WashU Epigenome Browser

07/18/2014

12:31 pm Bug #205: custom BAM track could not be used for Genome Snapshot?

* I supposed to mean in density mode. Daofeng Li

11:27 am Bug #205 (Rejected): custom BAM track could not be used for Genome Snapshot?

Design not bug. Bam files are usually too big to generate whole genome read count. Xin Zhou

11:21 am Bug #205 (Rejected): custom BAM track could not be used for Genome Snapshot?

* not sure it's a bug or design
* submit a custom BAM track, like https://cgs.wustl.edu/~dli/CAGE/PE/DACSB_Aligned.o... Daofeng Li

07/07/2014

03:04 pm Bug #204 (In Progress): gene set view not working

Xin Zhou

03:02 pm Bug #204: gene set view not working

Yes, I removed the 'group' settings and found the problem went away. Daofeng Li

02:49 pm Bug #204 (Resolved): gene set view not working

error is gone by itself, any tracks updated? Xin Zhou

01:59 pm Bug #203 (Closed): hidden methylC track not saved in session

This is useful. Daofeng Li

01:58 pm Bug #202 (Closed): private metadata vocabulary cannot be saved with session

Daofeng Li

01:58 pm Bug #201 (Closed): session save error

Daofeng Li

01:57 pm Bug #204 (In Progress): gene set view not working

* public server
* happend on my hub using default gene list
* http://epigenomegateway.wustl.edu/browser/?genome=mm9... Daofeng Li

07/04/2014

06:13 pm Bug #202 (Resolved): private metadata vocabulary cannot be saved with session

fixed on v39.0.3 on public Xin Zhou

06:12 pm Bug #203 (Resolved): hidden methylC track not saved in session

fixed in v39.0.3 on public Xin Zhou

04:03 pm Bug #203 (Closed): hidden methylC track not saved in session

epigenomegateway.wustl.edu/browser/?genome=hg18&datahub=http://vizhub.wustl.edu/public/hg18/pmid19829295/hub.hidden Xin Zhou

07/03/2014

04:49 pm Bug #202 (Closed): private metadata vocabulary cannot be saved with session

example:
http://epigenomegateway.wustl.edu/browser/?genome=hg19&datahub=http://epgg-test.wustl.edu/x Xin Zhou

04:47 pm Bug #201 (Resolved): session save error

fixed Xin Zhou

11:05 am Bug #201: session save error

forget screenshot Daofeng Li

11:05 am Bug #201 (Closed): session save error

* Please see the screenshot
* I have few smoothed tracks, did this cause problems?
* public, newest version
Daofeng Li

07/02/2014

03:53 pm Bug #200 (Closed): making screenshot error

Worked now! Daofeng Li

03:16 pm Bug #200 (Resolved): making screenshot error

fixed in v39.0.1, thanks! Xin Zhou

03:02 pm Bug #200: making screenshot error

public server Daofeng Li

11:11 am Bug #200: making screenshot error

which server? Xin Zhou

11:02 am Bug #200 (Closed): making screenshot error

* get a JS error, please see attached screenshot
Daofeng Li

09:18 am wubrowse v39

Improved support on shared metadata system. View details at:
https://plus.google.com/117328025606874451908/posts/a... Xin Zhou