgdownload.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUw5C/ |