Activity

From 08/05/2013 to 09/03/2013

10:18 pm Bug #37 (Closed): track loading indicator text always display 'working' after finish of loading: * the will happen if you click the header of each group
* for example, you click 'Expression', then 'add selected'
... Daofeng Li

05:22 pm Feature #36: add Brassica Rapa genome: forget the screenshot... Daofeng Li
05:20 pm Feature #36: add Brassica Rapa genome: added to test server.
While I got a Json syntax error when using chromosome to jump to another location.
the er... Daofeng Li

03:06 pm Feature #36: add Brassica Rapa genome: Have problem with downloading of the data.
Tried registration few times, was not able to access the data. Daofeng Li
09:15 am Feature #35: add common bean genome: fixed Daofeng Li
04:01 am Feature #36 (Closed): add Brassica Rapa genome: http://brassicadb.org/brad/downloadOverview.php Xin Zhou
03:58 am Feature #35: add common bean genome: use "common bean" instead of "commonbean" for species name
Pay attention to spelling! Xin Zhou

10:02 pm Feature #34: add soybean genome: Thanks, fixed! Daofeng Li
10:02 pm Feature #35: add common bean genome: Thanks, fixed! Daofeng Li
09:27 pm Feature #35: add common bean genome: same problem as soybean genome, please remove trailing comma from "defaultScaffold" Xin Zhou
09:07 pm Feature #34: add soybean genome: thanks a lot!
Scaffold listing is not shown (click blue coordinate button, choose "zoom into a chrom"), please rem... Xin Zhou

12:30 pm Feature #35: add common bean genome: added to test Daofeng Li
12:27 pm Browser Metadata Revision 52e54a06: add soybean and commonbean, fix mm10 decor link: Daofeng Li
12:27 pm Revision 52e54a06: add soybean and commonbean, fix mm10 decor link: Daofeng Li

06:17 pm Feature #34: add soybean genome: * soybean added to test.
* Could you please review and let me know your suggestions? Daofeng Li
08:36 am Feature #35 (Closed): add common bean genome: genome information source:
ftp://ftp.jgi-psf.org/pub/compgen/phytozome/v9.0/Pvulgaris/assembly/ Xin Zhou
08:35 am Feature #34 (Closed): add soybean genome: genome information source:
ftp://ftp.jgi-psf.org/pub/compgen/phytozome/v9.0/Gmax/assembly/
requested by a soybe... Xin Zhou

10:57 pm Feature #33 (New): batch GEO id output: * I was thinking a function like output all the GEO id of the tracks currently displayed
* It might be useful for us... Daofeng Li

09:32 am Bug #32 (Closed): right click twice caused background color change: closed due to not a real bug. Daofeng Li
09:21 am Bug #32: right click twice caused background color change: * I agree with you, it should be related to web browsers.
* anyway, I tested again at Mac, only reproduce it at Chro... Daofeng Li
07:13 am Bug #32: right click twice caused background color change: I can't reproduce it, it should be a issue with web browser, not the genome browser Xin Zhou

11:24 pm Bug #32 (Closed): right click twice caused background color change: * might be not a bug while it just happened on my computer
* I am using Google Chrome in Windows 7
* open browser, ... Daofeng Li
07:25 pm Bug #31 (Resolved): Cannot refresh Tabix index file: failed to properly reconstruct path of cached tabix index file
suppose a track is http://domain.com/path/to/file.g... Xin Zhou
07:22 pm Bug #31 (Closed): Cannot refresh Tabix index file: Cannot refresh Tabix index file Xin Zhou
02:59 pm washugb v23 release: We have applied version 23 of washugb code to our public servers today.
h2. Updates:
## custom categorical trac... Daofeng Li
01:28 pm Revision 71d28e6f: update with v23: Daofeng Li
01:28 pm Browser Metadata Revision 71d28e6f: update with v23: Daofeng Li

04:50 pm Feature #30 (New): bam track (full) view range limit: * in UCSC browser, when you zoom out like 1/4 chromosome range, the repeatmasker tracks will show 'zoom in to <= 10,0... Daofeng Li

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