Activity

From 08/13/2013 to 09/11/2013

09/11/2013

09:43 pm Bug #41 (Closed): scatter plot json error
* using json hub http://vizhub.wustl.edu/hubSample/hg19/hub3.json
* select scatter plot for 1st gene set with any 2 ...
Daofeng Li
09:42 pm Bug #40 (Closed): gene plot crashed on gene set of json hub
* using hub http://vizhub.wustl.edu/hubSample/hg19/hub3.json for hg19
* do gene plot on 2nd gene set
* crashed with...
Daofeng Li
09:41 pm Bug #39 (Closed): json syntax error when running gene set view
* using the hub for hg19: http://vizhub.wustl.edu/hubSample/hg19/hub3.json
* run gene set view on 2nd gene set
* cr...
Daofeng Li
09:39 pm Bug #38 (Closed): new hub Turn off Gene Set View not work
* using the new json hub for hg19: http://vizhub.wustl.edu/hubSample/hg19/hub3.json
* after gene set view on 1st gen...
Daofeng Li

09/03/2013

10:18 pm Bug #37 (Closed): track loading indicator text always display 'working' after finish of loading
* the will happen if you click the header of each group
* for example, you click 'Expression', then 'add selected'
...
Daofeng Li

08/25/2013

05:22 pm Feature #36: add Brassica Rapa genome
forget the screenshot... Daofeng Li
05:20 pm Feature #36: add Brassica Rapa genome
added to test server.
While I got a Json syntax error when using chromosome to jump to another location.
the er...
Daofeng Li

08/24/2013

03:06 pm Feature #36: add Brassica Rapa genome
Have problem with downloading of the data.
Tried registration few times, was not able to access the data.
Daofeng Li
09:15 am Feature #35: add common bean genome
fixed Daofeng Li
04:01 am Feature #36 (Closed): add Brassica Rapa genome
http://brassicadb.org/brad/downloadOverview.php Xin Zhou
03:58 am Feature #35: add common bean genome
use "common bean" instead of "commonbean" for species name
Pay attention to spelling!
Xin Zhou

08/23/2013

10:02 pm Feature #34: add soybean genome
Thanks, fixed! Daofeng Li
10:02 pm Feature #35: add common bean genome
Thanks, fixed! Daofeng Li
09:27 pm Feature #35: add common bean genome
same problem as soybean genome, please remove trailing comma from "defaultScaffold" Xin Zhou
09:07 pm Feature #34: add soybean genome
thanks a lot!
Scaffold listing is not shown (click blue coordinate button, choose "zoom into a chrom"), please rem...
Xin Zhou

08/22/2013

12:30 pm Feature #35: add common bean genome
added to test Daofeng Li
12:27 pm Revision 52e54a06: add soybean and commonbean, fix mm10 decor link
Daofeng Li
12:27 pm Browser Metadata Revision 52e54a06: add soybean and commonbean, fix mm10 decor link
Daofeng Li

08/21/2013

06:17 pm Feature #34: add soybean genome
* soybean added to test.
* Could you please review and let me know your suggestions?
Daofeng Li
08:36 am Feature #35 (Closed): add common bean genome
genome information source:
ftp://ftp.jgi-psf.org/pub/compgen/phytozome/v9.0/Pvulgaris/assembly/
Xin Zhou
08:35 am Feature #34 (Closed): add soybean genome
genome information source:
ftp://ftp.jgi-psf.org/pub/compgen/phytozome/v9.0/Gmax/assembly/
requested by a soybe...
Xin Zhou

08/20/2013

10:57 pm Feature #33 (New): batch GEO id output
* I was thinking a function like output all the GEO id of the tracks currently displayed
* It might be useful for us...
Daofeng Li
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