root / hg19 / track2ProcessInfo_encode @ 8c368a17
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GSM605628_6 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
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GSM767846_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
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GSM897082_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
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GSM973682_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
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GSM803478_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
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GSM733734_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
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GSM646560_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 8 |
GSM849342_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
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GSM803442_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 10 |
GSM973667_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 11 |
GSM935555_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 12 |
GSM935381_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
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GSM605630_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
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GSM736504_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 15 |
GSM822268_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
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GSM733696_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
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GSM935528_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
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GSM973665_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
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GSM822303_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
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GSM830987_1 Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters. Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)). Reads were extended to 200 bp using the -e parameter, otherwise defaults were used. The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp. |
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GSM897084_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
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GSM864339_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
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GSM935397_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
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GSM935585_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
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GSM977046_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
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GSM765387_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
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GSM945230_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
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GSM945185_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
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GSM935329_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
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GSM897069_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
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GSM935296_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
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GSM849343_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
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GSM830526_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
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GSM973675_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
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GSM822305_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
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GSM803370_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
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GSM736509_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
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GSM923443_7 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
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GSM849027_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
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GSM977049_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
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GSM605627_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
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GSM923439_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
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GSM758572_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
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GSM803427_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
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GSM816649_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
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GSM945289_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
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GSM935384_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
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GSM765399_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 49 |
GSM973672_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
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GSM935436_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 51 |
GSM803476_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 52 |
GSM758568_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
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GSM923419_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq |
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GSM758559_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
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GSM935554_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
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GSM816659_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
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GSM767857_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
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GSM765386_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
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GSM733749_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
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GSM803410_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
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GSM803415_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
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GSM935429_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
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GSM945290_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
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GSM822281_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
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GSM767841_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
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GSM945212_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
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GSM897077_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
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GSM767856_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
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GSM973670_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
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GSM935360_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
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GSM935533_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
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GSM958738_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq |
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GSM816633_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
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GSM923445_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
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GSM782122_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
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GSM923453_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
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GSM803532_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
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GSM945184_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
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GSM973677_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
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GSM803522_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
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GSM803393_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
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GSM935552_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
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GSM767857_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
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GSM605635_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
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GSM849331_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
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GSM945210_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
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GSM822302_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
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GSM733657_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
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GSM765390_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
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GSM973686_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
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GSM945170_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
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GSM931362_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
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GSM749759_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
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GSM822296_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
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GSM736515_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
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GSM945167_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
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GSM803402_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
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GSM945251_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
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GSM849326_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
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GSM945856_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhHistone |
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GSM935303_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
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GSM749686_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
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GSM733689_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
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GSM733661_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
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GSM935387_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
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GSM923437_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq |
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GSM973672_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
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GSM765387_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
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GSM822269_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
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GSM803448_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
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GSM736520_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
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GSM973666_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
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GSM935614_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
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GSM803355_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
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GSM945292_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
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GSM935624_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
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GSM923446_8 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
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GSM830988_1 Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters. Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)). Reads were extended to 200 bp using the -e parameter, otherwise defaults were used. The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp. |
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GSM849367_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
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GSM803426_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
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GSM816652_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
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GSM897077_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
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GSM923440_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 124 |
GSM840137_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
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GSM935317_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
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GSM945233_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 127 |
GSM849339_5 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
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GSM803437_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 129 |
GSM765404_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 130 |
GSM822299_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 131 |
GSM923420_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq |
| 132 |
GSM803466_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 133 |
GSM733712_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 134 |
GSM973679_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 135 |
GSM822290_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 136 |
GSM736501_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 137 |
GSM803498_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 138 |
GSM973672_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 139 |
GSM945197_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 140 |
GSM736522_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 141 |
GSM605634_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 142 |
GSM935364_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 143 |
GSM831023_1 Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters. Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)). Reads were extended to 200 bp using the -e parameter, otherwise defaults were used. The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp. |
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GSM935401_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 145 |
GSM935413_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 146 |
GSM935569_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 147 |
GSM973663_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 148 |
GSM817343_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 149 |
GSM646561_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 150 |
GSM733658_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 151 |
GSM803371_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 152 |
GSM849342_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 153 |
GSM803359_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 154 |
GSM733697_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 155 |
GSM765405_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 156 |
GSM849365_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 157 |
GSM945180_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 158 |
GSM803380_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 159 |
GSM733706_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 160 |
GSM945205_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 161 |
GSM798321_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 162 |
GSM945281_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 163 |
GSM733646_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 164 |
GSM977042_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 165 |
GSM935319_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 166 |
GSM864342_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 167 |
GSM935637_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 168 |
GSM605628_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 169 |
GSM864346_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 170 |
GSM758564_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 171 |
GSM935524_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 172 |
GSM897074_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 173 |
GSM803475_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 174 |
GSM749762_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 175 |
GSM849326_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 176 |
GSM935457_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 177 |
GSM973684_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 178 |
GSM945174_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 179 |
GSM831041_1 Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters. Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)). Reads were extended to 200 bp using the -e parameter, otherwise defaults were used. The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp. |
| 180 |
GSM733729_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 181 |
GSM803364_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 182 |
GSM973675_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 183 |
GSM923444_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 184 |
GSM935371_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 185 |
GSM945203_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 186 |
GSM897076_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 187 |
GSM864354_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 188 |
GSM733751_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 189 |
GSM945242_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 190 |
GSM935366_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 191 |
GSM803418_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 192 |
GSM803348_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 193 |
GSM849361_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 194 |
GSM977041_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 195 |
GSM803428_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 196 |
GSM935297_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 197 |
GSM749698_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 198 |
GSM945280_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 199 |
GSM923436_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq |
| 200 |
GSM803336_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 201 |
GSM935295_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 202 |
GSM733637_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 203 |
GSM749752_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 204 |
GSM736603_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 205 |
GSM803428_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 206 |
GSM765392_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 207 |
GSM605633_5 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 208 |
GSM788069_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhHistone |
| 209 |
GSM758560_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 210 |
GSM945326_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 211 |
GSM945273_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 212 |
GSM788082_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhHistone |
| 213 |
GSM945185_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 214 |
GSM605630_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 215 |
GSM897086_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 216 |
GSM935328_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 217 |
GSM803472_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 218 |
GSM733745_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 219 |
GSM935544_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 220 |
GSM830523_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 221 |
GSM782123_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 222 |
GSM749769_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 223 |
GSM822300_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 224 |
GSM923425_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq |
| 225 |
GSM973678_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 226 |
GSM945231_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 227 |
GSM849031_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 228 |
GSM736609_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 229 |
GSM749727_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 230 |
GSM803433_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 231 |
GSM945258_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 232 |
GSM822309_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 233 |
GSM935515_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 234 |
GSM749731_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 235 |
GSM803385_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 236 |
GSM803494_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 237 |
GSM935284_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 238 |
GSM830526_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 239 |
GSM935385_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 240 |
GSM803340_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 241 |
GSM864347_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 242 |
GSM803516_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 243 |
GSM733663_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 244 |
GSM736518_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 245 |
GSM945284_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 246 |
GSM803389_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 247 |
GSM831027_1 Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters. Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)). Reads were extended to 200 bp using the -e parameter, otherwise defaults were used. The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp. |
| 248 |
GSM749716_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 249 |
GSM945208_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 250 |
GSM765400_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 251 |
GSM923442_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 252 |
GSM765395_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 253 |
GSM767856_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 254 |
GSM935313_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 255 |
GSM803356_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 256 |
GSM803449_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 257 |
GSM822294_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 258 |
GSM945297_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 259 |
GSM803376_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 260 |
GSM935471_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 261 |
GSM803339_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 262 |
GSM831033_1 Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters. Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)). Reads were extended to 200 bp using the -e parameter, otherwise defaults were used. The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp. |
| 263 |
GSM816637_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 264 |
GSM803436_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 265 |
GSM830533_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 266 |
GSM849328_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 267 |
GSM749776_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 268 |
GSM733739_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 269 |
GSM736639_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 270 |
GSM831024_1 Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters. Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)). Reads were extended to 200 bp using the -e parameter, otherwise defaults were used. The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp. |
| 271 |
GSM736619_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 272 |
GSM803542_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 273 |
GSM736513_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 274 |
GSM945300_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 275 |
GSM945311_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 276 |
GSM923425_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq |
| 277 |
GSM736556_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 278 |
GSM733753_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 279 |
GSM605630_6 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 280 |
GSM849365_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 281 |
GSM935458_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 282 |
GSM977049_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 283 |
GSM830535_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 284 |
GSM923426_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq |
| 285 |
GSM831039_1 Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters. Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)). Reads were extended to 200 bp using the -e parameter, otherwise defaults were used. The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp. |
| 286 |
GSM958748_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq |
| 287 |
GSM923441_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 288 |
GSM822306_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 289 |
GSM958733_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq |
| 290 |
GSM767846_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 291 |
GSM945207_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 292 |
GSM849366_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 293 |
GSM935593_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 294 |
GSM817342_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 295 |
GSM935302_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 296 |
GSM831032_1 Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters. Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)). Reads were extended to 200 bp using the -e parameter, otherwise defaults were used. The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp. |
| 297 |
GSM749704_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 298 |
GSM803528_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 299 |
GSM765404_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 300 |
GSM935570_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 301 |
GSM803354_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 302 |
GSM945261_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 303 |
GSM803408_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 304 |
GSM897085_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 305 |
GSM945162_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 306 |
GSM973692_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 307 |
GSM945168_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 308 |
GSM803460_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 309 |
GSM945209_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 310 |
GSM945211_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 311 |
GSM836271_1 Software=Bowtie, Cufflinks |
| 312 |
GSM935607_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 313 |
GSM935379_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 314 |
GSM923423_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq |
| 315 |
GSM736521_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 316 |
GSM749767_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 317 |
GSM749708_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 318 |
GSM816672_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 319 |
GSM945187_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 320 |
GSM733656_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 321 |
GSM849356_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 322 |
GSM803459_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 323 |
GSM849367_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 324 |
GSM758573_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 325 |
GSM923451_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 326 |
GSM749765_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 327 |
GSM849026_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 328 |
GSM935434_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 329 |
GSM977048_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 330 |
GSM605635_6 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 331 |
GSM765388_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 332 |
GSM977043_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 333 |
GSM945288_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 334 |
GSM803404_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 335 |
GSM849352_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 336 |
GSM945246_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 337 |
GSM736551_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 338 |
GSM733780_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 339 |
GSM945287_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 340 |
GSM897081_8 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 341 |
GSM803526_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 342 |
GSM822287_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 343 |
GSM977048_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 344 |
GSM803454_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 345 |
GSM945322_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 346 |
GSM935551_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 347 |
GSM822272_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 348 |
GSM923450_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 349 |
GSM758565_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 350 |
GSM749766_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 351 |
GSM803417_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 352 |
GSM831044_1 Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters. Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)). Reads were extended to 200 bp using the -e parameter, otherwise defaults were used. The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp. |
| 353 |
GSM945315_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 354 |
GSM822287_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 355 |
GSM767840_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 356 |
GSM749689_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 357 |
GSM958733_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq |
| 358 |
GSM822294_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 359 |
GSM977040_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 360 |
GSM945226_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 361 |
GSM849325_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 362 |
GSM733643_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 363 |
GSM977031_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 364 |
GSM935346_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 365 |
GSM803435_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 366 |
GSM849365_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 367 |
GSM733765_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 368 |
GSM733708_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 369 |
GSM945165_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 370 |
GSM935399_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 371 |
GSM736623_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 372 |
GSM767839_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 373 |
GSM973689_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 374 |
GSM736557_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 375 |
GSM935564_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 376 |
GSM767844_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 377 |
GSM788075_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhHistone |
| 378 |
GSM973665_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 379 |
GSM935517_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 380 |
GSM765393_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 381 |
GSM733692_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 382 |
GSM935300_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 383 |
GSM977042_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 384 |
GSM767840_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 385 |
GSM945228_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 386 |
GSM733660_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 387 |
GSM816626_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 388 |
GSM831012_1 Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters. Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)). Reads were extended to 200 bp using the -e parameter, otherwise defaults were used. The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp. |
| 389 |
GSM864361_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 390 |
GSM803535_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 391 |
GSM923446_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 392 |
GSM672834_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaSeq |
| 393 |
GSM758565_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 394 |
GSM945316_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 395 |
GSM849301_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 396 |
GSM935650_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 397 |
GSM935627_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 398 |
GSM733786_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 399 |
GSM830534_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 400 |
GSM935347_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 401 |
GSM923441_5 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 402 |
GSM935416_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 403 |
GSM605625_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 404 |
GSM922958_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhRnaSeq |
| 405 |
GSM803443_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 406 |
GSM765405_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 407 |
GSM977052_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 408 |
GSM897074_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 409 |
GSM945188_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 410 |
GSM923449_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 411 |
GSM803346_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 412 |
GSM605627_6 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 413 |
GSM923442_7 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 414 |
GSM830528_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 415 |
GSM733680_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 416 |
GSM935604_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 417 |
GSM646568_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 418 |
GSM758559_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 419 |
GSM897079_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 420 |
GSM923452_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 421 |
GSM749723_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 422 |
GSM923440_6 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 423 |
GSM973690_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 424 |
GSM803399_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 425 |
GSM765401_6 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 426 |
GSM897079_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 427 |
GSM977037_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 428 |
GSM736613_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 429 |
GSM765397_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 430 |
GSM923421_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq |
| 431 |
GSM765398_6 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 432 |
GSM864354_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 433 |
GSM803529_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 434 |
GSM736596_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 435 |
GSM803401_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 436 |
GSM977051_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 437 |
GSM816654_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 438 |
GSM803438_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 439 |
GSM831029_1 Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters. Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)). Reads were extended to 200 bp using the -e parameter, otherwise defaults were used. The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp. |
| 440 |
GSM849343_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 441 |
GSM977043_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 442 |
GSM733690_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 443 |
GSM923448_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 444 |
GSM923442_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 445 |
GSM923448_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 446 |
GSM935472_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 447 |
GSM923450_5 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 448 |
GSM849343_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 449 |
GSM973667_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 450 |
GSM935625_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 451 |
GSM923444_8 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 452 |
GSM733777_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 453 |
GSM822312_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 454 |
GSM847567_1 Software=Bowtie, Cufflinks |
| 455 |
GSM849325_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 456 |
GSM977047_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 457 |
GSM977035_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 458 |
GSM758573_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 459 |
GSM849349_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 460 |
GSM803362_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 461 |
GSM803534_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 462 |
GSM816657_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 463 |
GSM977031_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 464 |
GSM646570_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 465 |
GSM935462_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 466 |
GSM803499_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 467 |
GSM733719_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 468 |
GSM758569_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 469 |
GSM830527_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 470 |
GSM803484_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 471 |
GSM945160_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 472 |
GSM822298_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 473 |
GSM935613_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 474 |
GSM605627_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 475 |
GSM822295_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 476 |
GSM733662_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 477 |
GSM736514_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 478 |
GSM973688_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 479 |
GSM605635_5 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 480 |
GSM830525_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 481 |
GSM831034_1 Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters. Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)). Reads were extended to 200 bp using the -e parameter, otherwise defaults were used. The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp. |
| 482 |
GSM749690_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 483 |
GSM849362_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 484 |
GSM803540_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 485 |
GSM831019_1 Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters. Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)). Reads were extended to 200 bp using the -e parameter, otherwise defaults were used. The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp. |
| 486 |
GSM803491_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 487 |
GSM973676_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 488 |
GSM736526_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 489 |
GSM935559_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 490 |
GSM923440_5 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 491 |
GSM973691_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 492 |
GSM849328_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 493 |
GSM765396_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 494 |
GSM822285_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 495 |
GSM849368_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 496 |
GSM973681_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 497 |
GSM605632_5 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 498 |
GSM733772_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 499 |
GSM767855_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 500 |
GSM803517_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 501 |
GSM973686_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 502 |
GSM935418_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 503 |
GSM767850_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 504 |
GSM849346_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 505 |
GSM758562_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 506 |
GSM923451_6 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 507 |
GSM935580_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 508 |
GSM816629_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 509 |
GSM935638_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 510 |
GSM958739_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq |
| 511 |
GSM816438_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 512 |
GSM864357_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 513 |
GSM767854_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 514 |
GSM849348_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 515 |
GSM733758_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 516 |
GSM749688_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 517 |
GSM935494_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 518 |
GSM973679_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 519 |
GSM973692_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 520 |
GSM605633_6 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 521 |
GSM973681_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 522 |
GSM958746_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq |
| 523 |
GSM973670_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 524 |
GSM803347_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 525 |
GSM765395_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 526 |
GSM977046_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 527 |
GSM816670_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 528 |
GSM935619_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 529 |
GSM803500_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 530 |
GSM816651_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 531 |
GSM945262_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 532 |
GSM830519_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 533 |
GSM977039_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 534 |
GSM816629_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 535 |
GSM830535_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 536 |
GSM973674_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 537 |
GSM803521_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 538 |
GSM897079_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 539 |
GSM935518_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 540 |
GSM767849_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 541 |
GSM935644_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 542 |
GSM733723_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 543 |
GSM803372_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 544 |
GSM803354_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 545 |
GSM973667_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 546 |
GSM749714_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 547 |
GSM935435_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 548 |
GSM765395_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 549 |
GSM935611_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 550 |
GSM849355_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 551 |
GSM840136_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 552 |
GSM816634_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 553 |
GSM803378_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 554 |
GSM736543_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 555 |
GSM803337_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 556 |
GSM816636_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 557 |
GSM736622_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 558 |
GSM849367_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 559 |
GSM816644_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 560 |
GSM897076_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 561 |
GSM849029_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 562 |
GSM822304_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 563 |
GSM767848_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 564 |
GSM816666_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 565 |
GSM923449_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 566 |
GSM803463_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 567 |
GSM840138_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 568 |
GSM958730_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq |
| 569 |
GSM822303_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 570 |
GSM973682_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 571 |
GSM935289_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 572 |
GSM733704_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 573 |
GSM849364_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 574 |
GSM733721_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 575 |
GSM803452_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 576 |
GSM736611_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 577 |
GSM733636_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 578 |
GSM767838_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 579 |
GSM945299_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 580 |
GSM897069_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 581 |
GSM605629_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 582 |
GSM803448_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 583 |
GSM803382_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 584 |
GSM816650_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 585 |
GSM749768_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 586 |
GSM935286_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 587 |
GSM803412_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 588 |
GSM803485_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 589 |
GSM749712_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 590 |
GSM803352_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 591 |
GSM803487_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 592 |
GSM923430_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq |
| 593 |
GSM736577_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 594 |
GSM935353_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 595 |
GSM803506_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 596 |
GSM733742_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 597 |
GSM749732_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 598 |
GSM803416_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 599 |
GSM935402_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 600 |
GSM973681_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 601 |
GSM765387_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 602 |
GSM733674_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 603 |
GSM977041_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 604 |
GSM646563_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 605 |
GSM822311_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 606 |
GSM958738_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq |
| 607 |
GSM945172_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 608 |
GSM935468_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 609 |
GSM935597_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 610 |
GSM822289_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 611 |
GSM736560_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 612 |
GSM923450_8 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 613 |
GSM849303_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 614 |
GSM767855_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 615 |
GSM736595_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 616 |
GSM803493_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 617 |
GSM973693_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 618 |
GSM849328_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 619 |
GSM935547_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 620 |
GSM803396_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 621 |
GSM849333_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 622 |
GSM977045_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 623 |
GSM923444_12 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 624 |
GSM803519_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 625 |
GSM803446_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 626 |
GSM803537_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 627 |
GSM958746_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq |
| 628 |
GSM803467_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 629 |
GSM935274_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 630 |
GSM830520_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 631 |
GSM831006_1 Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters. Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)). Reads were extended to 200 bp using the -e parameter, otherwise defaults were used. The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp. |
| 632 |
GSM923425_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq |
| 633 |
GSM816632_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 634 |
GSM803524_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 635 |
GSM945240_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 636 |
GSM765389_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 637 |
GSM803366_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 638 |
GSM849363_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 639 |
GSM749694_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 640 |
GSM922956_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhRnaSeq |
| 641 |
GSM605635_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 642 |
GSM945222_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 643 |
GSM803387_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 644 |
GSM945196_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 645 |
GSM977038_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 646 |
GSM944522_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSunyRipSeq |
| 647 |
GSM864347_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 648 |
GSM935389_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 649 |
GSM945264_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 650 |
GSM958744_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq |
| 651 |
GSM935342_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 652 |
GSM935394_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 653 |
GSM767848_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 654 |
GSM977048_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 655 |
GSM945286_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 656 |
GSM864341_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 657 |
GSM749706_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 658 |
GSM749677_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 659 |
GSM803492_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 660 |
GSM803510_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 661 |
GSM935372_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 662 |
GSM803387_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 663 |
GSM849331_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 664 |
GSM607486_1 Alignment=Sequence reads were obtained and mapped to the human genome assembly hg18 (March, 2006) or hg19 (February, 2009) using the Illumina Genome Analyzer Pipeline. All reads mapping with two or fewer mismatches were retained and read starts were summed in sliding windows of 400 bp to create summary windows.; Peak Calling=Peaks were called with Sole-Search (http://chipseq.genomecenter.ucdavis.edu/cgi-bin/chipseq.cgi) |
| 665 |
GSM646559_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 666 |
GSM803367_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 667 |
GSM923444_9 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 668 |
GSM803409_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 669 |
GSM935287_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 670 |
GSM973692_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 671 |
GSM733648_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 672 |
GSM945250_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 673 |
GSM935428_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 674 |
GSM897083_7 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 675 |
GSM822283_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 676 |
GSM822295_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 677 |
GSM945276_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 678 |
GSM736629_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 679 |
GSM803365_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 680 |
GSM803358_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 681 |
GSM897078_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 682 |
GSM830520_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 683 |
GSM935427_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 684 |
GSM973685_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 685 |
GSM923449_8 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 686 |
GSM803359_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 687 |
GSM736541_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 688 |
GSM923450_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 689 |
GSM736499_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 690 |
GSM816646_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 691 |
GSM849028_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 692 |
GSM803392_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 693 |
GSM849349_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 694 |
GSM803343_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 695 |
GSM736507_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 696 |
GSM803394_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 697 |
GSM736545_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 698 |
GSM803461_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 699 |
GSM767849_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 700 |
GSM958745_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq |
| 701 |
GSM897070_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 702 |
GSM977045_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 703 |
GSM749693_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 704 |
GSM923421_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq |
| 705 |
GSM749666_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 706 |
GSM923447_8 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 707 |
GSM849026_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 708 |
GSM847563_1 Software=Bowtie, Cufflinks |
| 709 |
GSM849334_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 710 |
GSM749761_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 711 |
GSM849325_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 712 |
GSM958749_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq |
| 713 |
GSM945173_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 714 |
GSM803444_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 715 |
GSM733638_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 716 |
GSM935306_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 717 |
GSM897075_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 718 |
GSM803504_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 719 |
GSM945192_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 720 |
GSM733650_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 721 |
GSM816630_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 722 |
GSM733778_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 723 |
GSM923423_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq |
| 724 |
GSM864345_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 725 |
GSM935542_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 726 |
GSM945297_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 727 |
GSM849345_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 728 |
GSM935469_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 729 |
GSM849348_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 730 |
GSM803430_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 731 |
GSM977042_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 732 |
GSM803518_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 733 |
GSM849335_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 734 |
GSM749668_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 735 |
GSM935326_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 736 |
GSM935445_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 737 |
GSM803513_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 738 |
GSM945206_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 739 |
GSM849348_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 740 |
GSM733784_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 741 |
GSM758565_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 742 |
GSM958739_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq |
| 743 |
GSM803391_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 744 |
GSM822272_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 745 |
GSM945235_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 746 |
GSM803503_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 747 |
GSM803460_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 748 |
GSM923446_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 749 |
GSM803352_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 750 |
GSM736579_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 751 |
GSM935574_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 752 |
GSM945206_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 753 |
GSM830527_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 754 |
GSM945308_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 755 |
GSM945252_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 756 |
GSM803478_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 757 |
GSM803507_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 758 |
GSM897080_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 759 |
GSM849347_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 760 |
GSM822304_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 761 |
GSM945263_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 762 |
GSM935461_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 763 |
GSM935420_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 764 |
GSM897081_7 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 765 |
GSM945186_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 766 |
GSM840137_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 767 |
GSM945298_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 768 |
GSM923430_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq |
| 769 |
GSM945248_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 770 |
GSM935496_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 771 |
GSM935504_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 772 |
GSM945249_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 773 |
GSM935391_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 774 |
GSM803415_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 775 |
GSM935333_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 776 |
GSM803411_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 777 |
GSM935536_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 778 |
GSM935377_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 779 |
GSM935433_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 780 |
GSM758573_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 781 |
GSM733708_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 782 |
GSM849330_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 783 |
GSM803451_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 784 |
GSM733774_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 785 |
GSM803397_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 786 |
GSM864360_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 787 |
GSM849345_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 788 |
GSM803536_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 789 |
GSM816660_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 790 |
GSM973683_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 791 |
GSM923440_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 792 |
GSM749687_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 793 |
GSM822301_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 794 |
GSM608162_1 Alignment=Sequence reads were obtained and mapped to the human genome assembly hg18 (March, 2006) or hg19 (February, 2009) using the Illumina Genome Analyzer Pipeline. All reads mapping with two or fewer mismatches were retained and read starts were summed in sliding windows of 400 bp to create summary windows.; Peak Calling=Peaks were called with Sole-Search (http://chipseq.genomecenter.ucdavis.edu/cgi-bin/chipseq.cgi) |
| 795 |
GSM935592_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 796 |
GSM849338_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 797 |
GSM945203_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 798 |
GSM733785_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 799 |
GSM849324_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 800 |
GSM767840_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 801 |
GSM935368_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 802 |
GSM822293_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 803 |
GSM973677_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 804 |
GSM849350_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 805 |
GSM830524_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 806 |
GSM935622_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 807 |
GSM935455_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 808 |
GSM733679_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 809 |
GSM944520_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSunyRipSeq |
| 810 |
GSM935601_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 811 |
GSM733737_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 812 |
GSM803413_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 813 |
GSM830532_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 814 |
GSM831004_1 Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters. Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)). Reads were extended to 200 bp using the -e parameter, otherwise defaults were used. The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp. |
| 815 |
GSM736494_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 816 |
GSM849027_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 817 |
GSM803390_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 818 |
GSM803429_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 819 |
GSM816647_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 820 |
GSM935280_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 821 |
GSM945262_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 822 |
GSM765396_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 823 |
GSM935390_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 824 |
GSM923447_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 825 |
GSM945302_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 826 |
GSM935589_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 827 |
GSM935475_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 828 |
GSM816639_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 829 |
GSM733685_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 830 |
GSM736530_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 831 |
GSM803533_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 832 |
GSM830986_1 Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters. Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)). Reads were extended to 200 bp using the -e parameter, otherwise defaults were used. The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp. |
| 833 |
GSM767855_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 834 |
GSM736621_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 835 |
GSM935642_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 836 |
GSM864338_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 837 |
GSM935553_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 838 |
GSM816656_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 839 |
GSM849360_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 840 |
GSM803532_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 841 |
GSM803538_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 842 |
GSM935499_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 843 |
GSM605627_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 844 |
GSM849340_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 845 |
GSM672835_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaSeq |
| 846 |
GSM733686_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 847 |
GSM816671_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 848 |
GSM849304_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 849 |
GSM935426_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 850 |
GSM767845_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 851 |
GSM733668_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 852 |
GSM816669_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 853 |
GSM733715_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 854 |
GSM977045_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 855 |
GSM605629_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 856 |
GSM935339_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 857 |
GSM803491_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 858 |
GSM923442_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 859 |
GSM830537_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 860 |
GSM816661_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 861 |
GSM931361_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 862 |
GSM803381_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 863 |
GSM935641_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 864 |
GSM935404_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 865 |
GSM803360_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 866 |
GSM733732_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 867 |
GSM803408_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 868 |
GSM803482_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 869 |
GSM822314_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 870 |
GSM945214_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 871 |
GSM816655_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 872 |
GSM897082_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 873 |
GSM758560_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 874 |
GSM849337_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 875 |
GSM736558_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 876 |
GSM849366_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 877 |
GSM822267_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 878 |
GSM831031_1 Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters. Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)). Reads were extended to 200 bp using the -e parameter, otherwise defaults were used. The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp. |
| 879 |
GSM849362_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 880 |
GSM816673_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 881 |
GSM767846_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 882 |
GSM646568_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 883 |
GSM803352_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 884 |
GSM831042_1 Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters. Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)). Reads were extended to 200 bp using the -e parameter, otherwise defaults were used. The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp. |
| 885 |
GSM803409_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 886 |
GSM831020_1 Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters. Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)). Reads were extended to 200 bp using the -e parameter, otherwise defaults were used. The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp. |
| 887 |
GSM749777_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 888 |
GSM803405_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 889 |
GSM736492_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 890 |
GSM646570_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 891 |
GSM923439_8 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 892 |
GSM935523_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 893 |
GSM736628_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 894 |
GSM803430_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 895 |
GSM945278_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 896 |
GSM973690_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 897 |
GSM646564_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 898 |
GSM733672_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 899 |
GSM945288_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 900 |
GSM923453_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 901 |
GSM923444_6 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 902 |
GSM749778_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 903 |
GSM831005_1 Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters. Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)). Reads were extended to 200 bp using the -e parameter, otherwise defaults were used. The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp. |
| 904 |
GSM923445_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 905 |
GSM749679_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 906 |
GSM736517_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 907 |
GSM816662_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 908 |
GSM945183_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 909 |
GSM803539_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 910 |
GSM945310_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 911 |
GSM958738_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq |
| 912 |
GSM803485_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 913 |
GSM803377_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 914 |
GSM736602_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 915 |
GSM803496_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 916 |
GSM864340_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 917 |
GSM765394_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 918 |
GSM935332_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 919 |
GSM923447_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 920 |
GSM803363_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 921 |
GSM945239_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 922 |
GSM897083_5 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 923 |
GSM830531_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 924 |
GSM803519_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 925 |
GSM788073_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhHistone |
| 926 |
GSM935314_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 927 |
GSM973672_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 928 |
GSM830530_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 929 |
GSM733687_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 930 |
GSM822277_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 931 |
GSM605630_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 932 |
GSM803363_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 933 |
GSM935283_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 934 |
GSM935419_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 935 |
GSM803367_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 936 |
GSM935323_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 937 |
GSM935378_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 938 |
GSM830537_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 939 |
GSM733781_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 940 |
GSM864342_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 941 |
GSM945239_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 942 |
GSM803373_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 943 |
GSM973678_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 944 |
GSM765386_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 945 |
GSM803528_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 946 |
GSM803388_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 947 |
GSM945172_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 948 |
GSM923444_15 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 949 |
GSM977043_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 950 |
GSM767845_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 951 |
GSM935349_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 952 |
GSM767842_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 953 |
GSM605625_5 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 954 |
GSM822277_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 955 |
GSM788080_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhHistone |
| 956 |
GSM935538_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 957 |
GSM788086_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhHistone |
| 958 |
GSM831028_1 Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters. Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)). Reads were extended to 200 bp using the -e parameter, otherwise defaults were used. The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp. |
| 959 |
GSM733741_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 960 |
GSM935514_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 961 |
GSM736502_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 962 |
GSM672836_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaSeq |
| 963 |
GSM736631_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 964 |
GSM767854_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 965 |
GSM831038_1 Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters. Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)). Reads were extended to 200 bp using the -e parameter, otherwise defaults were used. The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp. |
| 966 |
GSM935566_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 967 |
GSM935623_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 968 |
GSM803425_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 969 |
GSM605628_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 970 |
GSM749722_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 971 |
GSM831007_1 Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters. Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)). Reads were extended to 200 bp using the -e parameter, otherwise defaults were used. The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp. |
| 972 |
GSM803465_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 973 |
GSM758575_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 974 |
GSM897081_6 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 975 |
GSM803422_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 976 |
GSM803483_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 977 |
GSM767856_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 978 |
GSM733716_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 979 |
GSM803508_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 980 |
GSM822276_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 981 |
GSM816647_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 982 |
GSM816651_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 983 |
GSM816642_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 984 |
GSM749754_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 985 |
GSM803473_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 986 |
GSM945222_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 987 |
GSM945245_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 988 |
GSM803463_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 989 |
GSM864353_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 990 |
GSM803503_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 991 |
GSM935383_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 992 |
GSM803407_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 993 |
GSM958731_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq |
| 994 |
GSM736547_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 995 |
GSM803414_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 996 |
GSM822286_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 997 |
GSM803441_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 998 |
GSM605629_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 999 |
GSM733783_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 1000 |
GSM803341_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1001 |
GSM733776_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 1002 |
GSM935367_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1003 |
GSM945163_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1004 |
GSM977036_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1005 |
GSM749699_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 1006 |
GSM736582_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 1007 |
GSM958745_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq |
| 1008 |
GSM736536_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 1009 |
GSM803439_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1010 |
GSM945278_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1011 |
GSM830529_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 1012 |
GSM605632_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1013 |
GSM646560_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 1014 |
GSM803511_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1015 |
GSM758571_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1016 |
GSM923451_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 1017 |
GSM958732_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq |
| 1018 |
GSM958741_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq |
| 1019 |
GSM816656_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 1020 |
GSM736538_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 1021 |
GSM818828_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhHistone |
| 1022 |
GSM758560_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1023 |
GSM736528_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 1024 |
GSM803459_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1025 |
GSM736568_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 1026 |
GSM733771_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 1027 |
GSM803348_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1028 |
GSM935447_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1029 |
GSM935369_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1030 |
GSM733673_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 1031 |
GSM944519_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSunyRipSeq |
| 1032 |
GSM973666_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1033 |
GSM977032_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1034 |
GSM749745_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 1035 |
GSM849364_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 1036 |
GSM977029_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1037 |
GSM849362_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 1038 |
GSM945236_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1039 |
GSM736563_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 1040 |
GSM736519_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 1041 |
GSM831010_1 Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters. Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)). Reads were extended to 200 bp using the -e parameter, otherwise defaults were used. The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp. |
| 1042 |
GSM945260_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1043 |
GSM816645_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 1044 |
GSM923450_7 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 1045 |
GSM646565_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 1046 |
GSM935480_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1047 |
GSM897081_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1048 |
GSM935449_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1049 |
GSM935486_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1050 |
GSM830995_1 Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters. Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)). Reads were extended to 200 bp using the -e parameter, otherwise defaults were used. The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp. |
| 1051 |
GSM973692_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1052 |
GSM749671_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 1053 |
GSM803530_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1054 |
GSM945180_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1055 |
GSM767840_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1056 |
GSM803380_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1057 |
GSM803464_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1058 |
GSM923442_8 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 1059 |
GSM767848_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1060 |
GSM749734_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 1061 |
GSM816658_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 1062 |
GSM767841_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1063 |
GSM935388_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1064 |
GSM849324_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 1065 |
GSM803336_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1066 |
GSM803407_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1067 |
GSM736616_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 1068 |
GSM803481_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1069 |
GSM849339_6 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 1070 |
GSM758559_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1071 |
GSM803462_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1072 |
GSM977033_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1073 |
GSM945224_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1074 |
GSM803418_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1075 |
GSM803350_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1076 |
GSM945325_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1077 |
GSM935374_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1078 |
GSM749680_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 1079 |
GSM973669_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1080 |
GSM923447_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 1081 |
GSM736600_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 1082 |
GSM977033_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1083 |
GSM767844_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1084 |
GSM935561_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1085 |
GSM977049_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1086 |
GSM733773_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 1087 |
GSM945194_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1088 |
GSM733724_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 1089 |
GSM803389_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1090 |
GSM958730_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq |
| 1091 |
GSM736525_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 1092 |
GSM765393_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1093 |
GSM935272_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1094 |
GSM849360_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 1095 |
GSM977038_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1096 |
GSM977046_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1097 |
GSM831037_1 Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters. Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)). Reads were extended to 200 bp using the -e parameter, otherwise defaults were used. The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp. |
| 1098 |
GSM816635_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 1099 |
GSM605632_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1100 |
GSM923448_6 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 1101 |
GSM822291_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 1102 |
GSM945283_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1103 |
GSM897075_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1104 |
GSM822310_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 1105 |
GSM736601_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 1106 |
GSM849354_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 1107 |
GSM733714_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 1108 |
GSM736575_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 1109 |
GSM897083_6 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1110 |
GSM749737_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 1111 |
GSM777639_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUchicagoTfbs |
| 1112 |
GSM767853_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1113 |
GSM736583_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 1114 |
GSM733682_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 1115 |
GSM945232_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1116 |
GSM733647_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 1117 |
GSM816643_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 1118 |
GSM803512_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1119 |
GSM822279_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 1120 |
GSM733761_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 1121 |
GSM945282_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1122 |
GSM758572_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1123 |
GSM849028_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 1124 |
GSM897073_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1125 |
GSM822273_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 1126 |
GSM935618_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1127 |
GSM849341_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 1128 |
GSM897072_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1129 |
GSM803479_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1130 |
GSM736524_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 1131 |
GSM803516_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1132 |
GSM831030_1 Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters. Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)). Reads were extended to 200 bp using the -e parameter, otherwise defaults were used. The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp. |
| 1133 |
GSM958730_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq |
| 1134 |
GSM945854_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhHistone |
| 1135 |
GSM977035_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1136 |
GSM923442_5 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 1137 |
GSM849334_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 1138 |
GSM803536_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1139 |
GSM749755_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 1140 |
GSM758561_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1141 |
GSM945216_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1142 |
GSM977032_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1143 |
GSM788071_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhHistone |
| 1144 |
GSM849351_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 1145 |
GSM758574_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1146 |
GSM803449_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1147 |
GSM767847_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1148 |
GSM767857_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1149 |
GSM733659_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 1150 |
GSM758567_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1151 |
GSM816626_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 1152 |
GSM958737_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq |
| 1153 |
GSM945196_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1154 |
GSM749753_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 1155 |
GSM897078_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1156 |
GSM958728_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq |
| 1157 |
GSM945268_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1158 |
GSM923445_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 1159 |
GSM733694_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 1160 |
GSM864344_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 1161 |
GSM923453_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 1162 |
GSM803513_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1163 |
GSM733750_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 1164 |
GSM767855_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1165 |
GSM973669_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1166 |
GSM945300_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1167 |
GSM803505_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1168 |
GSM736590_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 1169 |
GSM973673_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1170 |
GSM945204_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1171 |
GSM788078_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhHistone |
| 1172 |
GSM765391_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1173 |
GSM777638_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUchicagoTfbs |
| 1174 |
GSM923447_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 1175 |
GSM923433_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq |
| 1176 |
GSM836272_1 Software=Bowtie, Cufflinks |
| 1177 |
GSM977047_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1178 |
GSM822306_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 1179 |
GSM958750_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq |
| 1180 |
GSM897078_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1181 |
GSM977035_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1182 |
GSM765395_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1183 |
GSM803427_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1184 |
GSM733759_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 1185 |
GSM935421_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1186 |
GSM973682_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1187 |
GSM736612_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 1188 |
GSM803402_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1189 |
GSM765386_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1190 |
GSM803484_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1191 |
GSM849327_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 1192 |
GSM803495_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1193 |
GSM736511_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 1194 |
GSM935630_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1195 |
GSM945313_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1196 |
GSM935273_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1197 |
GSM749695_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 1198 |
GSM935277_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1199 |
GSM816632_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 1200 |
GSM923451_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 1201 |
GSM849025_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 1202 |
GSM803403_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1203 |
GSM849329_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 1204 |
GSM944526_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSunyRipSeq |
| 1205 |
GSM765388_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1206 |
GSM935331_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1207 |
GSM973689_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1208 |
GSM803520_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1209 |
GSM977051_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1210 |
GSM816628_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 1211 |
GSM945266_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1212 |
GSM935336_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1213 |
GSM758577_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1214 |
GSM803382_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1215 |
GSM945211_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1216 |
GSM765400_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1217 |
GSM935522_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1218 |
GSM935403_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1219 |
GSM803351_5 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1220 |
GSM803541_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1221 |
GSM945169_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1222 |
GSM935652_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1223 |
GSM977036_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1224 |
GSM849368_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 1225 |
GSM749715_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 1226 |
GSM803338_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1227 |
GSM803338_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1228 |
GSM849358_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 1229 |
GSM935415_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1230 |
GSM803498_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1231 |
GSM945175_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1232 |
GSM977036_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1233 |
GSM803486_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1234 |
GSM945213_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1235 |
GSM849349_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 1236 |
GSM935645_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1237 |
GSM945284_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1238 |
GSM864359_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 1239 |
GSM897075_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1240 |
GSM803337_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1241 |
GSM935563_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1242 |
GSM973674_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1243 |
GSM849338_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 1244 |
GSM973691_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1245 |
GSM977034_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1246 |
GSM973674_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1247 |
GSM749772_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 1248 |
GSM733711_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 1249 |
GSM803405_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1250 |
GSM935512_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1251 |
GSM864345_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 1252 |
GSM945240_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1253 |
GSM816659_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 1254 |
GSM765394_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1255 |
GSM923442_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 1256 |
GSM803501_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1257 |
GSM935571_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1258 |
GSM923444_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 1259 |
GSM973680_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1260 |
GSM733768_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 1261 |
GSM830521_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 1262 |
GSM897086_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1263 |
GSM849324_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 1264 |
GSM849336_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 1265 |
GSM958728_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq |
| 1266 |
GSM605625_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1267 |
GSM733651_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 1268 |
GSM945316_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1269 |
GSM945267_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1270 |
GSM945174_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1271 |
GSM803358_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1272 |
GSM849354_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 1273 |
GSM945276_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1274 |
GSM765404_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1275 |
GSM758564_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1276 |
GSM923441_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 1277 |
GSM803542_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1278 |
GSM803370_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1279 |
GSM822270_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 1280 |
GSM945271_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1281 |
GSM736571_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 1282 |
GSM803515_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1283 |
GSM945247_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1284 |
GSM803504_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1285 |
GSM897072_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1286 |
GSM749685_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 1287 |
GSM977037_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1288 |
GSM831014_1 Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters. Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)). Reads were extended to 200 bp using the -e parameter, otherwise defaults were used. The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp. |
| 1289 |
GSM973677_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1290 |
GSM749736_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 1291 |
GSM944521_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSunyRipSeq |
| 1292 |
GSM767842_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1293 |
GSM849358_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 1294 |
GSM945198_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1295 |
GSM767853_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1296 |
GSM945312_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1297 |
GSM945271_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1298 |
GSM803398_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1299 |
GSM977028_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1300 |
GSM958748_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq |
| 1301 |
GSM605633_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1302 |
GSM935632_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1303 |
GSM758568_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1304 |
GSM864344_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 1305 |
GSM803437_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1306 |
GSM803399_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1307 |
GSM945193_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1308 |
GSM803530_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1309 |
GSM803384_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1310 |
GSM923418_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq |
| 1311 |
GSM758577_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1312 |
GSM803458_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1313 |
GSM803531_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1314 |
GSM973668_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1315 |
GSM765402_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1316 |
GSM973684_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1317 |
GSM935584_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1318 |
GSM945296_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1319 |
GSM935488_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1320 |
GSM803527_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1321 |
GSM733735_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 1322 |
GSM736531_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 1323 |
GSM935548_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1324 |
GSM849366_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 1325 |
GSM803334_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1326 |
GSM736549_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 1327 |
GSM803353_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1328 |
GSM831043_1 Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters. Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)). Reads were extended to 200 bp using the -e parameter, otherwise defaults were used. The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp. |
| 1329 |
GSM973675_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1330 |
GSM923446_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 1331 |
GSM945204_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1332 |
GSM831003_1 Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters. Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)). Reads were extended to 200 bp using the -e parameter, otherwise defaults were used. The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp. |
| 1333 |
GSM935373_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1334 |
GSM758566_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1335 |
GSM935320_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1336 |
GSM758578_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1337 |
GSM935586_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1338 |
GSM935628_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1339 |
GSM935587_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1340 |
GSM733644_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 1341 |
GSM818827_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhHistone |
| 1342 |
GSM935451_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1343 |
GSM803451_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1344 |
GSM973689_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1345 |
GSM803386_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1346 |
GSM803388_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1347 |
GSM830521_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 1348 |
GSM803506_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1349 |
GSM736516_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 1350 |
GSM767853_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1351 |
GSM733688_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 1352 |
GSM945182_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1353 |
GSM816646_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 1354 |
GSM749726_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 1355 |
GSM935550_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1356 |
GSM733676_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 1357 |
GSM765391_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1358 |
GSM973669_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1359 |
GSM736608_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 1360 |
GSM788084_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhHistone |
| 1361 |
GSM733755_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 1362 |
GSM822271_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 1363 |
GSM935446_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1364 |
GSM736537_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 1365 |
GSM958735_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq |
| 1366 |
GSM803349_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1367 |
GSM736554_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 1368 |
GSM830535_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 1369 |
GSM923443_8 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 1370 |
GSM836273_1 Software=Bowtie, Cufflinks |
| 1371 |
GSM803443_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1372 |
GSM977052_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1373 |
GSM935464_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1374 |
GSM767850_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1375 |
GSM749669_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 1376 |
GSM803470_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1377 |
GSM958751_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq |
| 1378 |
GSM836270_1 Software=Bowtie, Cufflinks |
| 1379 |
GSM945159_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1380 |
GSM803514_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1381 |
GSM736542_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 1382 |
GSM935359_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1383 |
GSM605633_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1384 |
GSM758572_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1385 |
GSM736535_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 1386 |
GSM816671_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 1387 |
GSM803521_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1388 |
GSM803335_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1389 |
GSM923435_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq |
| 1390 |
GSM736569_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 1391 |
GSM977040_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1392 |
GSM803440_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1393 |
GSM923449_5 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 1394 |
GSM945272_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1395 |
GSM923452_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 1396 |
GSM733772_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 1397 |
GSM897082_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1398 |
GSM977029_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1399 |
GSM733728_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 1400 |
GSM935322_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1401 |
GSM816642_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 1402 |
GSM803345_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1403 |
GSM923437_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq |
| 1404 |
GSM849327_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 1405 |
GSM822286_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 1406 |
GSM945191_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1407 |
GSM935579_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1408 |
GSM945320_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1409 |
GSM831022_1 Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters. Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)). Reads were extended to 200 bp using the -e parameter, otherwise defaults were used. The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp. |
| 1410 |
GSM798322_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 1411 |
GSM849346_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 1412 |
GSM923451_7 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 1413 |
GSM945322_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1414 |
GSM973689_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1415 |
GSM945857_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhHistone |
| 1416 |
GSM803535_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1417 |
GSM765398_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1418 |
GSM767854_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1419 |
GSM831035_1 Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters. Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)). Reads were extended to 200 bp using the -e parameter, otherwise defaults were used. The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp. |
| 1420 |
GSM736625_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 1421 |
GSM973683_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1422 |
GSM736620_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 1423 |
GSM822313_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 1424 |
GSM816640_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 1425 |
GSM958734_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq |
| 1426 |
GSM849368_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 1427 |
GSM977046_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1428 |
GSM736550_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 1429 |
GSM935505_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1430 |
GSM749738_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 1431 |
GSM803453_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1432 |
GSM803351_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1433 |
GSM765399_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1434 |
GSM803374_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1435 |
GSM816437_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1436 |
GSM749763_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 1437 |
GSM605635_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1438 |
GSM973686_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1439 |
GSM923452_6 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 1440 |
GSM977044_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1441 |
GSM973690_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1442 |
GSM605632_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1443 |
GSM733653_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 1444 |
GSM816631_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 1445 |
GSM935279_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1446 |
GSM935649_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1447 |
GSM977039_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1448 |
GSM973684_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1449 |
GSM758562_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1450 |
GSM973673_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1451 |
GSM897073_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1452 |
GSM803419_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1453 |
GSM897079_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1454 |
GSM864338_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 1455 |
GSM733767_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 1456 |
GSM849339_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 1457 |
GSM897075_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1458 |
GSM803541_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1459 |
GSM816665_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 1460 |
GSM803379_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1461 |
GSM749684_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 1462 |
GSM803414_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1463 |
GSM923447_6 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 1464 |
GSM945212_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1465 |
GSM749743_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 1466 |
GSM765402_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1467 |
GSM605625_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1468 |
GSM935473_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1469 |
GSM803529_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1470 |
GSM831015_1 Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters. Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)). Reads were extended to 200 bp using the -e parameter, otherwise defaults were used. The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp. |
| 1471 |
GSM646563_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 1472 |
GSM849334_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 1473 |
GSM945178_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1474 |
GSM935470_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1475 |
GSM803515_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1476 |
GSM977030_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1477 |
GSM803353_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1478 |
GSM758561_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1479 |
GSM897082_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1480 |
GSM803369_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1481 |
GSM803377_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1482 |
GSM816627_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 1483 |
GSM945279_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1484 |
GSM803333_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1485 |
GSM803500_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1486 |
GSM803424_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1487 |
GSM767843_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1488 |
GSM945324_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1489 |
GSM803350_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1490 |
GSM945292_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1491 |
GSM822289_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 1492 |
GSM923425_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq |
| 1493 |
GSM803473_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1494 |
GSM935307_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1495 |
GSM849364_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 1496 |
GSM935453_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1497 |
GSM608167_1 Alignment=Sequence reads were obtained and mapped to the human genome assembly hg18 (March, 2006) or hg19 (February, 2009) using the Illumina Genome Analyzer Pipeline. All reads mapping with two or fewer mismatches were retained and read starts were summed in sliding windows of 400 bp to create summary windows.; Peak Calling=Peaks were called with Sole-Search (http://chipseq.genomecenter.ucdavis.edu/cgi-bin/chipseq.cgi) |
| 1498 |
GSM977034_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1499 |
GSM749773_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 1500 |
GSM646562_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 1501 |
GSM803393_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1502 |
GSM973687_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1503 |
GSM605634_5 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1504 |
GSM973673_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1505 |
GSM945227_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1506 |
GSM803444_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1507 |
GSM923452_8 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 1508 |
GSM733769_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 1509 |
GSM749735_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 1510 |
GSM758572_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1511 |
GSM822291_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 1512 |
GSM923444_11 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 1513 |
GSM830536_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 1514 |
GSM736606_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 1515 |
GSM758559_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1516 |
GSM945229_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1517 |
GSM749742_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 1518 |
GSM749678_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 1519 |
GSM958737_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq |
| 1520 |
GSM945226_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1521 |
GSM958745_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq |
| 1522 |
GSM733670_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 1523 |
GSM923445_6 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 1524 |
GSM945237_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1525 |
GSM818744_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1526 |
GSM803439_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1527 |
GSM935442_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1528 |
GSM733718_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 1529 |
GSM864351_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 1530 |
GSM973663_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1531 |
GSM849330_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 1532 |
GSM847562_1 Software=Bowtie, Cufflinks |
| 1533 |
GSM758563_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1534 |
GSM935363_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1535 |
GSM977038_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1536 |
GSM840138_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1537 |
GSM973667_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1538 |
GSM935309_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1539 |
GSM973674_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1540 |
GSM803474_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1541 |
GSM767843_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1542 |
GSM830524_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 1543 |
GSM803410_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1544 |
GSM977047_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1545 |
GSM767851_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1546 |
GSM945296_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1547 |
GSM973665_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1548 |
GSM945265_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1549 |
GSM822301_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 1550 |
GSM767847_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1551 |
GSM803523_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1552 |
GSM935460_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1553 |
GSM935483_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1554 |
GSM958738_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq |
| 1555 |
GSM923431_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq |
| 1556 |
GSM935503_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1557 |
GSM849331_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 1558 |
GSM822309_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 1559 |
GSM923440_7 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 1560 |
GSM922955_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhRnaSeq |
| 1561 |
GSM749730_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 1562 |
GSM945221_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1563 |
GSM945175_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1564 |
GSM958731_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq |
| 1565 |
GSM765405_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1566 |
GSM958740_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq |
| 1567 |
GSM777640_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUchicagoTfbs |
| 1568 |
GSM733757_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 1569 |
GSM765399_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1570 |
GSM945277_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1571 |
GSM767850_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1572 |
GSM733720_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 1573 |
GSM945244_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1574 |
GSM935646_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1575 |
GSM736565_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 1576 |
GSM803527_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1577 |
GSM803457_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1578 |
GSM977051_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1579 |
GSM822284_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 1580 |
GSM803489_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1581 |
GSM758575_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1582 |
GSM736544_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 1583 |
GSM803489_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1584 |
GSM830534_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 1585 |
GSM923429_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq |
| 1586 |
GSM849362_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 1587 |
GSM935476_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1588 |
GSM935599_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1589 |
GSM935511_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1590 |
GSM944519_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSunyRipSeq |
| 1591 |
GSM864346_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 1592 |
GSM973693_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1593 |
GSM973680_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1594 |
GSM923441_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 1595 |
GSM822298_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 1596 |
GSM923444_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 1597 |
GSM831002_1 Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters. Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)). Reads were extended to 200 bp using the -e parameter, otherwise defaults were used. The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp. |
| 1598 |
GSM765401_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1599 |
GSM765391_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1600 |
GSM849330_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 1601 |
GSM803395_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1602 |
GSM803524_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1603 |
GSM923432_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq |
| 1604 |
GSM767851_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1605 |
GSM803373_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1606 |
GSM816653_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 1607 |
GSM749750_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 1608 |
GSM958739_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq |
| 1609 |
GSM605629_5 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1610 |
GSM765392_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1611 |
GSM973688_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1612 |
GSM973668_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1613 |
GSM736610_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 1614 |
GSM765403_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1615 |
GSM788081_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhHistone |
| 1616 |
GSM767847_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1617 |
GSM736493_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 1618 |
GSM935605_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1619 |
GSM945267_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1620 |
GSM767854_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1621 |
GSM758573_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1622 |
GSM977035_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1623 |
GSM977040_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1624 |
GSM944523_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSunyRipSeq |
| 1625 |
GSM765386_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1626 |
GSM935291_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1627 |
GSM935358_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1628 |
GSM897086_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1629 |
GSM765389_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1630 |
GSM822299_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 1631 |
GSM803384_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1632 |
GSM822273_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 1633 |
GSM849339_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 1634 |
GSM945251_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1635 |
GSM733707_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 1636 |
GSM803346_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1637 |
GSM944524_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSunyRipSeq |
| 1638 |
GSM803525_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1639 |
GSM849302_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 1640 |
GSM945299_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1641 |
GSM803340_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1642 |
GSM803521_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1643 |
GSM935292_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1644 |
GSM935352_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1645 |
GSM945269_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1646 |
GSM803403_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1647 |
GSM749764_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 1648 |
GSM945188_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1649 |
GSM831021_1 Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters. Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)). Reads were extended to 200 bp using the -e parameter, otherwise defaults were used. The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp. |
| 1650 |
GSM945269_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1651 |
GSM977030_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1652 |
GSM945170_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1653 |
GSM864361_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 1654 |
GSM733770_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 1655 |
GSM973678_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1656 |
GSM923422_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq |
| 1657 |
GSM958739_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq |
| 1658 |
GSM736614_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 1659 |
GSM973665_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1660 |
GSM765394_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1661 |
GSM935575_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1662 |
GSM758576_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1663 |
GSM736497_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 1664 |
GSM923444_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 1665 |
GSM944521_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSunyRipSeq |
| 1666 |
GSM849357_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 1667 |
GSM803383_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1668 |
GSM849305_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 1669 |
GSM897083_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1670 |
GSM945255_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1671 |
GSM758570_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1672 |
GSM736505_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 1673 |
GSM849359_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 1674 |
GSM849305_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 1675 |
GSM945192_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1676 |
GSM945291_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1677 |
GSM765402_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1678 |
GSM840136_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1679 |
GSM822285_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 1680 |
GSM923444_7 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 1681 |
GSM849357_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 1682 |
GSM864343_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 1683 |
GSM788083_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhHistone |
| 1684 |
GSM816644_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 1685 |
GSM758563_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1686 |
GSM803512_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1687 |
GSM935501_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1688 |
GSM736553_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 1689 |
GSM803538_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1690 |
GSM736626_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 1691 |
GSM897071_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1692 |
GSM945270_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1693 |
GSM733725_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 1694 |
GSM765394_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1695 |
GSM977034_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1696 |
GSM736581_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 1697 |
GSM736510_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 1698 |
GSM935513_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1699 |
GSM803466_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1700 |
GSM849330_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 1701 |
GSM803425_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1702 |
GSM788079_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhHistone |
| 1703 |
GSM935610_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1704 |
GSM849349_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 1705 |
GSM803455_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1706 |
GSM605633_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1707 |
GSM840136_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1708 |
GSM849344_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 1709 |
GSM758564_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1710 |
GSM935437_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1711 |
GSM803360_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1712 |
GSM822278_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 1713 |
GSM816628_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 1714 |
GSM803424_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1715 |
GSM897083_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1716 |
GSM736546_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 1717 |
GSM803361_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1718 |
GSM803502_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1719 |
GSM958737_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq |
| 1720 |
GSM973679_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1721 |
GSM803420_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1722 |
GSM923453_6 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 1723 |
GSM803371_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1724 |
GSM973679_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1725 |
GSM935478_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1726 |
GSM849342_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 1727 |
GSM758569_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1728 |
GSM803385_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1729 |
GSM765398_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1730 |
GSM935311_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1731 |
GSM816633_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 1732 |
GSM758569_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1733 |
GSM749665_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 1734 |
GSM945165_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1735 |
GSM816638_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 1736 |
GSM736585_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 1737 |
GSM830532_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 1738 |
GSM758575_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1739 |
GSM733758_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 1740 |
GSM847565_1 Software=Bowtie, Cufflinks |
| 1741 |
GSM923439_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 1742 |
GSM958733_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq |
| 1743 |
GSM767851_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1744 |
GSM758567_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1745 |
GSM897074_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1746 |
GSM803470_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1747 |
GSM803366_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1748 |
GSM736636_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 1749 |
GSM897070_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1750 |
GSM945166_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1751 |
GSM935546_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1752 |
GSM935497_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1753 |
GSM767852_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1754 |
GSM803375_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1755 |
GSM849350_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 1756 |
GSM849301_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 1757 |
GSM736635_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 1758 |
GSM758566_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1759 |
GSM646564_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 1760 |
GSM765390_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1761 |
GSM923452_7 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 1762 |
GSM935583_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1763 |
GSM973691_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1764 |
GSM758566_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1765 |
GSM831025_1 Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters. Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)). Reads were extended to 200 bp using the -e parameter, otherwise defaults were used. The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp. |
| 1766 |
GSM803400_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1767 |
GSM765396_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1768 |
GSM945279_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1769 |
GSM736638_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 1770 |
GSM803333_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1771 |
GSM646562_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 1772 |
GSM923440_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 1773 |
GSM923450_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 1774 |
GSM864355_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 1775 |
GSM923418_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq |
| 1776 |
GSM736593_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 1777 |
GSM749748_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 1778 |
GSM945320_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1779 |
GSM803477_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1780 |
GSM736527_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 1781 |
GSM977043_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1782 |
GSM945303_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1783 |
GSM803499_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1784 |
GSM605628_5 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1785 |
GSM849031_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 1786 |
GSM733727_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 1787 |
GSM935335_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1788 |
GSM945241_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1789 |
GSM736584_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 1790 |
GSM758570_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1791 |
GSM945306_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1792 |
GSM816664_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 1793 |
GSM816641_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 1794 |
GSM803432_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1795 |
GSM822302_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 1796 |
GSM945217_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1797 |
GSM803440_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1798 |
GSM935337_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1799 |
GSM973662_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1800 |
GSM736627_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 1801 |
GSM849325_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 1802 |
GSM749728_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 1803 |
GSM803494_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1804 |
GSM605634_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1805 |
GSM945199_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1806 |
GSM822305_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 1807 |
GSM749729_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 1808 |
GSM758578_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1809 |
GSM945215_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1810 |
GSM958740_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq |
| 1811 |
GSM935356_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1812 |
GSM767850_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1813 |
GSM736576_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 1814 |
GSM849339_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 1815 |
GSM935591_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1816 |
GSM749702_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 1817 |
GSM977049_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1818 |
GSM945215_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1819 |
GSM847564_1 Software=Bowtie, Cufflinks |
| 1820 |
GSM736539_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 1821 |
GSM830530_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 1822 |
GSM816658_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 1823 |
GSM749700_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 1824 |
GSM758562_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1825 |
GSM803419_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1826 |
GSM803483_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1827 |
GSM605632_6 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1828 |
GSM923450_6 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 1829 |
GSM749713_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 1830 |
GSM973664_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1831 |
GSM945298_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1832 |
GSM733764_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 1833 |
GSM816631_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 1834 |
GSM803497_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1835 |
GSM818826_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhHistone |
| 1836 |
GSM749673_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 1837 |
GSM733736_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 1838 |
GSM803488_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1839 |
GSM935489_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1840 |
GSM758567_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1841 |
GSM935466_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1842 |
GSM973681_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1843 |
GSM977041_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1844 |
GSM935304_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1845 |
GSM803525_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1846 |
GSM749701_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 1847 |
GSM816634_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 1848 |
GSM935534_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1849 |
GSM736592_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 1850 |
GSM935316_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1851 |
GSM897073_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1852 |
GSM803497_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1853 |
GSM822282_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 1854 |
GSM847561_1 Software=Bowtie, Cufflinks |
| 1855 |
GSM935351_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1856 |
GSM897081_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1857 |
GSM973693_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1858 |
GSM733762_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 1859 |
GSM923448_8 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 1860 |
GSM920558_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhNsome |
| 1861 |
GSM765397_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1862 |
GSM803357_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1863 |
GSM945159_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1864 |
GSM816638_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 1865 |
GSM605627_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1866 |
GSM897081_5 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1867 |
GSM977042_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1868 |
GSM749721_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 1869 |
GSM765401_5 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1870 |
GSM923443_6 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 1871 |
GSM864341_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 1872 |
GSM935598_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1873 |
GSM923441_7 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 1874 |
GSM803521_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1875 |
GSM864337_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 1876 |
GSM935414_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1877 |
GSM945200_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1878 |
GSM767844_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1879 |
GSM958742_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq |
| 1880 |
GSM945261_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1881 |
GSM945171_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1882 |
GSM733733_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 1883 |
GSM749741_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 1884 |
GSM605627_5 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1885 |
GSM849344_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 1886 |
GSM935596_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1887 |
GSM897070_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1888 |
GSM945214_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1889 |
GSM935519_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1890 |
GSM849359_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 1891 |
GSM973670_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1892 |
GSM646567_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 1893 |
GSM736624_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 1894 |
GSM977033_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1895 |
GSM935395_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1896 |
GSM816436_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1897 |
GSM945274_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1898 |
GSM831040_1 Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters. Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)). Reads were extended to 200 bp using the -e parameter, otherwise defaults were used. The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp. |
| 1899 |
GSM803480_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1900 |
GSM803517_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1901 |
GSM849336_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 1902 |
GSM646566_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 1903 |
GSM646569_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 1904 |
GSM803501_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1905 |
GSM864358_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 1906 |
GSM822280_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 1907 |
GSM803383_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1908 |
GSM736555_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 1909 |
GSM935508_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1910 |
GSM935340_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1911 |
GSM840137_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1912 |
GSM736594_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 1913 |
GSM803468_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1914 |
GSM973688_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1915 |
GSM749720_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 1916 |
GSM803423_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1917 |
GSM849030_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 1918 |
GSM945285_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1919 |
GSM803468_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1920 |
GSM803401_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1921 |
GSM945218_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1922 |
GSM803392_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1923 |
GSM973685_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1924 |
GSM736500_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 1925 |
GSM945307_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1926 |
GSM605634_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1927 |
GSM733748_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 1928 |
GSM897069_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1929 |
GSM733664_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 1930 |
GSM897083_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1931 |
GSM758562_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1932 |
GSM749770_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 1933 |
GSM973673_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1934 |
GSM765405_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1935 |
GSM749707_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 1936 |
GSM736591_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 1937 |
GSM849365_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 1938 |
GSM803362_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1939 |
GSM935502_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1940 |
GSM935406_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1941 |
GSM945855_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhHistone |
| 1942 |
GSM958733_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq |
| 1943 |
GSM935602_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1944 |
GSM935647_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1945 |
GSM849367_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 1946 |
GSM849358_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 1947 |
GSM749691_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 1948 |
GSM733695_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 1949 |
GSM923428_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq |
| 1950 |
GSM767846_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1951 |
GSM935275_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1952 |
GSM803445_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1953 |
GSM803490_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1954 |
GSM803369_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1955 |
GSM864348_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 1956 |
GSM816667_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 1957 |
GSM977028_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1958 |
GSM816635_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 1959 |
GSM945233_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1960 |
GSM973683_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1961 |
GSM864349_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 1962 |
GSM864356_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 1963 |
GSM923449_7 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 1964 |
GSM803341_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1965 |
GSM749682_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 1966 |
GSM816649_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 1967 |
GSM816663_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 1968 |
GSM749674_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 1969 |
GSM945304_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1970 |
GSM945219_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1971 |
GSM749670_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 1972 |
GSM803450_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1973 |
GSM945229_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1974 |
GSM973669_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1975 |
GSM733779_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 1976 |
GSM803496_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1977 |
GSM758576_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1978 |
GSM765396_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1979 |
GSM973687_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1980 |
GSM973688_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1981 |
GSM758569_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1982 |
GSM922957_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhRnaSeq |
| 1983 |
GSM958736_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq |
| 1984 |
GSM935608_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 1985 |
GSM923442_6 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 1986 |
GSM733702_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 1987 |
GSM849348_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 1988 |
GSM945264_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1989 |
GSM803450_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1990 |
GSM945254_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 1991 |
GSM803344_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 1992 |
GSM733775_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 1993 |
GSM923448_5 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 1994 |
GSM864339_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 1995 |
GSM767848_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 1996 |
GSM830531_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 1997 |
GSM977051_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1998 |
GSM973663_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 1999 |
GSM765400_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2000 |
GSM605625_6 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2001 |
GSM816663_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 2002 |
GSM897076_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2003 |
GSM803447_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2004 |
GSM803472_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2005 |
GSM945295_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2006 |
GSM897080_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2007 |
GSM977050_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2008 |
GSM765389_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2009 |
GSM849357_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 2010 |
GSM977047_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2011 |
GSM736533_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 2012 |
GSM733743_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 2013 |
GSM803376_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2014 |
GSM935456_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2015 |
GSM958741_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq |
| 2016 |
GSM945256_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2017 |
GSM945181_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2018 |
GSM849359_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 2019 |
GSM935526_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2020 |
GSM733681_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 2021 |
GSM920557_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhNsome |
| 2022 |
GSM788074_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhHistone |
| 2023 |
GSM788072_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhHistone |
| 2024 |
GSM945858_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhHistone |
| 2025 |
GSM945308_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2026 |
GSM977028_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2027 |
GSM849352_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 2028 |
GSM935398_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2029 |
GSM672834_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaSeq |
| 2030 |
GSM605630_5 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2031 |
GSM788070_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhHistone |
| 2032 |
GSM749675_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 2033 |
GSM736529_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 2034 |
GSM608165_1 Alignment=Sequence reads were obtained and mapped to the human genome assembly hg18 (March, 2006) or hg19 (February, 2009) using the Illumina Genome Analyzer Pipeline. All reads mapping with two or fewer mismatches were retained and read starts were summed in sliding windows of 400 bp to create summary windows.; Peak Calling=Peaks were called with Sole-Search (http://chipseq.genomecenter.ucdavis.edu/cgi-bin/chipseq.cgi) |
| 2035 |
GSM958734_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq |
| 2036 |
GSM923443_5 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 2037 |
GSM935444_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2038 |
GSM897069_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2039 |
GSM646566_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 2040 |
GSM822276_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 2041 |
GSM935338_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2042 |
GSM935634_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2043 |
GSM749756_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 2044 |
GSM816640_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 2045 |
GSM935541_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2046 |
GSM935653_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2047 |
GSM749681_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 2048 |
GSM923439_5 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 2049 |
GSM935459_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2050 |
GSM749692_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 2051 |
GSM767851_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2052 |
GSM945231_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2053 |
GSM816673_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 2054 |
GSM816637_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 2055 |
GSM822270_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 2056 |
GSM958740_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq |
| 2057 |
GSM749696_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 2058 |
GSM945202_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2059 |
GSM958737_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq |
| 2060 |
GSM935450_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2061 |
GSM977050_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2062 |
GSM803514_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2063 |
GSM849327_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 2064 |
GSM958729_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq |
| 2065 |
GSM945859_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhHistone |
| 2066 |
GSM765398_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2067 |
GSM733671_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 2068 |
GSM831000_1 Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters. Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)). Reads were extended to 200 bp using the -e parameter, otherwise defaults were used. The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp. |
| 2069 |
GSM935482_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2070 |
GSM736605_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 2071 |
GSM765400_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2072 |
GSM803518_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2073 |
GSM945259_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2074 |
GSM733700_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 2075 |
GSM945257_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2076 |
GSM935578_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2077 |
GSM749774_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 2078 |
GSM945853_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhHistone |
| 2079 |
GSM935537_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2080 |
GSM945309_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2081 |
GSM803442_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2082 |
GSM816630_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 2083 |
GSM973680_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2084 |
GSM736566_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 2085 |
GSM923444_14 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 2086 |
GSM935325_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2087 |
GSM935417_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2088 |
GSM923440_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 2089 |
GSM765398_5 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2090 |
GSM935312_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2091 |
GSM758563_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2092 |
GSM803486_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2093 |
GSM758577_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2094 |
GSM803343_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2095 |
GSM935621_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2096 |
GSM758574_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2097 |
GSM935400_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2098 |
GSM923427_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq |
| 2099 |
GSM749697_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 2100 |
GSM733760_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 2101 |
GSM849333_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 2102 |
GSM935577_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2103 |
GSM923449_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 2104 |
GSM765393_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2105 |
GSM958730_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq |
| 2106 |
GSM803404_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2107 |
GSM736495_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 2108 |
GSM816672_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 2109 |
GSM822282_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 2110 |
GSM935615_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2111 |
GSM973666_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2112 |
GSM973693_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2113 |
GSM816662_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 2114 |
GSM935616_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2115 |
GSM923447_5 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 2116 |
GSM816627_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 2117 |
GSM958732_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq |
| 2118 |
GSM977044_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2119 |
GSM864351_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 2120 |
GSM749667_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 2121 |
GSM758568_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2122 |
GSM765403_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2123 |
GSM977029_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2124 |
GSM803397_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2125 |
GSM803416_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2126 |
GSM765392_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2127 |
GSM765403_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2128 |
GSM803406_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2129 |
GSM897084_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2130 |
GSM749718_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 2131 |
GSM970218_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhHistone |
| 2132 |
GSM935474_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2133 |
GSM830993_1 Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters. Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)). Reads were extended to 200 bp using the -e parameter, otherwise defaults were used. The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp. |
| 2134 |
GSM945244_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2135 |
GSM825711_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2136 |
GSM945314_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2137 |
GSM973670_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2138 |
GSM803352_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2139 |
GSM803474_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2140 |
GSM646565_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 2141 |
GSM758564_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2142 |
GSM736589_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 2143 |
GSM803522_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2144 |
GSM935529_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2145 |
GSM935485_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2146 |
GSM830999_1 Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters. Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)). Reads were extended to 200 bp using the -e parameter, otherwise defaults were used. The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp. |
| 2147 |
GSM849358_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 2148 |
GSM736508_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 2149 |
GSM803520_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2150 |
GSM822275_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 2151 |
GSM816667_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 2152 |
GSM958747_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq |
| 2153 |
GSM788088_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhHistone |
| 2154 |
GSM935636_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2155 |
GSM803458_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2156 |
GSM803533_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2157 |
GSM803540_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2158 |
GSM816657_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 2159 |
GSM923434_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq |
| 2160 |
GSM765399_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2161 |
GSM803477_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2162 |
GSM803391_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2163 |
GSM945302_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2164 |
GSM973691_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2165 |
GSM897070_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2166 |
GSM973684_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2167 |
GSM977044_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2168 |
GSM977030_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2169 |
GSM935576_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2170 |
GSM935487_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2171 |
GSM749771_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 2172 |
GSM935376_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2173 |
GSM758577_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2174 |
GSM803455_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2175 |
GSM864355_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 2176 |
GSM935432_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2177 |
GSM935635_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2178 |
GSM816648_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 2179 |
GSM935305_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2180 |
GSM765388_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2181 |
GSM864350_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 2182 |
GSM803507_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2183 |
GSM788085_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhHistone |
| 2184 |
GSM803411_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2185 |
GSM945189_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2186 |
GSM973677_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2187 |
GSM822278_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 2188 |
GSM758568_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2189 |
GSM923443_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 2190 |
GSM935557_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2191 |
GSM945323_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2192 |
GSM935477_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2193 |
GSM831013_1 Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters. Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)). Reads were extended to 200 bp using the -e parameter, otherwise defaults were used. The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp. |
| 2194 |
GSM733782_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 2195 |
GSM849332_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 2196 |
GSM945201_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2197 |
GSM935411_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2198 |
GSM605631_2 hg18=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg18&g=wgEncodeCshlShortRnaSeq; hg19=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2199 |
GSM935609_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2200 |
GSM935493_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2201 |
GSM923433_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq |
| 2202 |
GSM803400_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2203 |
GSM803386_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2204 |
GSM923439_6 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 2205 |
GSM803509_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2206 |
GSM733766_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 2207 |
GSM803462_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2208 |
GSM749703_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 2209 |
GSM977032_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2210 |
GSM849340_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 2211 |
GSM816648_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 2212 |
GSM733726_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 2213 |
GSM765387_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2214 |
GSM749744_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 2215 |
GSM749733_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 2216 |
GSM803510_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2217 |
GSM935567_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2218 |
GSM945166_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2219 |
GSM749725_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 2220 |
GSM945321_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2221 |
GSM765401_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2222 |
GSM958747_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq |
| 2223 |
GSM923452_5 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 2224 |
GSM923443_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 2225 |
GSM736534_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 2226 |
GSM923440_8 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 2227 |
GSM605631_1 hg18=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg18&g=wgEncodeCshlShortRnaSeq; hg19=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2228 |
GSM935556_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2229 |
GSM923419_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq |
| 2230 |
GSM803453_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2231 |
GSM803349_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2232 |
GSM944524_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSunyRipSeq |
| 2233 |
GSM945318_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2234 |
GSM736599_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 2235 |
GSM822274_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 2236 |
GSM803464_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2237 |
GSM736559_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 2238 |
GSM822274_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 2239 |
GSM935423_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2240 |
GSM605630_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2241 |
GSM849324_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 2242 |
GSM767845_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2243 |
GSM605634_6 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2244 |
GSM803335_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2245 |
GSM935344_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2246 |
GSM849029_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 2247 |
GSM849341_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 2248 |
GSM803531_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2249 |
GSM897080_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2250 |
GSM816668_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 2251 |
GSM822312_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 2252 |
GSM749683_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 2253 |
GSM935405_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2254 |
GSM897080_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2255 |
GSM945213_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2256 |
GSM973687_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2257 |
GSM935454_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2258 |
GSM831018_1 Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters. Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)). Reads were extended to 200 bp using the -e parameter, otherwise defaults were used. The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp. |
| 2259 |
GSM935409_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2260 |
GSM935308_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2261 |
GSM803344_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2262 |
GSM935318_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2263 |
GSM935343_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2264 |
GSM935392_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2265 |
GSM923444_16 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 2266 |
GSM935438_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2267 |
GSM935631_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2268 |
GSM849335_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 2269 |
GSM973661_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2270 |
GSM767847_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2271 |
GSM736634_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 2272 |
GSM816654_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 2273 |
GSM849304_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 2274 |
GSM935639_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2275 |
GSM935626_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2276 |
GSM849347_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 2277 |
GSM897085_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2278 |
GSM935407_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2279 |
GSM945319_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2280 |
GSM736633_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 2281 |
GSM923449_6 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 2282 |
GSM803431_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2283 |
GSM864343_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 2284 |
GSM803480_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2285 |
GSM736617_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 2286 |
GSM758571_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2287 |
GSM945263_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2288 |
GSM945182_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2289 |
GSM605629_6 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2290 |
GSM935629_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2291 |
GSM864357_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 2292 |
GSM935408_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2293 |
GSM822297_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 2294 |
GSM830998_1 Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters. Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)). Reads were extended to 200 bp using the -e parameter, otherwise defaults were used. The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp. |
| 2295 |
GSM803490_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2296 |
GSM958731_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq |
| 2297 |
GSM935582_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2298 |
GSM646559_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 2299 |
GSM822307_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 2300 |
GSM897077_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2301 |
GSM935467_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2302 |
GSM822308_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 2303 |
GSM923439_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 2304 |
GSM977029_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2305 |
GSM816650_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 2306 |
GSM935510_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2307 |
GSM935545_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2308 |
GSM847568_1 Software=Bowtie, Cufflinks |
| 2309 |
GSM803447_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2310 |
GSM935530_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2311 |
GSM816636_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 2312 |
GSM945179_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2313 |
GSM803375_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2314 |
GSM736532_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 2315 |
GSM945208_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2316 |
GSM733752_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 2317 |
GSM803395_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2318 |
GSM803351_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2319 |
GSM923426_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq |
| 2320 |
GSM849357_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 2321 |
GSM935560_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2322 |
GSM736540_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 2323 |
GSM923432_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq |
| 2324 |
GSM935431_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2325 |
GSM646569_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 2326 |
GSM977036_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2327 |
GSM830992_1 Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters. Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)). Reads were extended to 200 bp using the -e parameter, otherwise defaults were used. The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp. |
| 2328 |
GSM830996_1 Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters. Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)). Reads were extended to 200 bp using the -e parameter, otherwise defaults were used. The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp. |
| 2329 |
GSM736572_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 2330 |
GSM977045_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2331 |
GSM822311_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 2332 |
GSM765404_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2333 |
GSM977040_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2334 |
GSM923446_5 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 2335 |
GSM736567_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 2336 |
GSM897086_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2337 |
GSM945324_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2338 |
GSM830990_1 Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters. Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)). Reads were extended to 200 bp using the -e parameter, otherwise defaults were used. The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp. |
| 2339 |
GSM973678_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2340 |
GSM803368_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2341 |
GSM935590_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2342 |
GSM803381_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2343 |
GSM935568_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2344 |
GSM767849_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2345 |
GSM923424_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq |
| 2346 |
GSM736630_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 2347 |
GSM803441_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2348 |
GSM923439_7 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 2349 |
GSM767853_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2350 |
GSM733756_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 2351 |
GSM672833_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaSeq |
| 2352 |
GSM935572_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2353 |
GSM935370_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2354 |
GSM935350_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2355 |
GSM816669_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 2356 |
GSM736573_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 2357 |
GSM945181_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2358 |
GSM849332_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 2359 |
GSM803434_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2360 |
GSM733654_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 2361 |
GSM849025_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 2362 |
GSM945232_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2363 |
GSM945162_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2364 |
GSM945168_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2365 |
GSM605628_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2366 |
GSM733641_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 2367 |
GSM803361_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2368 |
GSM935531_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2369 |
GSM849368_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 2370 |
GSM935393_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2371 |
GSM788077_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhHistone |
| 2372 |
GSM736491_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 2373 |
GSM830989_1 Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters. Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)). Reads were extended to 200 bp using the -e parameter, otherwise defaults were used. The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp. |
| 2374 |
GSM923452_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 2375 |
GSM973690_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2376 |
GSM935430_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2377 |
GSM803446_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2378 |
GSM830525_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 2379 |
GSM935633_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2380 |
GSM945243_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2381 |
GSM945163_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2382 |
GSM758563_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2383 |
GSM973687_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2384 |
GSM977032_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2385 |
GSM935521_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2386 |
GSM749779_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 2387 |
GSM958743_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq |
| 2388 |
GSM923434_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq |
| 2389 |
GSM923449_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 2390 |
GSM749739_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 2391 |
GSM958749_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq |
| 2392 |
GSM803493_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2393 |
GSM923429_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq |
| 2394 |
GSM945187_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2395 |
GSM830994_1 Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters. Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)). Reads were extended to 200 bp using the -e parameter, otherwise defaults were used. The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp. |
| 2396 |
GSM973686_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2397 |
GSM605625_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2398 |
GSM923444_5 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 2399 |
GSM849303_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 2400 |
GSM733665_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 2401 |
GSM923443_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 2402 |
GSM733738_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 2403 |
GSM849339_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 2404 |
GSM935612_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2405 |
GSM849328_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 2406 |
GSM945265_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2407 |
GSM945220_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2408 |
GSM803471_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2409 |
GSM945315_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2410 |
GSM945253_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2411 |
GSM672836_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaSeq |
| 2412 |
GSM935345_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2413 |
GSM605629_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2414 |
GSM897081_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2415 |
GSM935410_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2416 |
GSM767856_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2417 |
GSM935506_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2418 |
GSM849329_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 2419 |
GSM765390_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2420 |
GSM736552_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 2421 |
GSM945228_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2422 |
GSM935520_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2423 |
GSM733649_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 2424 |
GSM749758_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 2425 |
GSM945184_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2426 |
GSM830529_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 2427 |
GSM831011_1 Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters. Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)). Reads were extended to 200 bp using the -e parameter, otherwise defaults were used. The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp. |
| 2428 |
GSM803461_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2429 |
GSM923441_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 2430 |
GSM923435_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq |
| 2431 |
GSM935330_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2432 |
GSM945275_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2433 |
GSM897078_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2434 |
GSM803378_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2435 |
GSM733747_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 2436 |
GSM945160_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2437 |
GSM944522_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSunyRipSeq |
| 2438 |
GSM973668_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2439 |
GSM749757_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 2440 |
GSM977033_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2441 |
GSM935355_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2442 |
GSM749711_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 2443 |
GSM803469_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2444 |
GSM923441_8 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 2445 |
GSM945286_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2446 |
GSM765393_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2447 |
GSM935365_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2448 |
GSM945321_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2449 |
GSM749746_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 2450 |
GSM977028_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2451 |
GSM803345_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2452 |
GSM736632_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 2453 |
GSM733754_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 2454 |
GSM935525_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2455 |
GSM935532_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2456 |
GSM923451_8 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 2457 |
GSM935620_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2458 |
GSM973661_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2459 |
GSM803347_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2460 |
GSM945223_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2461 |
GSM923448_7 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 2462 |
GSM830533_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 2463 |
GSM849335_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 2464 |
GSM849327_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 2465 |
GSM816655_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 2466 |
GSM816660_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 2467 |
GSM935380_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2468 |
GSM935361_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2469 |
GSM803426_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2470 |
GSM822308_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 2471 |
GSM733639_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 2472 |
GSM816665_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 2473 |
GSM816645_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 2474 |
GSM803342_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2475 |
GSM767849_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2476 |
GSM923427_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq |
| 2477 |
GSM970217_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhHistone |
| 2478 |
GSM736580_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 2479 |
GSM646567_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 2480 |
GSM864358_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 2481 |
GSM945238_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2482 |
GSM831001_1 Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters. Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)). Reads were extended to 200 bp using the -e parameter, otherwise defaults were used. The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp. |
| 2483 |
GSM840137_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2484 |
GSM816666_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 2485 |
GSM765402_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2486 |
GSM605626_2 hg18=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg18&g=wgEncodeCshlShortRnaSeq; hg19=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2487 |
GSM958744_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq |
| 2488 |
GSM830535_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 2489 |
GSM849351_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 2490 |
GSM803406_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2491 |
GSM897071_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2492 |
GSM733701_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 2493 |
GSM830523_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 2494 |
GSM758575_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2495 |
GSM945177_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2496 |
GSM758578_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2497 |
GSM736586_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 2498 |
GSM736588_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 2499 |
GSM803511_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2500 |
GSM830522_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 2501 |
GSM935606_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2502 |
GSM935573_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2503 |
GSM733763_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 2504 |
GSM945290_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2505 |
GSM822275_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 2506 |
GSM758576_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2507 |
GSM973664_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2508 |
GSM733667_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 2509 |
GSM733731_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 2510 |
GSM935588_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2511 |
GSM803376_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2512 |
GSM977052_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2513 |
GSM897081_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2514 |
GSM945164_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2515 |
GSM945317_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2516 |
GSM736578_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 2517 |
GSM864340_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 2518 |
GSM923446_6 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 2519 |
GSM767839_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2520 |
GSM973671_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2521 |
GSM935281_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2522 |
GSM935490_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2523 |
GSM973663_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2524 |
GSM831036_1 Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters. Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)). Reads were extended to 200 bp using the -e parameter, otherwise defaults were used. The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp. |
| 2525 |
GSM945190_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2526 |
GSM767838_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2527 |
GSM935527_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2528 |
GSM935509_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2529 |
GSM897085_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2530 |
GSM607494_1 Alignment=Sequence reads were obtained and mapped to the human genome assembly hg18 (March, 2006) or hg19 (February, 2009) using the Illumina Genome Analyzer Pipeline. All reads mapping with two or fewer mismatches were retained and read starts were summed in sliding windows of 400 bp to create summary windows.; Peak Calling=Peaks were called with Sole-Search (http://chipseq.genomecenter.ucdavis.edu/cgi-bin/chipseq.cgi) |
| 2531 |
GSM672833_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaSeq |
| 2532 |
GSM945216_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2533 |
GSM945178_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2534 |
GSM935495_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2535 |
GSM923453_7 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 2536 |
GSM923445_7 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 2537 |
GSM935643_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2538 |
GSM935301_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2539 |
GSM803351_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2540 |
GSM849030_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 2541 |
GSM945249_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2542 |
GSM945200_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2543 |
GSM831017_1 Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters. Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)). Reads were extended to 200 bp using the -e parameter, otherwise defaults were used. The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp. |
| 2544 |
GSM849353_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 2545 |
GSM803452_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2546 |
GSM758561_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2547 |
GSM749719_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 2548 |
GSM817344_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2549 |
GSM977052_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2550 |
GSM935594_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2551 |
GSM736574_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 2552 |
GSM935465_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2553 |
GSM849359_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 2554 |
GSM849366_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 2555 |
GSM840138_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2556 |
GSM935558_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2557 |
GSM605628_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2558 |
GSM605635_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2559 |
GSM935299_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2560 |
GSM749747_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 2561 |
GSM605632_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2562 |
GSM923452_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 2563 |
GSM935562_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2564 |
GSM733640_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 2565 |
GSM923453_5 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 2566 |
GSM733655_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 2567 |
GSM935321_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2568 |
GSM840136_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2569 |
GSM923445_5 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 2570 |
GSM733703_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 2571 |
GSM935448_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2572 |
GSM945273_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2573 |
GSM736498_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 2574 |
GSM849361_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 2575 |
GSM944525_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSunyRipSeq |
| 2576 |
GSM935422_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2577 |
GSM733744_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 2578 |
GSM733710_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 2579 |
GSM803502_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2580 |
GSM923444_13 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 2581 |
GSM736503_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 2582 |
GSM733746_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 2583 |
GSM849343_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 2584 |
GSM935298_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2585 |
GSM973661_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2586 |
GSM935324_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2587 |
GSM935386_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2588 |
GSM935310_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2589 |
GSM803539_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2590 |
GSM736562_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 2591 |
GSM935424_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2592 |
GSM765388_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2593 |
GSM935294_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2594 |
GSM945209_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2595 |
GSM831009_1 Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters. Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)). Reads were extended to 200 bp using the -e parameter, otherwise defaults were used. The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp. |
| 2596 |
GSM736607_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 2597 |
GSM935507_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2598 |
GSM849335_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 2599 |
GSM945230_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2600 |
GSM849338_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 2601 |
GSM923448_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 2602 |
GSM864350_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 2603 |
GSM958731_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq |
| 2604 |
GSM935396_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2605 |
GSM977037_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2606 |
GSM935440_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2607 |
GSM736506_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 2608 |
GSM788076_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhHistone |
| 2609 |
GSM822271_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 2610 |
GSM822288_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 2611 |
GSM822290_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 2612 |
GSM864356_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 2613 |
GSM977041_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2614 |
GSM935516_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2615 |
GSM945210_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2616 |
GSM767845_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2617 |
GSM935484_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2618 |
GSM864352_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 2619 |
GSM803356_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2620 |
GSM945306_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2621 |
GSM605633_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2622 |
GSM935543_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2623 |
GSM830519_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 2624 |
GSM849353_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 2625 |
GSM977030_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2626 |
GSM816643_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 2627 |
GSM849363_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 2628 |
GSM822279_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 2629 |
GSM897084_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2630 |
GSM788087_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhHistone |
| 2631 |
GSM749710_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 2632 |
GSM840138_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2633 |
GSM847566_1 Software=Bowtie, Cufflinks |
| 2634 |
GSM945207_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2635 |
GSM897084_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2636 |
GSM923451_5 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 2637 |
GSM803505_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2638 |
GSM935498_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2639 |
GSM945323_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2640 |
GSM831008_1 Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters. Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)). Reads were extended to 200 bp using the -e parameter, otherwise defaults were used. The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp. |
| 2641 |
GSM923436_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq |
| 2642 |
GSM973682_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2643 |
GSM864337_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 2644 |
GSM736496_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 2645 |
GSM803487_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2646 |
GSM758567_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2647 |
GSM816639_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 2648 |
GSM945295_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2649 |
GSM923445_8 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 2650 |
GSM923453_8 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 2651 |
GSM733645_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 2652 |
GSM736637_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 2653 |
GSM923443_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 2654 |
GSM803534_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2655 |
GSM646561_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 2656 |
GSM736570_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 2657 |
GSM803351_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2658 |
GSM803420_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2659 |
GSM803432_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2660 |
GSM945161_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2661 |
GSM935443_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2662 |
GSM935640_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2663 |
GSM973661_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2664 |
GSM977048_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2665 |
GSM935276_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2666 |
GSM935334_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2667 |
GSM777641_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUchicagoTfbs |
| 2668 |
GSM935491_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2669 |
GSM923448_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 2670 |
GSM864359_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 2671 |
GSM736618_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 2672 |
GSM864360_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 2673 |
GSM935648_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2674 |
GSM765389_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2675 |
GSM945201_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2676 |
GSM923450_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 2677 |
GSM803355_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2678 |
GSM733722_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 2679 |
GSM977039_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2680 |
GSM822300_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 2681 |
GSM973685_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2682 |
GSM897074_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2683 |
GSM803342_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2684 |
GSM733652_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 2685 |
GSM935357_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2686 |
GSM935617_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2687 |
GSM897083_8 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2688 |
GSM935481_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2689 |
GSM977031_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2690 |
GSM736598_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 2691 |
GSM923424_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq |
| 2692 |
GSM935600_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2693 |
GSM945205_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2694 |
GSM935293_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2695 |
GSM923444_10 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 2696 |
GSM973680_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2697 |
GSM945294_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2698 |
GSM849331_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 2699 |
GSM935452_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2700 |
GSM736512_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 2701 |
GSM897076_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2702 |
GSM923446_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 2703 |
GSM830528_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 2704 |
GSM935595_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2705 |
GSM945225_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2706 |
GSM733675_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 2707 |
GSM935362_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2708 |
GSM803495_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2709 |
GSM782124_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2710 |
GSM864352_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 2711 |
GSM765401_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2712 |
GSM765392_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2713 |
GSM816641_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 2714 |
GSM830991_1 Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters. Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)). Reads were extended to 200 bp using the -e parameter, otherwise defaults were used. The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp. |
| 2715 |
GSM803394_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2716 |
GSM935500_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2717 |
GSM935285_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2718 |
GSM935463_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2719 |
GSM816668_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 2720 |
GSM849342_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 2721 |
GSM765401_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2722 |
GSM736587_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 2723 |
GSM945326_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2724 |
GSM849338_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 2725 |
GSM958748_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq |
| 2726 |
GSM765391_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2727 |
GSM973685_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2728 |
GSM803457_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2729 |
GSM803434_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2730 |
GSM944523_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSunyRipSeq |
| 2731 |
GSM935539_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2732 |
GSM758565_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2733 |
GSM830522_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 2734 |
GSM816661_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 2735 |
GSM803398_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2736 |
GSM935282_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2737 |
GSM733709_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 2738 |
GSM822292_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 2739 |
GSM749717_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 2740 |
GSM733730_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 2741 |
GSM822310_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 2742 |
GSM733677_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 2743 |
GSM945325_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2744 |
GSM935441_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2745 |
GSM935382_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2746 |
GSM749740_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 2747 |
GSM923445_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 2748 |
GSM923453_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 2749 |
GSM923447_7 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 2750 |
GSM777644_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUchicagoTfbs |
| 2751 |
GSM945195_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2752 |
GSM945305_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2753 |
GSM935565_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2754 |
GSM803508_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2755 |
GSM923439_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 2756 |
GSM749775_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 2757 |
GSM945242_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2758 |
GSM803438_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2759 |
GSM944526_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSunyRipSeq |
| 2760 |
GSM897073_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2761 |
GSM830530_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 2762 |
GSM736604_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 2763 |
GSM822281_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 2764 |
GSM803365_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2765 |
GSM803431_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2766 |
GSM803456_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2767 |
GSM864349_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 2768 |
GSM765403_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2769 |
GSM803454_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2770 |
GSM945176_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2771 |
GSM973664_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2772 |
GSM777637_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUchicagoTfbs |
| 2773 |
GSM958735_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq |
| 2774 |
GSM935278_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2775 |
GSM831016_1 Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters. Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)). Reads were extended to 200 bp using the -e parameter, otherwise defaults were used. The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp. |
| 2776 |
GSM733642_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 2777 |
GSM733669_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 2778 |
GSM935288_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2779 |
GSM736548_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 2780 |
GSM849300_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 2781 |
GSM849337_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 2782 |
GSM803357_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2783 |
GSM749751_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 2784 |
GSM816664_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 2785 |
GSM822284_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 2786 |
GSM977039_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2787 |
GSM758566_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2788 |
GSM749760_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 2789 |
GSM803523_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2790 |
GSM803422_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2791 |
GSM733713_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 2792 |
GSM864348_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 2793 |
GSM822297_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 2794 |
GSM958740_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq |
| 2795 |
GSM973662_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2796 |
GSM749749_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 2797 |
GSM733693_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 2798 |
GSM733666_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 2799 |
GSM973676_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2800 |
GSM803421_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2801 |
GSM733698_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 2802 |
GSM935581_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2803 |
GSM935290_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2804 |
GSM749709_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 2805 |
GSM945179_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2806 |
GSM733740_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 2807 |
GSM897083_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2808 |
GSM897085_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2809 |
GSM803421_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2810 |
GSM935425_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2811 |
GSM849364_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 2812 |
GSM945293_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2813 |
GSM803368_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2814 |
GSM830997_1 Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters. Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)). Reads were extended to 200 bp using the -e parameter, otherwise defaults were used. The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp. |
| 2815 |
GSM767852_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2816 |
GSM864353_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 2817 |
GSM767844_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2818 |
GSM935439_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2819 |
GSM935375_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2820 |
GSM831026_1 Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters. Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)). Reads were extended to 200 bp using the -e parameter, otherwise defaults were used. The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp. |
| 2821 |
GSM803471_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2822 |
GSM765398_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2823 |
GSM935348_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2824 |
GSM736523_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 2825 |
GSM973683_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2826 |
GSM822288_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 2827 |
GSM830536_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 2828 |
GSM935651_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2829 |
GSM803469_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2830 |
GSM736561_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 2831 |
GSM977037_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2832 |
GSM767857_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2833 |
GSM733684_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 2834 |
GSM733691_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 2835 |
GSM672835_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaSeq |
| 2836 |
GSM923451_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 2837 |
GSM607492_1 Alignment=Sequence reads were obtained and mapped to the human genome assembly hg18 (March, 2006) or hg19 (February, 2009) using the Illumina Genome Analyzer Pipeline. All reads mapping with two or fewer mismatches were retained and read starts were summed in sliding windows of 400 bp to create summary windows.; Peak Calling=Peaks were called with Sole-Search (http://chipseq.genomecenter.ucdavis.edu/cgi-bin/chipseq.cgi) |
| 2838 |
GSM767852_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2839 |
GSM935327_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2840 |
GSM973676_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2841 |
GSM849334_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 2842 |
GSM935549_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2843 |
GSM749724_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 2844 |
GSM935492_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2845 |
GSM749672_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 2846 |
GSM923422_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq |
| 2847 |
GSM945301_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2848 |
GSM849356_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 2849 |
GSM849300_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 2850 |
GSM803374_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2851 |
GSM749705_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 2852 |
GSM945183_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2853 |
GSM803509_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2854 |
GSM935540_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2855 |
GSM973671_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2856 |
GSM830530_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 2857 |
GSM803537_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2858 |
GSM945191_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2859 |
GSM803390_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2860 |
GSM803429_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2861 |
GSM605634_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2862 |
GSM803334_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2863 |
GSM945304_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2864 |
GSM945241_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2865 |
GSM944520_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSunyRipSeq |
| 2866 |
GSM945177_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2867 |
GSM849302_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 2868 |
GSM935354_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2869 |
GSM605626_1 hg18=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg18&g=wgEncodeCshlShortRnaSeq; hg19=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2870 |
GSM973671_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2871 |
GSM935535_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2872 |
GSM977034_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2873 |
GSM923441_6 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 2874 |
GSM803379_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2875 |
GSM733705_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 2876 |
GSM736615_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 2877 |
GSM733678_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 2878 |
GSM849355_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 2879 |
GSM816653_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 2880 |
GSM765390_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2881 |
GSM973676_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2882 |
GSM945202_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2883 |
GSM945312_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2884 |
GSM749676_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 2885 |
GSM977038_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2886 |
GSM803456_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2887 |
GSM935603_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2888 |
GSM935341_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2889 |
GSM736564_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 2890 |
GSM935315_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2891 |
GSM977044_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2892 |
GSM897077_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2893 |
GSM803372_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2894 |
GSM973666_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2895 |
GSM758576_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2896 |
GSM973675_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2897 |
GSM736597_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 2898 |
GSM945190_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2899 |
GSM973668_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2900 |
GSM758560_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2901 |
GSM923420_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq |
| 2902 |
GSM816670_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 2903 |
GSM733683_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 2904 |
GSM733717_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 2905 |
GSM944525_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSunyRipSeq |
| 2906 |
GSM816652_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 2907 |
GSM923428_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq |
| 2908 |
GSM977031_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2909 |
GSM923446_7 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq |
| 2910 |
GSM945234_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2911 |
GSM758561_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2912 |
GSM758578_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2913 |
GSM935412_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2914 |
GSM958729_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq |
| 2915 |
GSM958736_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq |
| 2916 |
GSM733699_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 2917 |
GSM945199_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 2918 |
GSM923431_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq |
| 2919 |
GSM973664_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2920 |
GSM973671_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq |
| 2921 |
GSM767852_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2922 |
GSM935479_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 2923 |
GSM1022646_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 2924 |
GSM1003558_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 2925 |
GSM1011128_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 2926 |
GSM1008564_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 2927 |
GSM1024769_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 2928 |
GSM979655_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 2929 |
GSM979651_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 2930 |
GSM979656_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 2931 |
GSM1024760_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 2932 |
GSM1014516_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 2933 |
GSM1008584_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 2934 |
GSM1010896_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2935 |
GSM1014538_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 2936 |
GSM981252_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2937 |
GSM981254_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2938 |
GSM1010776_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2939 |
GSM984610_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2940 |
GSM1014527_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 2941 |
GSM981253_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2942 |
GSM984619_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2943 |
GSM979642_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 2944 |
GSM1010774_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2945 |
GSM1010740_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2946 |
GSM979655_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 2947 |
GSM1003555_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 2948 |
GSM1010881_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2949 |
GSM1010903_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2950 |
GSM1010744_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2951 |
GSM1024755_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 2952 |
GSM1010828_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2953 |
GSM1003517_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 2954 |
GSM1006911_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 2955 |
GSM981253_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2956 |
GSM1010759_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2957 |
GSM1006911_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 2958 |
GSM981248_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2959 |
GSM979632_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 2960 |
GSM979638_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 2961 |
GSM979660_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 2962 |
GSM1010855_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2963 |
GSM1006874_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 2964 |
GSM1006891_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 2965 |
GSM981250_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2966 |
GSM1010766_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2967 |
GSM1010858_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2968 |
GSM1010861_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2969 |
GSM1003468_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 2970 |
GSM1010816_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2971 |
GSM1003487_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 2972 |
GSM1010787_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2973 |
GSM984616_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2974 |
GSM981259_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2975 |
GSM1014520_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 2976 |
GSM1003506_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 2977 |
GSM981245_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2978 |
GSM1010836_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2979 |
GSM984612_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2980 |
GSM1010726_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2981 |
GSM981248_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 2982 |
GSM1003457_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 2983 |
GSM1022657_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 2984 |
GSM1003570_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 2985 |
GSM1010780_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2986 |
GSM979652_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 2987 |
GSM1014530_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 2988 |
GSM1010837_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2989 |
GSM1003474_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 2990 |
GSM1010904_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2991 |
GSM1008587_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 2992 |
GSM1008578_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 2993 |
GSM1008577_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 2994 |
GSM1010769_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2995 |
GSM979645_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 2996 |
GSM1006870_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 2997 |
GSM1010729_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 2998 |
GSM979660_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 2999 |
GSM1003495_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3000 |
GSM1003559_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3001 |
GSM1010849_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3002 |
GSM1006880_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 3003 |
GSM1003449_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3004 |
GSM1003448_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3005 |
GSM1003562_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3006 |
GSM984608_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3007 |
GSM1003557_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3008 |
GSM979659_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3009 |
GSM1003568_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3010 |
GSM1024774_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 3011 |
GSM1010754_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3012 |
GSM979648_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3013 |
GSM979654_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3014 |
GSM1010754_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3015 |
GSM1003501_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3016 |
GSM981244_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3017 |
GSM1014535_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 3018 |
GSM1010753_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3019 |
GSM1006883_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 3020 |
GSM979659_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3021 |
GSM984607_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3022 |
GSM984617_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3023 |
GSM1010865_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3024 |
GSM1010810_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3025 |
GSM1003563_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3026 |
GSM1006907_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 3027 |
GSM1010739_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3028 |
GSM1024754_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 3029 |
GSM979657_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3030 |
GSM1003561_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3031 |
GSM1010741_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3032 |
GSM1010903_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3033 |
GSM1010821_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3034 |
GSM1003499_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3035 |
GSM1010806_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3036 |
GSM1008572_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3037 |
GSM1010791_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3038 |
GSM1010819_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3039 |
GSM1010762_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3040 |
GSM979652_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3041 |
GSM1006913_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 3042 |
GSM1010731_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3043 |
GSM1010877_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3044 |
GSM1008566_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3045 |
GSM1010749_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3046 |
GSM1008562_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3047 |
GSM1010810_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3048 |
GSM984612_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3049 |
GSM1010870_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3050 |
GSM1003519_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3051 |
GSM1008570_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3052 |
GSM979641_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3053 |
GSM1009528_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 3054 |
GSM1003471_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3055 |
GSM984609_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3056 |
GSM1024785_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 3057 |
GSM1003518_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3058 |
GSM1003534_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3059 |
GSM1010906_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3060 |
GSM1024753_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 3061 |
GSM1008593_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3062 |
GSM1022677_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 3063 |
GSM1014511_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 3064 |
GSM1006868_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 3065 |
GSM1006902_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 3066 |
GSM1003503_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3067 |
GSM1010800_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3068 |
GSM1008580_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3069 |
GSM1010733_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3070 |
GSM1008589_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3071 |
GSM1024773_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 3072 |
GSM1010756_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3073 |
GSM1006875_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 3074 |
GSM979661_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3075 |
GSM1024784_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 3076 |
GSM1003579_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3077 |
GSM1014512_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 3078 |
GSM1008605_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3079 |
GSM1014518_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 3080 |
GSM1003624_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 3081 |
GSM1003456_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3082 |
GSM1008556_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3083 |
GSM1010752_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3084 |
GSM979640_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3085 |
GSM984604_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3086 |
GSM1011130_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 3087 |
GSM1003629_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 3088 |
GSM1006906_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 3089 |
GSM1022645_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 3090 |
GSM1010854_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3091 |
GSM981244_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3092 |
GSM1010799_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3093 |
GSM1008560_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3094 |
GSM1006909_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 3095 |
GSM1010883_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3096 |
GSM984620_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3097 |
GSM1010752_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3098 |
GSM984618_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3099 |
GSM1010814_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3100 |
GSM979632_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3101 |
GSM984617_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3102 |
GSM1010848_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3103 |
GSM1010745_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3104 |
GSM1010767_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3105 |
GSM1006903_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 3106 |
GSM1011120_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 3107 |
GSM1010722_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3108 |
GSM1022640_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 3109 |
GSM1010743_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3110 |
GSM1003536_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3111 |
GSM1003607_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 3112 |
GSM979662_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3113 |
GSM1003445_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3114 |
GSM1010807_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3115 |
GSM981243_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3116 |
GSM1011126_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 3117 |
GSM981255_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3118 |
GSM1008556_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3119 |
GSM979643_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3120 |
GSM1006910_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 3121 |
GSM1024746_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 3122 |
GSM1024749_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 3123 |
GSM1010827_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3124 |
GSM984605_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3125 |
GSM1008599_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3126 |
GSM1003467_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3127 |
GSM1006873_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 3128 |
GSM1010832_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3129 |
GSM1010794_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3130 |
GSM1010772_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3131 |
GSM1010815_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3132 |
GSM1011119_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 3133 |
GSM1022648_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 3134 |
GSM979650_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3135 |
GSM1008601_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3136 |
GSM1008582_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3137 |
GSM1003509_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3138 |
GSM1010884_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3139 |
GSM984606_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3140 |
GSM1010842_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3141 |
GSM981259_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3142 |
GSM1008588_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3143 |
GSM1010912_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 3144 |
GSM1010736_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3145 |
GSM1008569_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3146 |
GSM1010824_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3147 |
GSM1024745_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 3148 |
GSM1010721_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3149 |
GSM1006915_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 3150 |
GSM1008597_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3151 |
GSM1014515_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 3152 |
GSM981247_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3153 |
GSM1010862_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3154 |
GSM1010784_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3155 |
GSM1006893_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 3156 |
GSM1010821_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3157 |
GSM1010835_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3158 |
GSM1011127_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 3159 |
GSM1010735_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3160 |
GSM1024763_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 3161 |
GSM1010846_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3162 |
GSM1006909_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 3163 |
GSM1010782_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3164 |
GSM1006912_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 3165 |
GSM979647_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3166 |
GSM1014534_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 3167 |
GSM1003634_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 3168 |
GSM1010898_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3169 |
GSM1010817_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3170 |
GSM1006891_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 3171 |
GSM1010901_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3172 |
GSM1003532_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3173 |
GSM1010846_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3174 |
GSM1014541_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 3175 |
GSM1010769_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3176 |
GSM1008559_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3177 |
GSM979636_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3178 |
GSM979658_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3179 |
GSM1024757_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 3180 |
GSM1022647_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 3181 |
GSM984618_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3182 |
GSM1006872_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 3183 |
GSM1010875_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3184 |
GSM1024772_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 3185 |
GSM1006885_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 3186 |
GSM1006904_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 3187 |
GSM1003609_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 3188 |
GSM979659_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3189 |
GSM1022635_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 3190 |
GSM1003582_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3191 |
GSM979649_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3192 |
GSM1003565_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3193 |
GSM1008601_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3194 |
GSM1003608_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 3195 |
GSM1006905_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 3196 |
GSM984613_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3197 |
GSM1010804_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3198 |
GSM1024789_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 3199 |
GSM1010802_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3200 |
GSM1010813_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3201 |
GSM1010809_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3202 |
GSM1011124_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 3203 |
GSM981248_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3204 |
GSM1010800_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3205 |
GSM1010757_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3206 |
GSM1008588_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3207 |
GSM1006909_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 3208 |
GSM1010766_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3209 |
GSM1003459_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3210 |
GSM979647_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3211 |
GSM1022630_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 3212 |
GSM979638_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3213 |
GSM1010729_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3214 |
GSM979649_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3215 |
GSM1010899_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3216 |
GSM1010829_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3217 |
GSM984606_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3218 |
GSM1008583_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3219 |
GSM984613_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3220 |
GSM979650_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3221 |
GSM1010777_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3222 |
GSM1010857_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3223 |
GSM1010798_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3224 |
GSM1022655_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 3225 |
GSM979652_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3226 |
GSM979632_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3227 |
GSM1003530_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3228 |
GSM984609_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3229 |
GSM1010760_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3230 |
GSM1008574_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3231 |
GSM1010768_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3232 |
GSM1003531_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3233 |
GSM1006885_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 3234 |
GSM1010801_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3235 |
GSM1010755_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3236 |
GSM1003526_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3237 |
GSM984619_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3238 |
GSM1003520_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3239 |
GSM1008585_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3240 |
GSM1010789_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3241 |
GSM1010852_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3242 |
GSM984616_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3243 |
GSM981249_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3244 |
GSM981251_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3245 |
GSM1022634_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 3246 |
GSM981245_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3247 |
GSM984621_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3248 |
GSM1010778_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3249 |
GSM1010819_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3250 |
GSM1014530_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 3251 |
GSM979652_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3252 |
GSM981260_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3253 |
GSM1010735_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3254 |
GSM979640_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3255 |
GSM1022633_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 3256 |
GSM979656_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3257 |
GSM1006902_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 3258 |
GSM1010737_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3259 |
GSM979634_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3260 |
GSM1010864_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3261 |
GSM1003446_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3262 |
GSM1024768_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 3263 |
GSM1006915_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 3264 |
GSM981255_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3265 |
GSM1010892_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3266 |
GSM1003533_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3267 |
GSM1010845_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3268 |
GSM1003444_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3269 |
GSM1008578_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3270 |
GSM1022644_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 3271 |
GSM1011129_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 3272 |
GSM1006890_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 3273 |
GSM1003631_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 3274 |
GSM979646_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3275 |
GSM1014526_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 3276 |
GSM1010731_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3277 |
GSM1010749_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3278 |
GSM1003617_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 3279 |
GSM1010839_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3280 |
GSM1024766_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 3281 |
GSM979654_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3282 |
GSM1014515_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 3283 |
GSM984615_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3284 |
GSM1014533_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 3285 |
GSM1010734_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3286 |
GSM1010753_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3287 |
GSM1010838_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3288 |
GSM1010863_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3289 |
GSM1010746_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3290 |
GSM979646_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3291 |
GSM1010745_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3292 |
GSM1010763_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3293 |
GSM1008591_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3294 |
GSM1003541_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3295 |
GSM1010854_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3296 |
GSM979648_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3297 |
GSM1010868_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3298 |
GSM1008581_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3299 |
GSM1024795_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 3300 |
GSM979656_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3301 |
GSM1014535_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 3302 |
GSM1006908_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 3303 |
GSM1010799_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3304 |
GSM979663_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3305 |
GSM1008568_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3306 |
GSM1010871_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3307 |
GSM1008557_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3308 |
GSM979643_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3309 |
GSM1024758_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 3310 |
GSM981246_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3311 |
GSM1003458_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3312 |
GSM1010762_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3313 |
GSM1010850_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3314 |
GSM1003630_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 3315 |
GSM1003610_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 3316 |
GSM1024759_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 3317 |
GSM1010786_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3318 |
GSM1003504_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3319 |
GSM1010784_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3320 |
GSM1010866_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3321 |
GSM1010798_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3322 |
GSM1014537_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 3323 |
GSM1010719_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3324 |
GSM1003491_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3325 |
GSM1014521_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 3326 |
GSM1008605_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3327 |
GSM1024756_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 3328 |
GSM1008600_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3329 |
GSM984621_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3330 |
GSM1022629_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 3331 |
GSM1014526_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 3332 |
GSM1022656_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 3333 |
GSM1010758_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3334 |
GSM1008579_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3335 |
GSM1014528_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 3336 |
GSM1008586_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3337 |
GSM1008571_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3338 |
GSM1008590_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3339 |
GSM1010887_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3340 |
GSM1010891_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3341 |
GSM979632_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3342 |
GSM1010725_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3343 |
GSM1006908_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 3344 |
GSM1003482_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3345 |
GSM981244_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3346 |
GSM1003576_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3347 |
GSM1003511_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3348 |
GSM1010760_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3349 |
GSM1003560_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3350 |
GSM979663_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3351 |
GSM984613_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3352 |
GSM1010771_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3353 |
GSM1006878_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 3354 |
GSM1010873_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3355 |
GSM1003622_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 3356 |
GSM1010720_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3357 |
GSM1010813_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3358 |
GSM979633_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3359 |
GSM1014510_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 3360 |
GSM984615_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3361 |
GSM1003450_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3362 |
GSM1003469_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3363 |
GSM979661_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3364 |
GSM1010880_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3365 |
GSM1010824_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3366 |
GSM1008594_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3367 |
GSM1008574_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3368 |
GSM981256_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3369 |
GSM1010750_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3370 |
GSM1010900_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3371 |
GSM1008573_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3372 |
GSM1003543_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3373 |
GSM1010902_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3374 |
GSM1006877_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 3375 |
GSM1003615_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 3376 |
GSM1010914_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 3377 |
GSM984614_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3378 |
GSM1010851_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3379 |
GSM981252_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3380 |
GSM1024792_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 3381 |
GSM1010888_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3382 |
GSM1006893_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 3383 |
GSM1024767_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 3384 |
GSM979646_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3385 |
GSM1022669_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 3386 |
GSM1010811_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3387 |
GSM1010825_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3388 |
GSM1022662_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 3389 |
GSM1014517_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 3390 |
GSM981256_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3391 |
GSM1010759_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3392 |
GSM1006907_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 3393 |
GSM1010788_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3394 |
GSM1006902_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 3395 |
GSM1010764_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3396 |
GSM1010773_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3397 |
GSM1014537_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 3398 |
GSM1011123_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 3399 |
GSM1006884_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 3400 |
GSM1014509_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 3401 |
GSM1014531_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 3402 |
GSM1010875_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3403 |
GSM1011121_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 3404 |
GSM1006867_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 3405 |
GSM984607_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3406 |
GSM1010765_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3407 |
GSM1006902_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 3408 |
GSM1003505_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3409 |
GSM1024747_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 3410 |
GSM979648_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3411 |
GSM1003453_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3412 |
GSM1010833_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3413 |
GSM1022639_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 3414 |
GSM1003529_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3415 |
GSM1003578_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3416 |
GSM1006870_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 3417 |
GSM1003516_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3418 |
GSM979651_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3419 |
GSM1010786_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3420 |
GSM1008584_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3421 |
GSM1003479_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3422 |
GSM984607_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3423 |
GSM1024743_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 3424 |
GSM1006905_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 3425 |
GSM1003548_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3426 |
GSM1014536_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 3427 |
GSM979639_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3428 |
GSM1024742_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 3429 |
GSM1003580_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3430 |
GSM1006908_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 3431 |
GSM1010904_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3432 |
GSM984620_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3433 |
GSM1010893_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3434 |
GSM979657_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3435 |
GSM1010901_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3436 |
GSM1010895_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3437 |
GSM1010894_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3438 |
GSM1003554_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3439 |
GSM1010860_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3440 |
GSM1003550_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3441 |
GSM1006878_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 3442 |
GSM1014519_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 3443 |
GSM1014541_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 3444 |
GSM1022631_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 3445 |
GSM1010732_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3446 |
GSM1008595_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3447 |
GSM1010878_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3448 |
GSM1010848_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3449 |
GSM981249_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3450 |
GSM1003556_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3451 |
GSM1014525_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 3452 |
GSM1010867_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3453 |
GSM1010823_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3454 |
GSM984619_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3455 |
GSM1008575_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3456 |
GSM1008560_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3457 |
GSM984606_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3458 |
GSM1010862_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3459 |
GSM1003451_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3460 |
GSM1010779_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3461 |
GSM984604_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3462 |
GSM1003513_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3463 |
GSM1006913_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 3464 |
GSM1022676_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 3465 |
GSM1010890_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3466 |
GSM981251_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3467 |
GSM1010806_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3468 |
GSM979644_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3469 |
GSM1003512_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3470 |
GSM1006892_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 3471 |
GSM1014539_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 3472 |
GSM1003627_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 3473 |
GSM1003611_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 3474 |
GSM1014513_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 3475 |
GSM1010774_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3476 |
GSM1006883_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 3477 |
GSM1011126_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 3478 |
GSM1014520_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 3479 |
GSM1014518_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 3480 |
GSM1010772_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3481 |
GSM979642_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3482 |
GSM1014521_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 3483 |
GSM981246_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3484 |
GSM981250_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3485 |
GSM979650_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3486 |
GSM1010849_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3487 |
GSM1006866_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 3488 |
GSM1006912_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 3489 |
GSM1024781_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 3490 |
GSM981251_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3491 |
GSM984611_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3492 |
GSM1003584_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3493 |
GSM1024777_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 3494 |
GSM979660_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3495 |
GSM979638_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3496 |
GSM1014508_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 3497 |
GSM1006914_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 3498 |
GSM1003626_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 3499 |
GSM1010897_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3500 |
GSM1022666_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 3501 |
GSM979657_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3502 |
GSM1010795_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3503 |
GSM1003485_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3504 |
GSM979662_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3505 |
GSM1003613_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 3506 |
GSM979637_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3507 |
GSM1011123_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 3508 |
GSM984607_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3509 |
GSM1010751_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3510 |
GSM1008580_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3511 |
GSM1006904_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 3512 |
GSM979640_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3513 |
GSM979645_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3514 |
GSM1010750_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3515 |
GSM1024751_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 3516 |
GSM984619_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3517 |
GSM1010803_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3518 |
GSM984618_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3519 |
GSM1022638_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 3520 |
GSM1008596_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3521 |
GSM981260_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3522 |
GSM1003552_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3523 |
GSM1010826_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3524 |
GSM1010866_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3525 |
GSM981253_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3526 |
GSM979663_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3527 |
GSM981247_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3528 |
GSM979633_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3529 |
GSM1010835_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3530 |
GSM1014540_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 3531 |
GSM1010822_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3532 |
GSM979640_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3533 |
GSM1014522_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 3534 |
GSM1006905_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 3535 |
GSM979657_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3536 |
GSM1022664_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 3537 |
GSM1008561_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3538 |
GSM979658_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3539 |
GSM979631_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3540 |
GSM1008577_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3541 |
GSM1010756_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3542 |
GSM1010879_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3543 |
GSM1014523_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 3544 |
GSM1006910_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 3545 |
GSM979641_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3546 |
GSM979644_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3547 |
GSM1010764_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3548 |
GSM1003473_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3549 |
GSM1003528_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3550 |
GSM1010883_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3551 |
GSM1010869_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3552 |
GSM1022625_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 3553 |
GSM984605_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3554 |
GSM981260_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3555 |
GSM1008561_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3556 |
GSM1010793_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3557 |
GSM1010895_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3558 |
GSM1010802_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3559 |
GSM1008602_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3560 |
GSM981256_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3561 |
GSM1010893_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3562 |
GSM1010844_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3563 |
GSM1006882_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 3564 |
GSM1010725_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3565 |
GSM1006873_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 3566 |
GSM984612_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3567 |
GSM1010847_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3568 |
GSM1010882_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3569 |
GSM1003551_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3570 |
GSM1003628_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 3571 |
GSM1010822_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3572 |
GSM1011129_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 3573 |
GSM1008604_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3574 |
GSM979656_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3575 |
GSM984614_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3576 |
GSM1010742_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3577 |
GSM981245_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3578 |
GSM1010793_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3579 |
GSM1003540_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3580 |
GSM1010857_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3581 |
GSM1010843_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3582 |
GSM1006904_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 3583 |
GSM1003621_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 3584 |
GSM1014536_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 3585 |
GSM1003537_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3586 |
GSM1010790_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3587 |
GSM1006910_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 3588 |
GSM984610_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3589 |
GSM1014524_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 3590 |
GSM1024775_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 3591 |
GSM1008576_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3592 |
GSM1010890_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3593 |
GSM1014528_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 3594 |
GSM981252_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3595 |
GSM979659_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3596 |
GSM1006907_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 3597 |
GSM1010809_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3598 |
GSM1010831_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3599 |
GSM1010778_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3600 |
GSM1010783_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3601 |
GSM1010820_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3602 |
GSM1014534_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 3603 |
GSM1010872_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3604 |
GSM1024786_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 3605 |
GSM979663_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3606 |
GSM1010876_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3607 |
GSM981255_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3608 |
GSM1006895_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 3609 |
GSM1010859_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3610 |
GSM1010737_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3611 |
GSM984616_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3612 |
GSM979654_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3613 |
GSM1011130_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 3614 |
GSM984615_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3615 |
GSM1008558_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3616 |
GSM1006882_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 3617 |
GSM1014510_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 3618 |
GSM979653_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3619 |
GSM1008606_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3620 |
GSM1010783_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3621 |
GSM1014512_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 3622 |
GSM1022667_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 3623 |
GSM1024788_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 3624 |
GSM1011125_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 3625 |
GSM1003455_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3626 |
GSM1014519_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 3627 |
GSM1006876_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 3628 |
GSM1010834_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3629 |
GSM984610_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3630 |
GSM1003486_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3631 |
GSM1010834_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3632 |
GSM1022670_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 3633 |
GSM1003573_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3634 |
GSM1010878_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3635 |
GSM1010902_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3636 |
GSM1024750_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 3637 |
GSM1010888_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3638 |
GSM1010741_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3639 |
GSM984604_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3640 |
GSM981254_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3641 |
GSM981255_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3642 |
GSM1010872_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3643 |
GSM984618_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3644 |
GSM1010776_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3645 |
GSM1024791_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 3646 |
GSM1003489_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3647 |
GSM1010856_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3648 |
GSM979635_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3649 |
GSM1014524_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 3650 |
GSM1006881_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 3651 |
GSM1010892_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3652 |
GSM1014531_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 3653 |
GSM1010871_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3654 |
GSM984612_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3655 |
GSM984617_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3656 |
GSM979658_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3657 |
GSM1022636_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 3658 |
GSM1010820_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3659 |
GSM1003462_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3660 |
GSM981247_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3661 |
GSM1024765_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 3662 |
GSM1003527_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3663 |
GSM1003581_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3664 |
GSM979637_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3665 |
GSM1011124_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 3666 |
GSM1006912_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 3667 |
GSM981253_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3668 |
GSM1010733_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3669 |
GSM1014532_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 3670 |
GSM1006886_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 3671 |
GSM1014529_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 3672 |
GSM1006911_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 3673 |
GSM1003538_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3674 |
GSM1010889_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3675 |
GSM984608_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3676 |
GSM1006911_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 3677 |
GSM979653_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3678 |
GSM1003544_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3679 |
GSM1011127_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 3680 |
GSM1006894_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 3681 |
GSM1003602_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 3682 |
GSM1010832_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3683 |
GSM979637_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3684 |
GSM1010771_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3685 |
GSM1008570_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3686 |
GSM979646_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3687 |
GSM1008571_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3688 |
GSM1011121_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 3689 |
GSM981247_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3690 |
GSM1003523_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3691 |
GSM1006886_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 3692 |
GSM1010881_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3693 |
GSM981256_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3694 |
GSM1022673_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 3695 |
GSM1010840_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3696 |
GSM1022652_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 3697 |
GSM1010785_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3698 |
GSM981259_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3699 |
GSM1003510_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3700 |
GSM1024778_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 3701 |
GSM979643_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3702 |
GSM1003447_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3703 |
GSM1010838_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3704 |
GSM1014516_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 3705 |
GSM1010785_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3706 |
GSM979636_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3707 |
GSM1008600_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3708 |
GSM981258_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3709 |
GSM1010728_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3710 |
GSM1008603_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3711 |
GSM981250_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3712 |
GSM1010816_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3713 |
GSM1010865_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3714 |
GSM1022661_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 3715 |
GSM979633_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3716 |
GSM1006875_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 3717 |
GSM979634_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3718 |
GSM1006907_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 3719 |
GSM1010836_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3720 |
GSM1008599_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3721 |
GSM1010761_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3722 |
GSM1010874_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3723 |
GSM1003464_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3724 |
GSM1003586_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3725 |
GSM1008576_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3726 |
GSM1011125_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 3727 |
GSM1010775_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3728 |
GSM1008564_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3729 |
GSM1003508_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3730 |
GSM979651_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3731 |
GSM1003472_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3732 |
GSM979645_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3733 |
GSM1003577_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3734 |
GSM1010898_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3735 |
GSM1003454_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3736 |
GSM1006903_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 3737 |
GSM1010876_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3738 |
GSM1010831_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3739 |
GSM1008557_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3740 |
GSM984611_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3741 |
GSM1010738_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3742 |
GSM1010842_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3743 |
GSM979634_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3744 |
GSM1008585_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3745 |
GSM1024744_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 3746 |
GSM1003545_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3747 |
GSM1024771_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 3748 |
GSM1014529_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 3749 |
GSM984614_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3750 |
GSM1014539_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 3751 |
GSM1008568_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3752 |
GSM1022668_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 3753 |
GSM1003463_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3754 |
GSM1010883_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3755 |
GSM1010721_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3756 |
GSM1003585_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3757 |
GSM984620_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3758 |
GSM1022650_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 3759 |
GSM979650_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3760 |
GSM1010751_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3761 |
GSM1003521_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3762 |
GSM1010853_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3763 |
GSM1008590_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3764 |
GSM1010840_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3765 |
GSM1003542_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3766 |
GSM981243_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3767 |
GSM1022651_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 3768 |
GSM1010869_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3769 |
GSM1014511_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 3770 |
GSM1006869_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 3771 |
GSM1003522_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3772 |
GSM979655_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3773 |
GSM1010900_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3774 |
GSM1003481_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3775 |
GSM1003604_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 3776 |
GSM1010845_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3777 |
GSM1003547_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3778 |
GSM1022627_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 3779 |
GSM1010866_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3780 |
GSM1010790_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3781 |
GSM1010847_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3782 |
GSM1010894_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3783 |
GSM1010792_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3784 |
GSM1010738_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3785 |
GSM979643_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3786 |
GSM1010906_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3787 |
GSM1010815_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3788 |
GSM1022665_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 3789 |
GSM1010860_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3790 |
GSM1003619_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 3791 |
GSM984605_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3792 |
GSM984606_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3793 |
GSM1022632_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 3794 |
GSM1010885_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3795 |
GSM1008592_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3796 |
GSM1006914_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 3797 |
GSM1010747_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3798 |
GSM984604_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3799 |
GSM1008558_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3800 |
GSM1003497_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3801 |
GSM1008563_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3802 |
GSM1006887_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 3803 |
GSM1003461_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3804 |
GSM1024790_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 3805 |
GSM1014522_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 3806 |
GSM1010796_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3807 |
GSM1003498_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3808 |
GSM1010740_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3809 |
GSM1008595_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3810 |
GSM1010812_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3811 |
GSM1003567_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3812 |
GSM1014514_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 3813 |
GSM1010796_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3814 |
GSM1011122_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 3815 |
GSM984605_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3816 |
GSM1010905_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3817 |
GSM1010867_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3818 |
GSM1003553_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3819 |
GSM1010757_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3820 |
GSM981260_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3821 |
GSM1008566_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3822 |
GSM1010823_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3823 |
GSM1011128_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 3824 |
GSM979638_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3825 |
GSM1003549_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3826 |
GSM1010770_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3827 |
GSM1024739_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 3828 |
GSM981245_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3829 |
GSM984614_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3830 |
GSM1003478_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3831 |
GSM979649_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3832 |
GSM1010873_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3833 |
GSM1024770_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 3834 |
GSM1010851_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3835 |
GSM1008587_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3836 |
GSM1008603_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3837 |
GSM979662_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3838 |
GSM984609_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3839 |
GSM1008594_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3840 |
GSM1006910_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 3841 |
GSM1010817_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3842 |
GSM979639_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3843 |
GSM1010727_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3844 |
GSM1006904_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 3845 |
GSM979636_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3846 |
GSM1010803_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3847 |
GSM1010739_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3848 |
GSM1010730_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3849 |
GSM1011120_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 3850 |
GSM1022642_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 3851 |
GSM981244_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3852 |
GSM1022643_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 3853 |
GSM1003616_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 3854 |
GSM1006903_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 3855 |
GSM1014517_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 3856 |
GSM1024764_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 3857 |
GSM1008569_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3858 |
GSM1010748_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3859 |
GSM1010723_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3860 |
GSM1010768_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3861 |
GSM1010808_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3862 |
GSM1010867_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3863 |
GSM1003625_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 3864 |
GSM1022674_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 3865 |
GSM984609_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3866 |
GSM1010891_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3867 |
GSM979661_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3868 |
GSM1010858_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3869 |
GSM981246_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3870 |
GSM1010781_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3871 |
GSM1006906_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 3872 |
GSM1010808_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3873 |
GSM1022675_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 3874 |
GSM979645_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3875 |
GSM1006869_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 3876 |
GSM1003452_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3877 |
GSM981258_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3878 |
GSM1024794_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 3879 |
GSM979653_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3880 |
GSM1010805_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3881 |
GSM1008596_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3882 |
GSM1010914_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 3883 |
GSM1003603_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 3884 |
GSM1014509_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 3885 |
GSM979651_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3886 |
GSM979647_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3887 |
GSM1010818_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3888 |
GSM1010728_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3889 |
GSM981258_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3890 |
GSM979637_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3891 |
GSM1014508_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 3892 |
GSM1006906_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 3893 |
GSM1024780_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 3894 |
GSM1024783_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 3895 |
GSM1010718_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3896 |
GSM1010854_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3897 |
GSM1010767_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3898 |
GSM1010894_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3899 |
GSM979661_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3900 |
GSM1008581_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3901 |
GSM1010804_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3902 |
GSM1010805_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3903 |
GSM1010850_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3904 |
GSM1024748_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 3905 |
GSM1010870_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3906 |
GSM1006865_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 3907 |
GSM984615_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3908 |
GSM1003571_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3909 |
GSM1010763_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3910 |
GSM1003633_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 3911 |
GSM1010811_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3912 |
GSM981249_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3913 |
GSM1010880_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3914 |
GSM1010863_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3915 |
GSM981252_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3916 |
GSM1003524_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3917 |
GSM1008583_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3918 |
GSM1003632_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 3919 |
GSM1003480_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3920 |
GSM1010844_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3921 |
GSM1011119_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 3922 |
GSM1014538_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 3923 |
GSM1008592_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3924 |
GSM1003574_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3925 |
GSM1010777_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3926 |
GSM984617_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3927 |
GSM1006866_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 3928 |
GSM1010899_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3929 |
GSM1003494_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3930 |
GSM1003470_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3931 |
GSM1024740_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 3932 |
GSM1010801_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3933 |
GSM1014523_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 3934 |
GSM1024782_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 3935 |
GSM1010839_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3936 |
GSM1010724_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3937 |
GSM1010788_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3938 |
GSM1003460_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3939 |
GSM1006888_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 3940 |
GSM1022654_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 3941 |
GSM1006913_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 3942 |
GSM1008579_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3943 |
GSM1003496_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3944 |
GSM979642_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3945 |
GSM1010852_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3946 |
GSM979634_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3947 |
GSM1008586_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3948 |
GSM1010807_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3949 |
GSM1010743_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3950 |
GSM1010724_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3951 |
GSM984608_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3952 |
GSM1008598_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3953 |
GSM1010896_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3954 |
GSM1010814_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3955 |
GSM1008567_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3956 |
GSM981254_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3957 |
GSM979660_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3958 |
GSM1003502_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3959 |
GSM1006909_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 3960 |
GSM1003514_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3961 |
GSM1003606_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 3962 |
GSM984613_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3963 |
GSM1003465_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3964 |
GSM1010841_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3965 |
GSM1006906_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 3966 |
GSM1010719_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3967 |
GSM981243_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3968 |
GSM1024741_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 3969 |
GSM1003515_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3970 |
GSM984611_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3971 |
GSM1024779_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 3972 |
GSM981257_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3973 |
GSM1010775_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3974 |
GSM1006865_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 3975 |
GSM984610_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3976 |
GSM1003623_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 3977 |
GSM1024776_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 3978 |
GSM1022671_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 3979 |
GSM1003569_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3980 |
GSM979648_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3981 |
GSM1003614_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 3982 |
GSM1003566_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3983 |
GSM1003535_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3984 |
GSM979658_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3985 |
GSM1022660_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 3986 |
GSM1014525_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 3987 |
GSM1008598_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 3988 |
GSM1022672_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 3989 |
GSM1010747_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3990 |
GSM1010791_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3991 |
GSM1003546_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 3992 |
GSM979639_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3993 |
GSM1010789_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3994 |
GSM1006881_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 3995 |
GSM981250_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 3996 |
GSM1010887_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3997 |
GSM979639_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 3998 |
GSM1010727_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 3999 |
GSM1008565_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 4000 |
GSM981243_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 4001 |
GSM1010723_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 4002 |
GSM1010748_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 4003 |
GSM1008562_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 4004 |
GSM1010897_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 4005 |
GSM1022658_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 4006 |
GSM1010758_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 4007 |
GSM1010732_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 4008 |
GSM1006879_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 4009 |
GSM1006871_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 4010 |
GSM1008567_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 4011 |
GSM1003605_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 4012 |
GSM1010861_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 4013 |
GSM1008606_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 4014 |
GSM1003476_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 4015 |
GSM979631_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 4016 |
GSM1009528_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 4017 |
GSM1006913_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 4018 |
GSM1010746_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 4019 |
GSM1010780_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 4020 |
GSM1006908_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 4021 |
GSM1010885_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 4022 |
GSM1010755_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 4023 |
GSM1003539_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 4024 |
GSM1003488_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 4025 |
GSM1022637_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 4026 |
GSM1003612_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 4027 |
GSM1003483_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 4028 |
GSM1010859_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 4029 |
GSM1003583_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 4030 |
GSM1008593_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 4031 |
GSM981251_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 4032 |
GSM979647_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 4033 |
GSM1010829_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 4034 |
GSM1003618_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 4035 |
GSM1010782_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 4036 |
GSM1014532_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 4037 |
GSM1010877_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 4038 |
GSM1010792_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 4039 |
GSM1003492_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 4040 |
GSM1022641_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 4041 |
GSM1008591_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 4042 |
GSM1006887_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 4043 |
GSM1010905_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 4044 |
GSM1003490_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 4045 |
GSM1014513_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 4046 |
GSM979649_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 4047 |
GSM1010718_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 4048 |
GSM1010744_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 4049 |
GSM1003484_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 4050 |
GSM1008565_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 4051 |
GSM1010830_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 4052 |
GSM1022628_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 4053 |
GSM1010742_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 4054 |
GSM1003493_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 4055 |
GSM1014533_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 4056 |
GSM1010773_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 4057 |
GSM1022626_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 4058 |
GSM981258_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 4059 |
GSM1008582_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 4060 |
GSM1010797_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 4061 |
GSM984616_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 4062 |
GSM1010798_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 4063 |
GSM1022659_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 4064 |
GSM1010886_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 4065 |
GSM1003620_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs |
| 4066 |
GSM1010894_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 4067 |
GSM1010828_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 4068 |
GSM1010855_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 4069 |
GSM1008573_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 4070 |
GSM1010833_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 4071 |
GSM981249_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 4072 |
GSM1014514_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 4073 |
GSM981246_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 4074 |
GSM1024787_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 4075 |
GSM1010830_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 4076 |
GSM981259_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 4077 |
GSM1008602_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 4078 |
GSM984620_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 4079 |
GSM1003466_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 4080 |
GSM1010841_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 4081 |
GSM1003572_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 4082 |
GSM979662_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 4083 |
GSM1010854_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 4084 |
GSM1006874_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 4085 |
GSM1011122_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire |
| 4086 |
GSM1010770_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 4087 |
GSM1010879_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 4088 |
GSM984611_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 4089 |
GSM981254_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 4090 |
GSM1010837_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 4091 |
GSM1006889_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 4092 |
GSM1010779_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 4093 |
GSM1006903_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 4094 |
GSM981257_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 4095 |
GSM1010781_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 4096 |
GSM1010761_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 4097 |
GSM1010825_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 4098 |
GSM1010864_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 4099 |
GSM1010765_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 4100 |
GSM1022663_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 4101 |
GSM979633_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 4102 |
GSM979653_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 4103 |
GSM1010874_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 4104 |
GSM1024762_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 4105 |
GSM1008604_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 4106 |
GSM984608_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 4107 |
GSM1010722_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 4108 |
GSM1010827_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 4109 |
GSM1010787_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 4110 |
GSM1022653_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 4111 |
GSM1010883_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 4112 |
GSM1006905_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 4113 |
GSM1003575_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 4114 |
GSM1003477_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 4115 |
GSM1006912_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet |
| 4116 |
GSM1008559_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 4117 |
GSM1008575_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 4118 |
GSM1010826_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 4119 |
GSM1010794_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 4120 |
GSM979635_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 4121 |
GSM979655_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 4122 |
GSM1010843_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 4123 |
GSM1003500_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 4124 |
GSM1003564_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 4125 |
GSM1010856_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 4126 |
GSM979636_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 4127 |
GSM981248_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq |
| 4128 |
GSM1010814_3 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 4129 |
GSM1008589_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 4130 |
GSM1022649_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs |
| 4131 |
GSM1003525_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 4132 |
GSM979654_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 4133 |
GSM1010913_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone |
| 4134 |
GSM1010868_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 4135 |
GSM1008572_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 4136 |
GSM1010886_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 4137 |
GSM1006876_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 4138 |
GSM1010734_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 4139 |
GSM979642_4 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage |
| 4140 |
GSM1010882_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 4141 |
GSM1014540_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 4142 |
GSM1024752_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 4143 |
GSM1010812_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 4144 |
GSM1024761_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |
| 4145 |
GSM1008563_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 4146 |
GSM1008597_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase |
| 4147 |
GSM1003507_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 4148 |
GSM1006877_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip |
| 4149 |
GSM1003475_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone |
| 4150 |
GSM1014527_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf |
| 4151 |
GSM1010889_2 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs |
| 4152 |
GSM1024793_1 Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase |