root / mm9 / trackAttr2idx @ 52e54a06
History | View | Annotate | Download (11.1 kB)
| 1 |
10001 MEL (Leukemia (K562 analog)) 10001 MEL (Leukemia (K562 analog)) |
|---|---|
| 2 |
10002 ES-E14 (mouse embryonic stem cell line E14) 10002 ES-E14 (mouse embryonic stem cell line E14) |
| 3 |
10003 CH12 (B-cell lymphoma (GM12878 analog)) 10003 CH12 (B-cell lymphoma (GM12878 analog)) |
| 4 |
10004 NIH-3T3 (fibroblast) 10004 NIH-3T3 (fibroblast) |
| 5 |
10005 Cerebellum 10005 Cerebellum |
| 6 |
10006 LgIntestine (Large Intestine) 10006 LgIntestine (Large Intestine) |
| 7 |
10007 Patski (Mouse Embryonic Kidney Fibroblast. As described in Lingenfelter et al., 1998 (Nat Genet. 1998 18:212-3) and Yang et al., 2010 (Genome Res. 2010 20:614-22), PATSKI is a female interspecific mouse fibroblast that was derived from the embryonic kidney of an M.spretus x C57BL/6J hybrid mouse such that the C57Bl/6J X chromosome (maternal) is always the inactive X. This is an adherent cell line.) 10007 Patski (Mouse Embryonic Kidney Fibroblast. As described in Lingenfelter et al., 1998 (Nat Genet. 1998 18:212-3) and Yang et al., 2010 (Genome Res. 2010 20:614-22), PATSKI is a female interspecific mouse fibroblast that was derived from the embryonic kidney of an M.spretus x C57BL/6J hybrid mouse such that the C57Bl/6J X chromosome (maternal) is always the inactive X. This is an adherent cell line.) |
| 8 |
10008 GenitalFatPad (Genital Adipose tissue) 10008 GenitalFatPad (Genital Adipose tissue) |
| 9 |
10009 Liver 10009 Liver |
| 10 |
10010 A20 (B cell lymphoma line derived from a spontaneous reticulum cell neoplasm) 10010 A20 (B cell lymphoma line derived from a spontaneous reticulum cell neoplasm) |
| 11 |
10011 Cerebrum 10011 Cerebrum |
| 12 |
10012 Spleen 10012 Spleen |
| 13 |
10013 B-cell_(CD19+) (B Cell , CD19+) 10013 B-cell_(CD19+) (B Cell , CD19+) |
| 14 |
10014 Thymus 10014 Thymus |
| 15 |
10015 HeadlessEmbryo (Whole embryos with heads removed) 10015 HeadlessEmbryo (Whole embryos with heads removed) |
| 16 |
10016 Heart 10016 Heart |
| 17 |
10017 SkMuscle (Skeletal Muscle) 10017 SkMuscle (Skeletal Muscle) |
| 18 |
10018 B-cell_(CD43-) (mouse spleen B cells, CD43-,CD11b-) 10018 B-cell_(CD43-) (mouse spleen B cells, CD43-,CD11b-) |
| 19 |
10019 WholeBrain (Whole Brain) 10019 WholeBrain (Whole Brain) |
| 20 |
10020 416B (myeloid progenitor cells, CD34+) 10020 416B (myeloid progenitor cells, CD34+) |
| 21 |
10021 FatPad (Adipose tissue) 10021 FatPad (Adipose tissue) |
| 22 |
10022 T-Naive (Naive T cells: CD4+, CD25-) 10022 T-Naive (Naive T cells: CD4+, CD25-) |
| 23 |
10023 Lung 10023 Lung |
| 24 |
10024 Kidney 10024 Kidney |
| 25 |
10025 Erythrobl (Erythroblast, ter119+ cells from liver) 10025 Erythrobl (Erythroblast, ter119+ cells from liver) |
| 26 |
10026 G1E (Gata1- erythroid progenitor) 10026 G1E (Gata1- erythroid progenitor) |
| 27 |
10027 G1E-ER4 (Gata1 restored erythroid cells, differentiation induced by estradiol (E2)) 10027 G1E-ER4 (Gata1 restored erythroid cells, differentiation induced by estradiol (E2)) |
| 28 |
10028 Megakaryo (Megakaryocyte) 10028 Megakaryo (Megakaryocyte) |
| 29 |
10029 10T1/2 (Multipotential cell line that can be converted by 5-azacytidine into three mesodermal stem cell lineages.) 10029 10T1/2 (Multipotential cell line that can be converted by 5-azacytidine into three mesodermal stem cell lineages.) |
| 30 |
10030 C2C12 (Myoblast cell line derived from thigh muscle of C3H mice after crush injury) 10030 C2C12 (Myoblast cell line derived from thigh muscle of C3H mice after crush injury) |
| 31 |
10031 Cortex 10031 Cortex |
| 32 |
10032 BoneMarrow (Bone Marrow) 10032 BoneMarrow (Bone Marrow) |
| 33 |
10033 Limb 10033 Limb |
| 34 |
10034 BAT (Brown adipocytes tissue) 10034 BAT (Brown adipocytes tissue) |
| 35 |
10035 SmIntestine (Small Intestine) 10035 SmIntestine (Small Intestine) |
| 36 |
10036 MEF (Mouse Embryonic Fibroblast) 10036 MEF (Mouse Embryonic Fibroblast) |
| 37 |
10037 Placenta 10037 Placenta |
| 38 |
10038 BMDM (Bone marrow derived macrophage) 10038 BMDM (Bone marrow derived macrophage) |
| 39 |
10039 OlfactBulb (Olfactory Bulb) 10039 OlfactBulb (Olfactory Bulb) |
| 40 |
10040 Testis 10040 Testis |
| 41 |
10041 ES-Bruce4 (mouse embryonic stem cells) 10041 ES-Bruce4 (mouse embryonic stem cells) |
| 42 |
10042 MammaryGland (Mammary Gland) 10042 MammaryGland (Mammary Gland) |
| 43 |
10043 Duodenum 10043 Duodenum |
| 44 |
10044 Adrenal (Adrenal gland) 10044 Adrenal (Adrenal gland) |
| 45 |
10045 SubcFatPad (Subcutaneous Adipose tissue) 10045 SubcFatPad (Subcutaneous Adipose tissue) |
| 46 |
10046 Stomach 10046 Stomach |
| 47 |
10047 Colon 10047 Colon |
| 48 |
10048 Ovary 10048 Ovary |
| 49 |
10049 J1 ES cells 10002 J1 mouse embryonic stem cell |
| 50 |
10050 ATM2E-I13 cell A-MuLV transformed pro-B cells |
| 51 |
10051 ZhBTc4 (Undifferentiated mouse embryonic stem cells) 10051 ZhBTc4 (Undifferentiated mouse embryonic stem cells) |
| 52 |
10052 EPC_(CD117+_CD71+_TER119+) (liver fraction CD117+,CD71+,TER119+) 10052 EPC_(CD117+_CD71+_TER119+) (liver fraction CD117+,CD71+,TER119+) |
| 53 |
10053 ES-WW6_F1KO (Histone H1c, H1d, H1e triple null mouse embryonic stem cell line derived from ES-WW6 cells.) 10053 ES-WW6_F1KO (Histone H1c, H1d, H1e triple null mouse embryonic stem cell line derived from ES-WW6 cells.) |
| 54 |
10054 mG/ER (MEL-GATA-1-ER, This is a mouse suspension cell line derived from MEL cells by stable transfection with a GATA-1-ER fusion protein construct as described by Choe et al., 2003 (Cancer Res 63, 6363-6369, 2003). These cells can be terminally differentiated into mature erythroid cells with Β-estradiol treatment) 10054 mG/ER (MEL-GATA-1-ER, This is a mouse suspension cell line derived from MEL cells by stable transfection with a GATA-1-ER fusion protein construct as described by Choe et al., 2003 (Cancer Res 63, 6363-6369, 2003). These cells can be terminally differentiated into mature erythroid cells with Β-estradiol treatment) |
| 55 |
10055 HindlimbBud (embryo hindlimb buds) 10055 HindlimbBud (embryo hindlimb buds) |
| 56 |
10056 Retina 10056 Retina |
| 57 |
10057 THelper-Activated (Activated primary CD4 effector cells, isolated ex vivo) 10057 THelper-Activated (Activated primary CD4 effector cells, isolated ex vivo) |
| 58 |
10058 EPC_(CD117-_CD71+_TER119+) (liver fraction CD117-,CD71+,TER119+) 10058 EPC_(CD117-_CD71+_TER119+) (liver fraction CD117-,CD71+,TER119+) |
| 59 |
10059 ES-WW6 (ES-cells isolated from mix of ~20% C57/B6J, ~75% 129/Sv and ~5% SJL strains) 10059 ES-WW6 (ES-cells isolated from mix of ~20% C57/B6J, ~75% 129/Sv and ~5% SJL strains) |
| 60 |
10060 Mesoderm (axial somatic and lateral plate mesoderm from eviscerated headless, limbless embryos) 10060 Mesoderm (axial somatic and lateral plate mesoderm from eviscerated headless, limbless embryos) |
| 61 |
10061 EPC_(CD117+_CD71-_TER119-) (liver fraction CD117+,CD71-,TER119-) 10061 EPC_(CD117+_CD71-_TER119-) (liver fraction CD117+,CD71-,TER119-) |
| 62 |
10062 EPC_(CD117+_CD71+_TER119-) (liver fraction CD117+,CD71+,TER119-) 10062 EPC_(CD117+_CD71+_TER119-) (liver fraction CD117+,CD71+,TER119-) |
| 63 |
10063 ForelimbBud (embryo forelimb buds) 10063 ForelimbBud (embryo forelimb buds) |
| 64 |
10064 ES-CJ7 (ES-cells were originally isolated from 129S1/SVImJ mice by Swiatek PJ et al. in 1993 (Perinatal lethality and defects in hindbrain development in mice homozygous for a targeted mutation of the zinc finger gene Krox20. Swiatek PJ, Gridley T. Genes Dev. 1993 Nov,7(11):2071-84.)) 10064 ES-CJ7 (ES-cells were originally isolated from 129S1/SVImJ mice by Swiatek PJ et al. in 1993 (Perinatal lethality and defects in hindbrain development in mice homozygous for a targeted mutation of the zinc finger gene Krox20. Swiatek PJ, Gridley T. Genes Dev. 1993 Nov,7(11):2071-84.)) |
| 65 |
10065 TReg-Activated (Activated primary T regulatory cells, isolated ex vivo) 10065 TReg-Activated (Activated primary T regulatory cells, isolated ex vivo) |
| 66 |
10066 TReg (Regulatory T cells CD4+,CD25+) 10066 TReg (Regulatory T cells CD4+,CD25+) |
| 67 |
10067 3134 (Mammary) 10067 3134 (Mammary) |
| 68 |
10068 Fibroblast 10068 Fibroblast |
| 69 |
10069 MEP (mouse megakaryocyte erythroid progenitor cells with lineages CD16/32 and CD34-) 10069 MEP (mouse megakaryocyte erythroid progenitor cells with lineages CD16/32 and CD34-) |
| 70 |
10070 FVprogenitor (Friend virus infected murine CD34-,CD133-,Kit+,Sca1+ progenitor cells. Strains which can be used to generate the cells must carry the Fv2 sensitive allele (Fv2s). #PROVISIONAL) 10070 FVprogenitor (Friend virus infected murine CD34-,CD133-,Kit+,Sca1+ progenitor cells. Strains which can be used to generate the cells must carry the Fv2 sensitive allele (Fv2s). #PROVISIONAL) |
| 71 |
10071 FVLstem (Friend virus infected murine CD34+,CD133+,Kit+,Sca1+ Leukemia stem cells. Strains which can be used to generate the cells must carry the Fv2 sensitive allele (Fv2s). #PROVISIONAL) 10071 FVLstem (Friend virus infected murine CD34+,CD133+,Kit+,Sca1+ Leukemia stem cells. Strains which can be used to generate the cells must carry the Fv2 sensitive allele (Fv2s). #PROVISIONAL) |
| 72 |
10072 FrontalLobe (Frontal Lobe) 10072 FrontalLobe (Frontal Lobe) |
| 73 |
10073 Bladder (Urinary Bladder) 10073 Bladder (Urinary Bladder) |
| 74 |
10074 CNS (Central Nervous System) 10074 CNS (Central Nervous System) |
| 75 |
148 Hi-C longrange assay High-content genome conformation capture |
| 76 |
149 ChIA-PET longrange assay Chromatin interaction analysis by paired-end tag sequencing |
| 77 |
20001 RnaSeq (Sequencing analysis of RNA expression) 20001 RnaSeq (Sequencing analysis of RNA expression) |
| 78 |
20002 Input 20002 Input |
| 79 |
20003 H3K4me3 20003 H3K4me3 |
| 80 |
20004 H3K27me3 20004 H3K27me3 |
| 81 |
20005 H3K4me1 20005 H3K4me1 |
| 82 |
20006 H3K36me3 20006 H3K36me3 |
| 83 |
20007 H3K9me3 20007 H3K9me3 |
| 84 |
20008 GATA1 20008 GATA1 |
| 85 |
20009 TAL1 20009 TAL1 |
| 86 |
20010 GATA2 20010 GATA2 |
| 87 |
20011 CTCF 20011 CTCF |
| 88 |
20012 PAX5 20012 PAX5 |
| 89 |
20013 Pol2-4H8 20013 Pol2-4H8 |
| 90 |
20014 H3K79me3 20014 H3K79me3 |
| 91 |
20015 H3K4me2 20015 H3K4me2 |
| 92 |
20016 H3ac 20016 H3ac |
| 93 |
20017 H3K79me2 20017 H3K79me2 |
| 94 |
20018 Pol2 20018 Pol2 |
| 95 |
20019 p300 20019 p300 |
| 96 |
20020 Myogenin 20020 Myogenin |
| 97 |
20021 USF-1 20021 USF-1 |
| 98 |
20022 MyoD 20022 MyoD |
| 99 |
20023 NRSF 20023 NRSF |
| 100 |
20024 TCF12 20024 TCF12 |
| 101 |
20025 CEBPB 20025 CEBPB |
| 102 |
20026 FOSL1 20026 FOSL1 |
| 103 |
20027 Pol2(phosphoS2) 20027 Pol2(phosphoS2) |
| 104 |
20028 Max 20028 Max |
| 105 |
20029 SRF 20029 SRF |
| 106 |
20030 TCF3 20030 TCF3 |
| 107 |
20031 E2F4 20031 E2F4 |
| 108 |
20032 MafK 20032 MafK |
| 109 |
20033 JunD 20033 JunD |
| 110 |
20034 Mxi1 20034 Mxi1 |
| 111 |
20035 c-Myc 20035 c-Myc |
| 112 |
20036 TBP 20036 TBP |
| 113 |
20037 c-Myb 20037 c-Myb |
| 114 |
20038 BHLHE40 20038 BHLHE40 |
| 115 |
20039 NELFe 20039 NELFe |
| 116 |
20060 DnaseSeq (DNaseI HS Sequencing) 20040 DnaseSeq (DNaseI HS Sequencing) |
| 117 |
20040 Rad21 20040 Rad21 |
| 118 |
20061 DnaseDgf (DNase Digital Footprinting) 20041 DnaseDgf (DNase Digital Footprinting) |
| 119 |
20041 GATA-1 20041 GATA-1 |
| 120 |
20042 FLI1 20042 FLI1 |
| 121 |
20062 USF2 20042 USF2 |
| 122 |
20043 HCFC1 20043 HCFC1 |
| 123 |
20063 SMC3 20043 SMC3 |
| 124 |
20044 CHD2 20044 CHD2 |
| 125 |
20064 SIN3A 20044 SIN3A |
| 126 |
20045 c-Jun 20045 c-Jun |
| 127 |
20065 Nrf2 20045 Nrf2 |
| 128 |
20046 ZNF384 20046 ZNF384 |
| 129 |
20047 ZC3H11A 20047 ZC3H11A |
| 130 |
20048 ETS1 20048 ETS1 |
| 131 |
20049 MAZ 20049 MAZ |
| 132 |
20050 ZNF-MIZD-CP1 20050 ZNF-MIZD-CP1 |
| 133 |
20051 CHD1 20051 CHD1 |
| 134 |
20052 UBF 20052 UBF |
| 135 |
20053 COREST 20053 COREST |
| 136 |
20054 GCN5 20054 GCN5 |
| 137 |
20055 ZKSCAN1 20055 ZKSCAN1 |
| 138 |
20056 H3K27me3B 20056 H3K27me3B |
| 139 |
20057 H3K27ac 20057 H3K27ac |
| 140 |
20058 H3K36me3B 20058 H3K36me3B |
| 141 |
20059 H3K9ac 20059 H3K9ac |
| 142 |
30001 Stanford-m (Snyder - Stanford University) 30001 Stanford-m (Snyder - Stanford University) |
| 143 |
30002 UW-m (Stamatoyannopoulous - University of Washington) 30002 UW-m (Stamatoyannopoulous - University of Washington) |
| 144 |
30003 PSU-m (Hardison - Penn State University) 30003 PSU-m (Hardison - Penn State University) |
| 145 |
30004 Caltech-m (Wold - Califonia Institute of Technology) 30004 Caltech-m (Wold - Califonia Institute of Technology) |
| 146 |
30005 LICR-m (Ren - Ludwig Institue for Cancer Research) 30005 LICR-m (Ren - Ludwig Institue for Cancer Research) |
| 147 |
30006 Yale-m (Weissman - Yale University) 30006 Yale-m (Weissman - Yale University) |
| 148 |
30007 CSHL-m (Gingeras - Cold Spring Harbor Laboratory) 30007 CSHL-m (Gingeras - Cold Spring Harbor Laboratory) |