Activity

From 07/03/2014 to 08/01/2014

08/01/2014

11:55 pm Bug #213 (Closed): fixed scale for matplot not work?
* public v39.1.6
* trying to apply fixed scale for matplot, please see screenshot
Daofeng Li
11:54 pm Bug #206 (Closed): matplot error after split panel
fixed Daofeng Li
12:15 am Bug #206: matplot error after split panel
You see in the attached screenshot, one track could be used for matplot many times.
Daofeng Li

07/31/2014

07:52 am Bug #206: matplot error after split panel
sorry I couldn't repeat this error
1. a track (bedgraph/bigwig) can only be used in one matplot, it cannot be used...
Xin Zhou
12:26 am Bug #206: matplot error after split panel
this was fixed on test.
An new error happened:
1, when I try to add methylC to matplot, get following message:
...
Daofeng Li
12:21 am Bug #207 (Closed): fixed scale for bam track error
fixed Daofeng Li

07/30/2014

08:03 pm Bug #207 (Resolved): fixed scale for bam track error
fixed in 39.1.5 Xin Zhou
03:22 pm Bug #207 (Closed): fixed scale for bam track error
* public server v39.1.3
* view bam track in density mode, trying to set fixed scale
* see error in screenshot plz
Daofeng Li
08:46 am Bug #206 (Resolved): matplot error after split panel
Fixed in 39.1.5 on test
Xin Zhou

07/29/2014

11:19 pm Bug #206 (Closed): matplot error after split panel
* test server, v39.1.4
* load the roadmap hub, open a split panel
* choose any 2 tracks, apply matplot
* plz see e...
Daofeng Li

07/18/2014

12:31 pm Bug #205: custom BAM track could not be used for Genome Snapshot?
* I supposed to mean in density mode. Daofeng Li
11:27 am Bug #205 (Rejected): custom BAM track could not be used for Genome Snapshot?
Design not bug. Bam files are usually too big to generate whole genome read count. Xin Zhou
11:21 am Bug #205 (Rejected): custom BAM track could not be used for Genome Snapshot?
* not sure it's a bug or design
* submit a custom BAM track, like https://cgs.wustl.edu/~dli/CAGE/PE/DACSB_Aligned.o...
Daofeng Li

07/07/2014

03:04 pm Bug #204 (In Progress): gene set view not working
Xin Zhou
03:02 pm Bug #204: gene set view not working
Yes, I removed the 'group' settings and found the problem went away. Daofeng Li
02:49 pm Bug #204 (Resolved): gene set view not working
error is gone by itself, any tracks updated? Xin Zhou
01:59 pm Bug #203 (Closed): hidden methylC track not saved in session
This is useful. Daofeng Li
01:58 pm Bug #202 (Closed): private metadata vocabulary cannot be saved with session
Daofeng Li
01:58 pm Bug #201 (Closed): session save error
Daofeng Li
01:57 pm Bug #204 (In Progress): gene set view not working
* public server
* happend on my hub using default gene list
* http://epigenomegateway.wustl.edu/browser/?genome=mm9...
Daofeng Li

07/04/2014

06:13 pm Bug #202 (Resolved): private metadata vocabulary cannot be saved with session
fixed on v39.0.3 on public Xin Zhou
06:12 pm Bug #203 (Resolved): hidden methylC track not saved in session
fixed in v39.0.3 on public Xin Zhou
04:03 pm Bug #203 (Closed): hidden methylC track not saved in session
epigenomegateway.wustl.edu/browser/?genome=hg18&datahub=http://vizhub.wustl.edu/public/hg18/pmid19829295/hub.hidden Xin Zhou

07/03/2014

04:49 pm Bug #202 (Closed): private metadata vocabulary cannot be saved with session
example:
http://epigenomegateway.wustl.edu/browser/?genome=hg19&datahub=http://epgg-test.wustl.edu/x
Xin Zhou
04:47 pm Bug #201 (Resolved): session save error
fixed Xin Zhou
11:05 am Bug #201: session save error
forget screenshot Daofeng Li
11:05 am Bug #201 (Closed): session save error
* Please see the screenshot
* I have few smoothed tracks, did this cause problems?
* public, newest version
Daofeng Li
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