Statistics
| Branch: | Revision:

root / hg19 / track2ProcessInfo_encode @ 52e54a06

History | View | Annotate | Download (451 kB)

1 8c368a17 Daofeng Li 
GSM605628_6	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2 8c368a17 Daofeng Li 
GSM767846_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3 8c368a17 Daofeng Li 
GSM897082_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
4 8c368a17 Daofeng Li 
GSM973682_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
5 8c368a17 Daofeng Li 
GSM803478_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
6 8c368a17 Daofeng Li 
GSM733734_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
7 8c368a17 Daofeng Li 
GSM646560_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
8 8c368a17 Daofeng Li 
GSM849342_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
9 8c368a17 Daofeng Li 
GSM803442_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
10 8c368a17 Daofeng Li 
GSM973667_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
11 8c368a17 Daofeng Li 
GSM935555_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
12 8c368a17 Daofeng Li 
GSM935381_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
13 8c368a17 Daofeng Li 
GSM605630_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
14 8c368a17 Daofeng Li 
GSM736504_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
15 8c368a17 Daofeng Li 
GSM822268_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
16 8c368a17 Daofeng Li 
GSM733696_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
17 8c368a17 Daofeng Li 
GSM935528_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
18 8c368a17 Daofeng Li 
GSM973665_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
19 8c368a17 Daofeng Li 
GSM822303_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
20 8c368a17 Daofeng Li 
GSM830987_1	Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters.  Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)).  Reads were extended to 200 bp using the -e parameter, otherwise defaults were used.  The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp.
21 8c368a17 Daofeng Li 
GSM897084_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
22 8c368a17 Daofeng Li 
GSM864339_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
23 8c368a17 Daofeng Li 
GSM935397_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
24 8c368a17 Daofeng Li 
GSM935585_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
25 8c368a17 Daofeng Li 
GSM977046_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
26 8c368a17 Daofeng Li 
GSM765387_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
27 8c368a17 Daofeng Li 
GSM945230_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
28 8c368a17 Daofeng Li 
GSM945185_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
29 8c368a17 Daofeng Li 
GSM935329_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
30 8c368a17 Daofeng Li 
GSM897069_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
31 8c368a17 Daofeng Li 
GSM935296_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
32 8c368a17 Daofeng Li 
GSM849343_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
33 8c368a17 Daofeng Li 
GSM830526_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
34 8c368a17 Daofeng Li 
GSM973675_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
35 8c368a17 Daofeng Li 
GSM822305_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
36 8c368a17 Daofeng Li 
GSM803370_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
37 8c368a17 Daofeng Li 
GSM736509_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
38 8c368a17 Daofeng Li 
GSM923443_7	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
39 8c368a17 Daofeng Li 
GSM849027_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
40 8c368a17 Daofeng Li 
GSM977049_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
41 8c368a17 Daofeng Li 
GSM605627_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
42 8c368a17 Daofeng Li 
GSM923439_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
43 8c368a17 Daofeng Li 
GSM758572_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
44 8c368a17 Daofeng Li 
GSM803427_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
45 8c368a17 Daofeng Li 
GSM816649_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
46 8c368a17 Daofeng Li 
GSM945289_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
47 8c368a17 Daofeng Li 
GSM935384_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
48 8c368a17 Daofeng Li 
GSM765399_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
49 8c368a17 Daofeng Li 
GSM973672_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
50 8c368a17 Daofeng Li 
GSM935436_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
51 8c368a17 Daofeng Li 
GSM803476_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
52 8c368a17 Daofeng Li 
GSM758568_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
53 8c368a17 Daofeng Li 
GSM923419_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq
54 8c368a17 Daofeng Li 
GSM758559_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
55 8c368a17 Daofeng Li 
GSM935554_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
56 8c368a17 Daofeng Li 
GSM816659_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
57 8c368a17 Daofeng Li 
GSM767857_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
58 8c368a17 Daofeng Li 
GSM765386_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
59 8c368a17 Daofeng Li 
GSM733749_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
60 8c368a17 Daofeng Li 
GSM803410_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
61 8c368a17 Daofeng Li 
GSM803415_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
62 8c368a17 Daofeng Li 
GSM935429_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
63 8c368a17 Daofeng Li 
GSM945290_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
64 8c368a17 Daofeng Li 
GSM822281_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
65 8c368a17 Daofeng Li 
GSM767841_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
66 8c368a17 Daofeng Li 
GSM945212_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
67 8c368a17 Daofeng Li 
GSM897077_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
68 8c368a17 Daofeng Li 
GSM767856_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
69 8c368a17 Daofeng Li 
GSM973670_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
70 8c368a17 Daofeng Li 
GSM935360_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
71 8c368a17 Daofeng Li 
GSM935533_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
72 8c368a17 Daofeng Li 
GSM958738_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq
73 8c368a17 Daofeng Li 
GSM816633_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
74 8c368a17 Daofeng Li 
GSM923445_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
75 8c368a17 Daofeng Li 
GSM782122_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
76 8c368a17 Daofeng Li 
GSM923453_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
77 8c368a17 Daofeng Li 
GSM803532_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
78 8c368a17 Daofeng Li 
GSM945184_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
79 8c368a17 Daofeng Li 
GSM973677_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
80 8c368a17 Daofeng Li 
GSM803522_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
81 8c368a17 Daofeng Li 
GSM803393_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
82 8c368a17 Daofeng Li 
GSM935552_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
83 8c368a17 Daofeng Li 
GSM767857_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
84 8c368a17 Daofeng Li 
GSM605635_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
85 8c368a17 Daofeng Li 
GSM849331_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
86 8c368a17 Daofeng Li 
GSM945210_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
87 8c368a17 Daofeng Li 
GSM822302_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
88 8c368a17 Daofeng Li 
GSM733657_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
89 8c368a17 Daofeng Li 
GSM765390_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
90 8c368a17 Daofeng Li 
GSM973686_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
91 8c368a17 Daofeng Li 
GSM945170_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
92 8c368a17 Daofeng Li 
GSM931362_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
93 8c368a17 Daofeng Li 
GSM749759_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
94 8c368a17 Daofeng Li 
GSM822296_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
95 8c368a17 Daofeng Li 
GSM736515_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
96 8c368a17 Daofeng Li 
GSM945167_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
97 8c368a17 Daofeng Li 
GSM803402_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
98 8c368a17 Daofeng Li 
GSM945251_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
99 8c368a17 Daofeng Li 
GSM849326_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
100 8c368a17 Daofeng Li 
GSM945856_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhHistone
101 8c368a17 Daofeng Li 
GSM935303_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
102 8c368a17 Daofeng Li 
GSM749686_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
103 8c368a17 Daofeng Li 
GSM733689_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
104 8c368a17 Daofeng Li 
GSM733661_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
105 8c368a17 Daofeng Li 
GSM935387_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
106 8c368a17 Daofeng Li 
GSM923437_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq
107 8c368a17 Daofeng Li 
GSM973672_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
108 8c368a17 Daofeng Li 
GSM765387_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
109 8c368a17 Daofeng Li 
GSM822269_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
110 8c368a17 Daofeng Li 
GSM803448_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
111 8c368a17 Daofeng Li 
GSM736520_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
112 8c368a17 Daofeng Li 
GSM973666_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
113 8c368a17 Daofeng Li 
GSM935614_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
114 8c368a17 Daofeng Li 
GSM803355_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
115 8c368a17 Daofeng Li 
GSM945292_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
116 8c368a17 Daofeng Li 
GSM935624_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
117 8c368a17 Daofeng Li 
GSM923446_8	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
118 8c368a17 Daofeng Li 
GSM830988_1	Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters.  Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)).  Reads were extended to 200 bp using the -e parameter, otherwise defaults were used.  The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp.
119 8c368a17 Daofeng Li 
GSM849367_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
120 8c368a17 Daofeng Li 
GSM803426_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
121 8c368a17 Daofeng Li 
GSM816652_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
122 8c368a17 Daofeng Li 
GSM897077_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
123 8c368a17 Daofeng Li 
GSM923440_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
124 8c368a17 Daofeng Li 
GSM840137_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
125 8c368a17 Daofeng Li 
GSM935317_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
126 8c368a17 Daofeng Li 
GSM945233_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
127 8c368a17 Daofeng Li 
GSM849339_5	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
128 8c368a17 Daofeng Li 
GSM803437_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
129 8c368a17 Daofeng Li 
GSM765404_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
130 8c368a17 Daofeng Li 
GSM822299_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
131 8c368a17 Daofeng Li 
GSM923420_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq
132 8c368a17 Daofeng Li 
GSM803466_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
133 8c368a17 Daofeng Li 
GSM733712_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
134 8c368a17 Daofeng Li 
GSM973679_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
135 8c368a17 Daofeng Li 
GSM822290_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
136 8c368a17 Daofeng Li 
GSM736501_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
137 8c368a17 Daofeng Li 
GSM803498_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
138 8c368a17 Daofeng Li 
GSM973672_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
139 8c368a17 Daofeng Li 
GSM945197_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
140 8c368a17 Daofeng Li 
GSM736522_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
141 8c368a17 Daofeng Li 
GSM605634_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
142 8c368a17 Daofeng Li 
GSM935364_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
143 8c368a17 Daofeng Li 
GSM831023_1	Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters.  Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)).  Reads were extended to 200 bp using the -e parameter, otherwise defaults were used.  The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp.
144 8c368a17 Daofeng Li 
GSM935401_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
145 8c368a17 Daofeng Li 
GSM935413_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
146 8c368a17 Daofeng Li 
GSM935569_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
147 8c368a17 Daofeng Li 
GSM973663_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
148 8c368a17 Daofeng Li 
GSM817343_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
149 8c368a17 Daofeng Li 
GSM646561_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
150 8c368a17 Daofeng Li 
GSM733658_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
151 8c368a17 Daofeng Li 
GSM803371_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
152 8c368a17 Daofeng Li 
GSM849342_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
153 8c368a17 Daofeng Li 
GSM803359_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
154 8c368a17 Daofeng Li 
GSM733697_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
155 8c368a17 Daofeng Li 
GSM765405_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
156 8c368a17 Daofeng Li 
GSM849365_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
157 8c368a17 Daofeng Li 
GSM945180_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
158 8c368a17 Daofeng Li 
GSM803380_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
159 8c368a17 Daofeng Li 
GSM733706_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
160 8c368a17 Daofeng Li 
GSM945205_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
161 8c368a17 Daofeng Li 
GSM798321_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
162 8c368a17 Daofeng Li 
GSM945281_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
163 8c368a17 Daofeng Li 
GSM733646_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
164 8c368a17 Daofeng Li 
GSM977042_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
165 8c368a17 Daofeng Li 
GSM935319_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
166 8c368a17 Daofeng Li 
GSM864342_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
167 8c368a17 Daofeng Li 
GSM935637_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
168 8c368a17 Daofeng Li 
GSM605628_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
169 8c368a17 Daofeng Li 
GSM864346_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
170 8c368a17 Daofeng Li 
GSM758564_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
171 8c368a17 Daofeng Li 
GSM935524_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
172 8c368a17 Daofeng Li 
GSM897074_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
173 8c368a17 Daofeng Li 
GSM803475_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
174 8c368a17 Daofeng Li 
GSM749762_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
175 8c368a17 Daofeng Li 
GSM849326_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
176 8c368a17 Daofeng Li 
GSM935457_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
177 8c368a17 Daofeng Li 
GSM973684_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
178 8c368a17 Daofeng Li 
GSM945174_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
179 8c368a17 Daofeng Li 
GSM831041_1	Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters.  Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)).  Reads were extended to 200 bp using the -e parameter, otherwise defaults were used.  The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp.
180 8c368a17 Daofeng Li 
GSM733729_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
181 8c368a17 Daofeng Li 
GSM803364_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
182 8c368a17 Daofeng Li 
GSM973675_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
183 8c368a17 Daofeng Li 
GSM923444_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
184 8c368a17 Daofeng Li 
GSM935371_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
185 8c368a17 Daofeng Li 
GSM945203_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
186 8c368a17 Daofeng Li 
GSM897076_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
187 8c368a17 Daofeng Li 
GSM864354_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
188 8c368a17 Daofeng Li 
GSM733751_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
189 8c368a17 Daofeng Li 
GSM945242_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
190 8c368a17 Daofeng Li 
GSM935366_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
191 8c368a17 Daofeng Li 
GSM803418_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
192 8c368a17 Daofeng Li 
GSM803348_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
193 8c368a17 Daofeng Li 
GSM849361_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
194 8c368a17 Daofeng Li 
GSM977041_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
195 8c368a17 Daofeng Li 
GSM803428_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
196 8c368a17 Daofeng Li 
GSM935297_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
197 8c368a17 Daofeng Li 
GSM749698_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
198 8c368a17 Daofeng Li 
GSM945280_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
199 8c368a17 Daofeng Li 
GSM923436_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq
200 8c368a17 Daofeng Li 
GSM803336_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
201 8c368a17 Daofeng Li 
GSM935295_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
202 8c368a17 Daofeng Li 
GSM733637_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
203 8c368a17 Daofeng Li 
GSM749752_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
204 8c368a17 Daofeng Li 
GSM736603_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
205 8c368a17 Daofeng Li 
GSM803428_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
206 8c368a17 Daofeng Li 
GSM765392_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
207 8c368a17 Daofeng Li 
GSM605633_5	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
208 8c368a17 Daofeng Li 
GSM788069_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhHistone
209 8c368a17 Daofeng Li 
GSM758560_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
210 8c368a17 Daofeng Li 
GSM945326_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
211 8c368a17 Daofeng Li 
GSM945273_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
212 8c368a17 Daofeng Li 
GSM788082_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhHistone
213 8c368a17 Daofeng Li 
GSM945185_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
214 8c368a17 Daofeng Li 
GSM605630_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
215 8c368a17 Daofeng Li 
GSM897086_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
216 8c368a17 Daofeng Li 
GSM935328_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
217 8c368a17 Daofeng Li 
GSM803472_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
218 8c368a17 Daofeng Li 
GSM733745_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
219 8c368a17 Daofeng Li 
GSM935544_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
220 8c368a17 Daofeng Li 
GSM830523_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
221 8c368a17 Daofeng Li 
GSM782123_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
222 8c368a17 Daofeng Li 
GSM749769_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
223 8c368a17 Daofeng Li 
GSM822300_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
224 8c368a17 Daofeng Li 
GSM923425_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq
225 8c368a17 Daofeng Li 
GSM973678_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
226 8c368a17 Daofeng Li 
GSM945231_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
227 8c368a17 Daofeng Li 
GSM849031_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
228 8c368a17 Daofeng Li 
GSM736609_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
229 8c368a17 Daofeng Li 
GSM749727_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
230 8c368a17 Daofeng Li 
GSM803433_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
231 8c368a17 Daofeng Li 
GSM945258_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
232 8c368a17 Daofeng Li 
GSM822309_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
233 8c368a17 Daofeng Li 
GSM935515_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
234 8c368a17 Daofeng Li 
GSM749731_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
235 8c368a17 Daofeng Li 
GSM803385_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
236 8c368a17 Daofeng Li 
GSM803494_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
237 8c368a17 Daofeng Li 
GSM935284_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
238 8c368a17 Daofeng Li 
GSM830526_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
239 8c368a17 Daofeng Li 
GSM935385_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
240 8c368a17 Daofeng Li 
GSM803340_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
241 8c368a17 Daofeng Li 
GSM864347_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
242 8c368a17 Daofeng Li 
GSM803516_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
243 8c368a17 Daofeng Li 
GSM733663_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
244 8c368a17 Daofeng Li 
GSM736518_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
245 8c368a17 Daofeng Li 
GSM945284_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
246 8c368a17 Daofeng Li 
GSM803389_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
247 8c368a17 Daofeng Li 
GSM831027_1	Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters.  Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)).  Reads were extended to 200 bp using the -e parameter, otherwise defaults were used.  The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp.
248 8c368a17 Daofeng Li 
GSM749716_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
249 8c368a17 Daofeng Li 
GSM945208_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
250 8c368a17 Daofeng Li 
GSM765400_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
251 8c368a17 Daofeng Li 
GSM923442_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
252 8c368a17 Daofeng Li 
GSM765395_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
253 8c368a17 Daofeng Li 
GSM767856_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
254 8c368a17 Daofeng Li 
GSM935313_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
255 8c368a17 Daofeng Li 
GSM803356_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
256 8c368a17 Daofeng Li 
GSM803449_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
257 8c368a17 Daofeng Li 
GSM822294_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
258 8c368a17 Daofeng Li 
GSM945297_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
259 8c368a17 Daofeng Li 
GSM803376_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
260 8c368a17 Daofeng Li 
GSM935471_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
261 8c368a17 Daofeng Li 
GSM803339_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
262 8c368a17 Daofeng Li 
GSM831033_1	Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters.  Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)).  Reads were extended to 200 bp using the -e parameter, otherwise defaults were used.  The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp.
263 8c368a17 Daofeng Li 
GSM816637_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
264 8c368a17 Daofeng Li 
GSM803436_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
265 8c368a17 Daofeng Li 
GSM830533_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
266 8c368a17 Daofeng Li 
GSM849328_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
267 8c368a17 Daofeng Li 
GSM749776_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
268 8c368a17 Daofeng Li 
GSM733739_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
269 8c368a17 Daofeng Li 
GSM736639_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
270 8c368a17 Daofeng Li 
GSM831024_1	Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters.  Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)).  Reads were extended to 200 bp using the -e parameter, otherwise defaults were used.  The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp.
271 8c368a17 Daofeng Li 
GSM736619_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
272 8c368a17 Daofeng Li 
GSM803542_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
273 8c368a17 Daofeng Li 
GSM736513_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
274 8c368a17 Daofeng Li 
GSM945300_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
275 8c368a17 Daofeng Li 
GSM945311_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
276 8c368a17 Daofeng Li 
GSM923425_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq
277 8c368a17 Daofeng Li 
GSM736556_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
278 8c368a17 Daofeng Li 
GSM733753_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
279 8c368a17 Daofeng Li 
GSM605630_6	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
280 8c368a17 Daofeng Li 
GSM849365_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
281 8c368a17 Daofeng Li 
GSM935458_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
282 8c368a17 Daofeng Li 
GSM977049_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
283 8c368a17 Daofeng Li 
GSM830535_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
284 8c368a17 Daofeng Li 
GSM923426_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq
285 8c368a17 Daofeng Li 
GSM831039_1	Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters.  Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)).  Reads were extended to 200 bp using the -e parameter, otherwise defaults were used.  The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp.
286 8c368a17 Daofeng Li 
GSM958748_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq
287 8c368a17 Daofeng Li 
GSM923441_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
288 8c368a17 Daofeng Li 
GSM822306_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
289 8c368a17 Daofeng Li 
GSM958733_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq
290 8c368a17 Daofeng Li 
GSM767846_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
291 8c368a17 Daofeng Li 
GSM945207_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
292 8c368a17 Daofeng Li 
GSM849366_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
293 8c368a17 Daofeng Li 
GSM935593_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
294 8c368a17 Daofeng Li 
GSM817342_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
295 8c368a17 Daofeng Li 
GSM935302_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
296 8c368a17 Daofeng Li 
GSM831032_1	Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters.  Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)).  Reads were extended to 200 bp using the -e parameter, otherwise defaults were used.  The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp.
297 8c368a17 Daofeng Li 
GSM749704_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
298 8c368a17 Daofeng Li 
GSM803528_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
299 8c368a17 Daofeng Li 
GSM765404_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
300 8c368a17 Daofeng Li 
GSM935570_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
301 8c368a17 Daofeng Li 
GSM803354_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
302 8c368a17 Daofeng Li 
GSM945261_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
303 8c368a17 Daofeng Li 
GSM803408_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
304 8c368a17 Daofeng Li 
GSM897085_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
305 8c368a17 Daofeng Li 
GSM945162_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
306 8c368a17 Daofeng Li 
GSM973692_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
307 8c368a17 Daofeng Li 
GSM945168_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
308 8c368a17 Daofeng Li 
GSM803460_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
309 8c368a17 Daofeng Li 
GSM945209_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
310 8c368a17 Daofeng Li 
GSM945211_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
311 8c368a17 Daofeng Li 
GSM836271_1	Software=Bowtie, Cufflinks
312 8c368a17 Daofeng Li 
GSM935607_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
313 8c368a17 Daofeng Li 
GSM935379_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
314 8c368a17 Daofeng Li 
GSM923423_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq
315 8c368a17 Daofeng Li 
GSM736521_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
316 8c368a17 Daofeng Li 
GSM749767_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
317 8c368a17 Daofeng Li 
GSM749708_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
318 8c368a17 Daofeng Li 
GSM816672_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
319 8c368a17 Daofeng Li 
GSM945187_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
320 8c368a17 Daofeng Li 
GSM733656_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
321 8c368a17 Daofeng Li 
GSM849356_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
322 8c368a17 Daofeng Li 
GSM803459_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
323 8c368a17 Daofeng Li 
GSM849367_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
324 8c368a17 Daofeng Li 
GSM758573_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
325 8c368a17 Daofeng Li 
GSM923451_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
326 8c368a17 Daofeng Li 
GSM749765_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
327 8c368a17 Daofeng Li 
GSM849026_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
328 8c368a17 Daofeng Li 
GSM935434_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
329 8c368a17 Daofeng Li 
GSM977048_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
330 8c368a17 Daofeng Li 
GSM605635_6	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
331 8c368a17 Daofeng Li 
GSM765388_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
332 8c368a17 Daofeng Li 
GSM977043_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
333 8c368a17 Daofeng Li 
GSM945288_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
334 8c368a17 Daofeng Li 
GSM803404_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
335 8c368a17 Daofeng Li 
GSM849352_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
336 8c368a17 Daofeng Li 
GSM945246_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
337 8c368a17 Daofeng Li 
GSM736551_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
338 8c368a17 Daofeng Li 
GSM733780_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
339 8c368a17 Daofeng Li 
GSM945287_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
340 8c368a17 Daofeng Li 
GSM897081_8	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
341 8c368a17 Daofeng Li 
GSM803526_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
342 8c368a17 Daofeng Li 
GSM822287_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
343 8c368a17 Daofeng Li 
GSM977048_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
344 8c368a17 Daofeng Li 
GSM803454_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
345 8c368a17 Daofeng Li 
GSM945322_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
346 8c368a17 Daofeng Li 
GSM935551_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
347 8c368a17 Daofeng Li 
GSM822272_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
348 8c368a17 Daofeng Li 
GSM923450_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
349 8c368a17 Daofeng Li 
GSM758565_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
350 8c368a17 Daofeng Li 
GSM749766_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
351 8c368a17 Daofeng Li 
GSM803417_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
352 8c368a17 Daofeng Li 
GSM831044_1	Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters.  Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)).  Reads were extended to 200 bp using the -e parameter, otherwise defaults were used.  The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp.
353 8c368a17 Daofeng Li 
GSM945315_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
354 8c368a17 Daofeng Li 
GSM822287_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
355 8c368a17 Daofeng Li 
GSM767840_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
356 8c368a17 Daofeng Li 
GSM749689_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
357 8c368a17 Daofeng Li 
GSM958733_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq
358 8c368a17 Daofeng Li 
GSM822294_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
359 8c368a17 Daofeng Li 
GSM977040_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
360 8c368a17 Daofeng Li 
GSM945226_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
361 8c368a17 Daofeng Li 
GSM849325_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
362 8c368a17 Daofeng Li 
GSM733643_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
363 8c368a17 Daofeng Li 
GSM977031_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
364 8c368a17 Daofeng Li 
GSM935346_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
365 8c368a17 Daofeng Li 
GSM803435_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
366 8c368a17 Daofeng Li 
GSM849365_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
367 8c368a17 Daofeng Li 
GSM733765_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
368 8c368a17 Daofeng Li 
GSM733708_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
369 8c368a17 Daofeng Li 
GSM945165_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
370 8c368a17 Daofeng Li 
GSM935399_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
371 8c368a17 Daofeng Li 
GSM736623_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
372 8c368a17 Daofeng Li 
GSM767839_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
373 8c368a17 Daofeng Li 
GSM973689_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
374 8c368a17 Daofeng Li 
GSM736557_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
375 8c368a17 Daofeng Li 
GSM935564_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
376 8c368a17 Daofeng Li 
GSM767844_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
377 8c368a17 Daofeng Li 
GSM788075_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhHistone
378 8c368a17 Daofeng Li 
GSM973665_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
379 8c368a17 Daofeng Li 
GSM935517_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
380 8c368a17 Daofeng Li 
GSM765393_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
381 8c368a17 Daofeng Li 
GSM733692_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
382 8c368a17 Daofeng Li 
GSM935300_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
383 8c368a17 Daofeng Li 
GSM977042_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
384 8c368a17 Daofeng Li 
GSM767840_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
385 8c368a17 Daofeng Li 
GSM945228_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
386 8c368a17 Daofeng Li 
GSM733660_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
387 8c368a17 Daofeng Li 
GSM816626_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
388 8c368a17 Daofeng Li 
GSM831012_1	Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters.  Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)).  Reads were extended to 200 bp using the -e parameter, otherwise defaults were used.  The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp.
389 8c368a17 Daofeng Li 
GSM864361_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
390 8c368a17 Daofeng Li 
GSM803535_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
391 8c368a17 Daofeng Li 
GSM923446_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
392 8c368a17 Daofeng Li 
GSM672834_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaSeq
393 8c368a17 Daofeng Li 
GSM758565_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
394 8c368a17 Daofeng Li 
GSM945316_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
395 8c368a17 Daofeng Li 
GSM849301_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
396 8c368a17 Daofeng Li 
GSM935650_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
397 8c368a17 Daofeng Li 
GSM935627_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
398 8c368a17 Daofeng Li 
GSM733786_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
399 8c368a17 Daofeng Li 
GSM830534_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
400 8c368a17 Daofeng Li 
GSM935347_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
401 8c368a17 Daofeng Li 
GSM923441_5	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
402 8c368a17 Daofeng Li 
GSM935416_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
403 8c368a17 Daofeng Li 
GSM605625_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
404 8c368a17 Daofeng Li 
GSM922958_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhRnaSeq
405 8c368a17 Daofeng Li 
GSM803443_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
406 8c368a17 Daofeng Li 
GSM765405_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
407 8c368a17 Daofeng Li 
GSM977052_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
408 8c368a17 Daofeng Li 
GSM897074_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
409 8c368a17 Daofeng Li 
GSM945188_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
410 8c368a17 Daofeng Li 
GSM923449_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
411 8c368a17 Daofeng Li 
GSM803346_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
412 8c368a17 Daofeng Li 
GSM605627_6	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
413 8c368a17 Daofeng Li 
GSM923442_7	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
414 8c368a17 Daofeng Li 
GSM830528_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
415 8c368a17 Daofeng Li 
GSM733680_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
416 8c368a17 Daofeng Li 
GSM935604_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
417 8c368a17 Daofeng Li 
GSM646568_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
418 8c368a17 Daofeng Li 
GSM758559_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
419 8c368a17 Daofeng Li 
GSM897079_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
420 8c368a17 Daofeng Li 
GSM923452_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
421 8c368a17 Daofeng Li 
GSM749723_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
422 8c368a17 Daofeng Li 
GSM923440_6	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
423 8c368a17 Daofeng Li 
GSM973690_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
424 8c368a17 Daofeng Li 
GSM803399_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
425 8c368a17 Daofeng Li 
GSM765401_6	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
426 8c368a17 Daofeng Li 
GSM897079_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
427 8c368a17 Daofeng Li 
GSM977037_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
428 8c368a17 Daofeng Li 
GSM736613_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
429 8c368a17 Daofeng Li 
GSM765397_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
430 8c368a17 Daofeng Li 
GSM923421_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq
431 8c368a17 Daofeng Li 
GSM765398_6	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
432 8c368a17 Daofeng Li 
GSM864354_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
433 8c368a17 Daofeng Li 
GSM803529_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
434 8c368a17 Daofeng Li 
GSM736596_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
435 8c368a17 Daofeng Li 
GSM803401_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
436 8c368a17 Daofeng Li 
GSM977051_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
437 8c368a17 Daofeng Li 
GSM816654_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
438 8c368a17 Daofeng Li 
GSM803438_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
439 8c368a17 Daofeng Li 
GSM831029_1	Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters.  Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)).  Reads were extended to 200 bp using the -e parameter, otherwise defaults were used.  The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp.
440 8c368a17 Daofeng Li 
GSM849343_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
441 8c368a17 Daofeng Li 
GSM977043_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
442 8c368a17 Daofeng Li 
GSM733690_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
443 8c368a17 Daofeng Li 
GSM923448_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
444 8c368a17 Daofeng Li 
GSM923442_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
445 8c368a17 Daofeng Li 
GSM923448_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
446 8c368a17 Daofeng Li 
GSM935472_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
447 8c368a17 Daofeng Li 
GSM923450_5	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
448 8c368a17 Daofeng Li 
GSM849343_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
449 8c368a17 Daofeng Li 
GSM973667_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
450 8c368a17 Daofeng Li 
GSM935625_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
451 8c368a17 Daofeng Li 
GSM923444_8	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
452 8c368a17 Daofeng Li 
GSM733777_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
453 8c368a17 Daofeng Li 
GSM822312_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
454 8c368a17 Daofeng Li 
GSM847567_1	Software=Bowtie, Cufflinks
455 8c368a17 Daofeng Li 
GSM849325_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
456 8c368a17 Daofeng Li 
GSM977047_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
457 8c368a17 Daofeng Li 
GSM977035_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
458 8c368a17 Daofeng Li 
GSM758573_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
459 8c368a17 Daofeng Li 
GSM849349_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
460 8c368a17 Daofeng Li 
GSM803362_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
461 8c368a17 Daofeng Li 
GSM803534_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
462 8c368a17 Daofeng Li 
GSM816657_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
463 8c368a17 Daofeng Li 
GSM977031_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
464 8c368a17 Daofeng Li 
GSM646570_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
465 8c368a17 Daofeng Li 
GSM935462_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
466 8c368a17 Daofeng Li 
GSM803499_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
467 8c368a17 Daofeng Li 
GSM733719_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
468 8c368a17 Daofeng Li 
GSM758569_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
469 8c368a17 Daofeng Li 
GSM830527_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
470 8c368a17 Daofeng Li 
GSM803484_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
471 8c368a17 Daofeng Li 
GSM945160_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
472 8c368a17 Daofeng Li 
GSM822298_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
473 8c368a17 Daofeng Li 
GSM935613_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
474 8c368a17 Daofeng Li 
GSM605627_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
475 8c368a17 Daofeng Li 
GSM822295_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
476 8c368a17 Daofeng Li 
GSM733662_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
477 8c368a17 Daofeng Li 
GSM736514_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
478 8c368a17 Daofeng Li 
GSM973688_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
479 8c368a17 Daofeng Li 
GSM605635_5	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
480 8c368a17 Daofeng Li 
GSM830525_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
481 8c368a17 Daofeng Li 
GSM831034_1	Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters.  Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)).  Reads were extended to 200 bp using the -e parameter, otherwise defaults were used.  The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp.
482 8c368a17 Daofeng Li 
GSM749690_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
483 8c368a17 Daofeng Li 
GSM849362_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
484 8c368a17 Daofeng Li 
GSM803540_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
485 8c368a17 Daofeng Li 
GSM831019_1	Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters.  Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)).  Reads were extended to 200 bp using the -e parameter, otherwise defaults were used.  The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp.
486 8c368a17 Daofeng Li 
GSM803491_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
487 8c368a17 Daofeng Li 
GSM973676_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
488 8c368a17 Daofeng Li 
GSM736526_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
489 8c368a17 Daofeng Li 
GSM935559_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
490 8c368a17 Daofeng Li 
GSM923440_5	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
491 8c368a17 Daofeng Li 
GSM973691_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
492 8c368a17 Daofeng Li 
GSM849328_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
493 8c368a17 Daofeng Li 
GSM765396_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
494 8c368a17 Daofeng Li 
GSM822285_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
495 8c368a17 Daofeng Li 
GSM849368_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
496 8c368a17 Daofeng Li 
GSM973681_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
497 8c368a17 Daofeng Li 
GSM605632_5	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
498 8c368a17 Daofeng Li 
GSM733772_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
499 8c368a17 Daofeng Li 
GSM767855_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
500 8c368a17 Daofeng Li 
GSM803517_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
501 8c368a17 Daofeng Li 
GSM973686_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
502 8c368a17 Daofeng Li 
GSM935418_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
503 8c368a17 Daofeng Li 
GSM767850_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
504 8c368a17 Daofeng Li 
GSM849346_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
505 8c368a17 Daofeng Li 
GSM758562_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
506 8c368a17 Daofeng Li 
GSM923451_6	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
507 8c368a17 Daofeng Li 
GSM935580_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
508 8c368a17 Daofeng Li 
GSM816629_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
509 8c368a17 Daofeng Li 
GSM935638_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
510 8c368a17 Daofeng Li 
GSM958739_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq
511 8c368a17 Daofeng Li 
GSM816438_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
512 8c368a17 Daofeng Li 
GSM864357_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
513 8c368a17 Daofeng Li 
GSM767854_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
514 8c368a17 Daofeng Li 
GSM849348_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
515 8c368a17 Daofeng Li 
GSM733758_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
516 8c368a17 Daofeng Li 
GSM749688_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
517 8c368a17 Daofeng Li 
GSM935494_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
518 8c368a17 Daofeng Li 
GSM973679_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
519 8c368a17 Daofeng Li 
GSM973692_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
520 8c368a17 Daofeng Li 
GSM605633_6	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
521 8c368a17 Daofeng Li 
GSM973681_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
522 8c368a17 Daofeng Li 
GSM958746_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq
523 8c368a17 Daofeng Li 
GSM973670_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
524 8c368a17 Daofeng Li 
GSM803347_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
525 8c368a17 Daofeng Li 
GSM765395_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
526 8c368a17 Daofeng Li 
GSM977046_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
527 8c368a17 Daofeng Li 
GSM816670_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
528 8c368a17 Daofeng Li 
GSM935619_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
529 8c368a17 Daofeng Li 
GSM803500_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
530 8c368a17 Daofeng Li 
GSM816651_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
531 8c368a17 Daofeng Li 
GSM945262_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
532 8c368a17 Daofeng Li 
GSM830519_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
533 8c368a17 Daofeng Li 
GSM977039_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
534 8c368a17 Daofeng Li 
GSM816629_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
535 8c368a17 Daofeng Li 
GSM830535_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
536 8c368a17 Daofeng Li 
GSM973674_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
537 8c368a17 Daofeng Li 
GSM803521_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
538 8c368a17 Daofeng Li 
GSM897079_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
539 8c368a17 Daofeng Li 
GSM935518_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
540 8c368a17 Daofeng Li 
GSM767849_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
541 8c368a17 Daofeng Li 
GSM935644_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
542 8c368a17 Daofeng Li 
GSM733723_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
543 8c368a17 Daofeng Li 
GSM803372_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
544 8c368a17 Daofeng Li 
GSM803354_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
545 8c368a17 Daofeng Li 
GSM973667_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
546 8c368a17 Daofeng Li 
GSM749714_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
547 8c368a17 Daofeng Li 
GSM935435_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
548 8c368a17 Daofeng Li 
GSM765395_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
549 8c368a17 Daofeng Li 
GSM935611_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
550 8c368a17 Daofeng Li 
GSM849355_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
551 8c368a17 Daofeng Li 
GSM840136_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
552 8c368a17 Daofeng Li 
GSM816634_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
553 8c368a17 Daofeng Li 
GSM803378_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
554 8c368a17 Daofeng Li 
GSM736543_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
555 8c368a17 Daofeng Li 
GSM803337_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
556 8c368a17 Daofeng Li 
GSM816636_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
557 8c368a17 Daofeng Li 
GSM736622_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
558 8c368a17 Daofeng Li 
GSM849367_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
559 8c368a17 Daofeng Li 
GSM816644_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
560 8c368a17 Daofeng Li 
GSM897076_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
561 8c368a17 Daofeng Li 
GSM849029_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
562 8c368a17 Daofeng Li 
GSM822304_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
563 8c368a17 Daofeng Li 
GSM767848_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
564 8c368a17 Daofeng Li 
GSM816666_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
565 8c368a17 Daofeng Li 
GSM923449_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
566 8c368a17 Daofeng Li 
GSM803463_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
567 8c368a17 Daofeng Li 
GSM840138_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
568 8c368a17 Daofeng Li 
GSM958730_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq
569 8c368a17 Daofeng Li 
GSM822303_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
570 8c368a17 Daofeng Li 
GSM973682_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
571 8c368a17 Daofeng Li 
GSM935289_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
572 8c368a17 Daofeng Li 
GSM733704_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
573 8c368a17 Daofeng Li 
GSM849364_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
574 8c368a17 Daofeng Li 
GSM733721_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
575 8c368a17 Daofeng Li 
GSM803452_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
576 8c368a17 Daofeng Li 
GSM736611_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
577 8c368a17 Daofeng Li 
GSM733636_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
578 8c368a17 Daofeng Li 
GSM767838_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
579 8c368a17 Daofeng Li 
GSM945299_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
580 8c368a17 Daofeng Li 
GSM897069_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
581 8c368a17 Daofeng Li 
GSM605629_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
582 8c368a17 Daofeng Li 
GSM803448_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
583 8c368a17 Daofeng Li 
GSM803382_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
584 8c368a17 Daofeng Li 
GSM816650_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
585 8c368a17 Daofeng Li 
GSM749768_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
586 8c368a17 Daofeng Li 
GSM935286_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
587 8c368a17 Daofeng Li 
GSM803412_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
588 8c368a17 Daofeng Li 
GSM803485_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
589 8c368a17 Daofeng Li 
GSM749712_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
590 8c368a17 Daofeng Li 
GSM803352_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
591 8c368a17 Daofeng Li 
GSM803487_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
592 8c368a17 Daofeng Li 
GSM923430_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq
593 8c368a17 Daofeng Li 
GSM736577_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
594 8c368a17 Daofeng Li 
GSM935353_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
595 8c368a17 Daofeng Li 
GSM803506_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
596 8c368a17 Daofeng Li 
GSM733742_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
597 8c368a17 Daofeng Li 
GSM749732_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
598 8c368a17 Daofeng Li 
GSM803416_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
599 8c368a17 Daofeng Li 
GSM935402_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
600 8c368a17 Daofeng Li 
GSM973681_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
601 8c368a17 Daofeng Li 
GSM765387_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
602 8c368a17 Daofeng Li 
GSM733674_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
603 8c368a17 Daofeng Li 
GSM977041_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
604 8c368a17 Daofeng Li 
GSM646563_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
605 8c368a17 Daofeng Li 
GSM822311_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
606 8c368a17 Daofeng Li 
GSM958738_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq
607 8c368a17 Daofeng Li 
GSM945172_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
608 8c368a17 Daofeng Li 
GSM935468_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
609 8c368a17 Daofeng Li 
GSM935597_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
610 8c368a17 Daofeng Li 
GSM822289_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
611 8c368a17 Daofeng Li 
GSM736560_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
612 8c368a17 Daofeng Li 
GSM923450_8	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
613 8c368a17 Daofeng Li 
GSM849303_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
614 8c368a17 Daofeng Li 
GSM767855_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
615 8c368a17 Daofeng Li 
GSM736595_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
616 8c368a17 Daofeng Li 
GSM803493_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
617 8c368a17 Daofeng Li 
GSM973693_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
618 8c368a17 Daofeng Li 
GSM849328_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
619 8c368a17 Daofeng Li 
GSM935547_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
620 8c368a17 Daofeng Li 
GSM803396_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
621 8c368a17 Daofeng Li 
GSM849333_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
622 8c368a17 Daofeng Li 
GSM977045_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
623 8c368a17 Daofeng Li 
GSM923444_12	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
624 8c368a17 Daofeng Li 
GSM803519_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
625 8c368a17 Daofeng Li 
GSM803446_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
626 8c368a17 Daofeng Li 
GSM803537_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
627 8c368a17 Daofeng Li 
GSM958746_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq
628 8c368a17 Daofeng Li 
GSM803467_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
629 8c368a17 Daofeng Li 
GSM935274_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
630 8c368a17 Daofeng Li 
GSM830520_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
631 8c368a17 Daofeng Li 
GSM831006_1	Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters.  Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)).  Reads were extended to 200 bp using the -e parameter, otherwise defaults were used.  The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp.
632 8c368a17 Daofeng Li 
GSM923425_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq
633 8c368a17 Daofeng Li 
GSM816632_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
634 8c368a17 Daofeng Li 
GSM803524_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
635 8c368a17 Daofeng Li 
GSM945240_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
636 8c368a17 Daofeng Li 
GSM765389_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
637 8c368a17 Daofeng Li 
GSM803366_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
638 8c368a17 Daofeng Li 
GSM849363_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
639 8c368a17 Daofeng Li 
GSM749694_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
640 8c368a17 Daofeng Li 
GSM922956_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhRnaSeq
641 8c368a17 Daofeng Li 
GSM605635_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
642 8c368a17 Daofeng Li 
GSM945222_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
643 8c368a17 Daofeng Li 
GSM803387_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
644 8c368a17 Daofeng Li 
GSM945196_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
645 8c368a17 Daofeng Li 
GSM977038_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
646 8c368a17 Daofeng Li 
GSM944522_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSunyRipSeq
647 8c368a17 Daofeng Li 
GSM864347_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
648 8c368a17 Daofeng Li 
GSM935389_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
649 8c368a17 Daofeng Li 
GSM945264_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
650 8c368a17 Daofeng Li 
GSM958744_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq
651 8c368a17 Daofeng Li 
GSM935342_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
652 8c368a17 Daofeng Li 
GSM935394_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
653 8c368a17 Daofeng Li 
GSM767848_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
654 8c368a17 Daofeng Li 
GSM977048_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
655 8c368a17 Daofeng Li 
GSM945286_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
656 8c368a17 Daofeng Li 
GSM864341_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
657 8c368a17 Daofeng Li 
GSM749706_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
658 8c368a17 Daofeng Li 
GSM749677_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
659 8c368a17 Daofeng Li 
GSM803492_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
660 8c368a17 Daofeng Li 
GSM803510_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
661 8c368a17 Daofeng Li 
GSM935372_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
662 8c368a17 Daofeng Li 
GSM803387_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
663 8c368a17 Daofeng Li 
GSM849331_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
664 8c368a17 Daofeng Li 
GSM607486_1	Alignment=Sequence reads were obtained and mapped to the human genome assembly hg18 (March, 2006) or hg19 (February, 2009) using the Illumina Genome Analyzer Pipeline. All reads mapping with two or fewer mismatches were retained and read starts were summed in sliding windows of 400 bp to create summary windows.; Peak Calling=Peaks were called with Sole-Search (http://chipseq.genomecenter.ucdavis.edu/cgi-bin/chipseq.cgi)
665 8c368a17 Daofeng Li 
GSM646559_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
666 8c368a17 Daofeng Li 
GSM803367_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
667 8c368a17 Daofeng Li 
GSM923444_9	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
668 8c368a17 Daofeng Li 
GSM803409_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
669 8c368a17 Daofeng Li 
GSM935287_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
670 8c368a17 Daofeng Li 
GSM973692_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
671 8c368a17 Daofeng Li 
GSM733648_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
672 8c368a17 Daofeng Li 
GSM945250_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
673 8c368a17 Daofeng Li 
GSM935428_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
674 8c368a17 Daofeng Li 
GSM897083_7	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
675 8c368a17 Daofeng Li 
GSM822283_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
676 8c368a17 Daofeng Li 
GSM822295_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
677 8c368a17 Daofeng Li 
GSM945276_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
678 8c368a17 Daofeng Li 
GSM736629_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
679 8c368a17 Daofeng Li 
GSM803365_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
680 8c368a17 Daofeng Li 
GSM803358_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
681 8c368a17 Daofeng Li 
GSM897078_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
682 8c368a17 Daofeng Li 
GSM830520_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
683 8c368a17 Daofeng Li 
GSM935427_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
684 8c368a17 Daofeng Li 
GSM973685_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
685 8c368a17 Daofeng Li 
GSM923449_8	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
686 8c368a17 Daofeng Li 
GSM803359_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
687 8c368a17 Daofeng Li 
GSM736541_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
688 8c368a17 Daofeng Li 
GSM923450_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
689 8c368a17 Daofeng Li 
GSM736499_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
690 8c368a17 Daofeng Li 
GSM816646_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
691 8c368a17 Daofeng Li 
GSM849028_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
692 8c368a17 Daofeng Li 
GSM803392_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
693 8c368a17 Daofeng Li 
GSM849349_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
694 8c368a17 Daofeng Li 
GSM803343_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
695 8c368a17 Daofeng Li 
GSM736507_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
696 8c368a17 Daofeng Li 
GSM803394_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
697 8c368a17 Daofeng Li 
GSM736545_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
698 8c368a17 Daofeng Li 
GSM803461_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
699 8c368a17 Daofeng Li 
GSM767849_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
700 8c368a17 Daofeng Li 
GSM958745_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq
701 8c368a17 Daofeng Li 
GSM897070_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
702 8c368a17 Daofeng Li 
GSM977045_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
703 8c368a17 Daofeng Li 
GSM749693_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
704 8c368a17 Daofeng Li 
GSM923421_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq
705 8c368a17 Daofeng Li 
GSM749666_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
706 8c368a17 Daofeng Li 
GSM923447_8	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
707 8c368a17 Daofeng Li 
GSM849026_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
708 8c368a17 Daofeng Li 
GSM847563_1	Software=Bowtie, Cufflinks
709 8c368a17 Daofeng Li 
GSM849334_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
710 8c368a17 Daofeng Li 
GSM749761_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
711 8c368a17 Daofeng Li 
GSM849325_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
712 8c368a17 Daofeng Li 
GSM958749_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq
713 8c368a17 Daofeng Li 
GSM945173_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
714 8c368a17 Daofeng Li 
GSM803444_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
715 8c368a17 Daofeng Li 
GSM733638_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
716 8c368a17 Daofeng Li 
GSM935306_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
717 8c368a17 Daofeng Li 
GSM897075_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
718 8c368a17 Daofeng Li 
GSM803504_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
719 8c368a17 Daofeng Li 
GSM945192_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
720 8c368a17 Daofeng Li 
GSM733650_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
721 8c368a17 Daofeng Li 
GSM816630_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
722 8c368a17 Daofeng Li 
GSM733778_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
723 8c368a17 Daofeng Li 
GSM923423_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq
724 8c368a17 Daofeng Li 
GSM864345_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
725 8c368a17 Daofeng Li 
GSM935542_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
726 8c368a17 Daofeng Li 
GSM945297_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
727 8c368a17 Daofeng Li 
GSM849345_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
728 8c368a17 Daofeng Li 
GSM935469_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
729 8c368a17 Daofeng Li 
GSM849348_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
730 8c368a17 Daofeng Li 
GSM803430_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
731 8c368a17 Daofeng Li 
GSM977042_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
732 8c368a17 Daofeng Li 
GSM803518_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
733 8c368a17 Daofeng Li 
GSM849335_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
734 8c368a17 Daofeng Li 
GSM749668_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
735 8c368a17 Daofeng Li 
GSM935326_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
736 8c368a17 Daofeng Li 
GSM935445_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
737 8c368a17 Daofeng Li 
GSM803513_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
738 8c368a17 Daofeng Li 
GSM945206_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
739 8c368a17 Daofeng Li 
GSM849348_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
740 8c368a17 Daofeng Li 
GSM733784_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
741 8c368a17 Daofeng Li 
GSM758565_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
742 8c368a17 Daofeng Li 
GSM958739_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq
743 8c368a17 Daofeng Li 
GSM803391_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
744 8c368a17 Daofeng Li 
GSM822272_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
745 8c368a17 Daofeng Li 
GSM945235_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
746 8c368a17 Daofeng Li 
GSM803503_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
747 8c368a17 Daofeng Li 
GSM803460_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
748 8c368a17 Daofeng Li 
GSM923446_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
749 8c368a17 Daofeng Li 
GSM803352_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
750 8c368a17 Daofeng Li 
GSM736579_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
751 8c368a17 Daofeng Li 
GSM935574_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
752 8c368a17 Daofeng Li 
GSM945206_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
753 8c368a17 Daofeng Li 
GSM830527_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
754 8c368a17 Daofeng Li 
GSM945308_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
755 8c368a17 Daofeng Li 
GSM945252_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
756 8c368a17 Daofeng Li 
GSM803478_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
757 8c368a17 Daofeng Li 
GSM803507_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
758 8c368a17 Daofeng Li 
GSM897080_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
759 8c368a17 Daofeng Li 
GSM849347_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
760 8c368a17 Daofeng Li 
GSM822304_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
761 8c368a17 Daofeng Li 
GSM945263_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
762 8c368a17 Daofeng Li 
GSM935461_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
763 8c368a17 Daofeng Li 
GSM935420_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
764 8c368a17 Daofeng Li 
GSM897081_7	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
765 8c368a17 Daofeng Li 
GSM945186_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
766 8c368a17 Daofeng Li 
GSM840137_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
767 8c368a17 Daofeng Li 
GSM945298_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
768 8c368a17 Daofeng Li 
GSM923430_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq
769 8c368a17 Daofeng Li 
GSM945248_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
770 8c368a17 Daofeng Li 
GSM935496_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
771 8c368a17 Daofeng Li 
GSM935504_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
772 8c368a17 Daofeng Li 
GSM945249_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
773 8c368a17 Daofeng Li 
GSM935391_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
774 8c368a17 Daofeng Li 
GSM803415_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
775 8c368a17 Daofeng Li 
GSM935333_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
776 8c368a17 Daofeng Li 
GSM803411_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
777 8c368a17 Daofeng Li 
GSM935536_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
778 8c368a17 Daofeng Li 
GSM935377_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
779 8c368a17 Daofeng Li 
GSM935433_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
780 8c368a17 Daofeng Li 
GSM758573_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
781 8c368a17 Daofeng Li 
GSM733708_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
782 8c368a17 Daofeng Li 
GSM849330_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
783 8c368a17 Daofeng Li 
GSM803451_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
784 8c368a17 Daofeng Li 
GSM733774_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
785 8c368a17 Daofeng Li 
GSM803397_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
786 8c368a17 Daofeng Li 
GSM864360_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
787 8c368a17 Daofeng Li 
GSM849345_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
788 8c368a17 Daofeng Li 
GSM803536_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
789 8c368a17 Daofeng Li 
GSM816660_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
790 8c368a17 Daofeng Li 
GSM973683_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
791 8c368a17 Daofeng Li 
GSM923440_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
792 8c368a17 Daofeng Li 
GSM749687_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
793 8c368a17 Daofeng Li 
GSM822301_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
794 8c368a17 Daofeng Li 
GSM608162_1	Alignment=Sequence reads were obtained and mapped to the human genome assembly hg18 (March, 2006) or hg19 (February, 2009) using the Illumina Genome Analyzer Pipeline. All reads mapping with two or fewer mismatches were retained and read starts were summed in sliding windows of 400 bp to create summary windows.; Peak Calling=Peaks were called with Sole-Search (http://chipseq.genomecenter.ucdavis.edu/cgi-bin/chipseq.cgi)
795 8c368a17 Daofeng Li 
GSM935592_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
796 8c368a17 Daofeng Li 
GSM849338_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
797 8c368a17 Daofeng Li 
GSM945203_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
798 8c368a17 Daofeng Li 
GSM733785_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
799 8c368a17 Daofeng Li 
GSM849324_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
800 8c368a17 Daofeng Li 
GSM767840_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
801 8c368a17 Daofeng Li 
GSM935368_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
802 8c368a17 Daofeng Li 
GSM822293_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
803 8c368a17 Daofeng Li 
GSM973677_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
804 8c368a17 Daofeng Li 
GSM849350_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
805 8c368a17 Daofeng Li 
GSM830524_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
806 8c368a17 Daofeng Li 
GSM935622_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
807 8c368a17 Daofeng Li 
GSM935455_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
808 8c368a17 Daofeng Li 
GSM733679_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
809 8c368a17 Daofeng Li 
GSM944520_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSunyRipSeq
810 8c368a17 Daofeng Li 
GSM935601_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
811 8c368a17 Daofeng Li 
GSM733737_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
812 8c368a17 Daofeng Li 
GSM803413_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
813 8c368a17 Daofeng Li 
GSM830532_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
814 8c368a17 Daofeng Li 
GSM831004_1	Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters.  Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)).  Reads were extended to 200 bp using the -e parameter, otherwise defaults were used.  The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp.
815 8c368a17 Daofeng Li 
GSM736494_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
816 8c368a17 Daofeng Li 
GSM849027_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
817 8c368a17 Daofeng Li 
GSM803390_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
818 8c368a17 Daofeng Li 
GSM803429_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
819 8c368a17 Daofeng Li 
GSM816647_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
820 8c368a17 Daofeng Li 
GSM935280_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
821 8c368a17 Daofeng Li 
GSM945262_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
822 8c368a17 Daofeng Li 
GSM765396_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
823 8c368a17 Daofeng Li 
GSM935390_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
824 8c368a17 Daofeng Li 
GSM923447_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
825 8c368a17 Daofeng Li 
GSM945302_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
826 8c368a17 Daofeng Li 
GSM935589_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
827 8c368a17 Daofeng Li 
GSM935475_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
828 8c368a17 Daofeng Li 
GSM816639_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
829 8c368a17 Daofeng Li 
GSM733685_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
830 8c368a17 Daofeng Li 
GSM736530_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
831 8c368a17 Daofeng Li 
GSM803533_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
832 8c368a17 Daofeng Li 
GSM830986_1	Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters.  Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)).  Reads were extended to 200 bp using the -e parameter, otherwise defaults were used.  The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp.
833 8c368a17 Daofeng Li 
GSM767855_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
834 8c368a17 Daofeng Li 
GSM736621_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
835 8c368a17 Daofeng Li 
GSM935642_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
836 8c368a17 Daofeng Li 
GSM864338_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
837 8c368a17 Daofeng Li 
GSM935553_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
838 8c368a17 Daofeng Li 
GSM816656_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
839 8c368a17 Daofeng Li 
GSM849360_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
840 8c368a17 Daofeng Li 
GSM803532_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
841 8c368a17 Daofeng Li 
GSM803538_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
842 8c368a17 Daofeng Li 
GSM935499_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
843 8c368a17 Daofeng Li 
GSM605627_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
844 8c368a17 Daofeng Li 
GSM849340_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
845 8c368a17 Daofeng Li 
GSM672835_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaSeq
846 8c368a17 Daofeng Li 
GSM733686_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
847 8c368a17 Daofeng Li 
GSM816671_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
848 8c368a17 Daofeng Li 
GSM849304_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
849 8c368a17 Daofeng Li 
GSM935426_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
850 8c368a17 Daofeng Li 
GSM767845_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
851 8c368a17 Daofeng Li 
GSM733668_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
852 8c368a17 Daofeng Li 
GSM816669_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
853 8c368a17 Daofeng Li 
GSM733715_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
854 8c368a17 Daofeng Li 
GSM977045_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
855 8c368a17 Daofeng Li 
GSM605629_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
856 8c368a17 Daofeng Li 
GSM935339_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
857 8c368a17 Daofeng Li 
GSM803491_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
858 8c368a17 Daofeng Li 
GSM923442_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
859 8c368a17 Daofeng Li 
GSM830537_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
860 8c368a17 Daofeng Li 
GSM816661_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
861 8c368a17 Daofeng Li 
GSM931361_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
862 8c368a17 Daofeng Li 
GSM803381_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
863 8c368a17 Daofeng Li 
GSM935641_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
864 8c368a17 Daofeng Li 
GSM935404_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
865 8c368a17 Daofeng Li 
GSM803360_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
866 8c368a17 Daofeng Li 
GSM733732_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
867 8c368a17 Daofeng Li 
GSM803408_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
868 8c368a17 Daofeng Li 
GSM803482_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
869 8c368a17 Daofeng Li 
GSM822314_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
870 8c368a17 Daofeng Li 
GSM945214_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
871 8c368a17 Daofeng Li 
GSM816655_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
872 8c368a17 Daofeng Li 
GSM897082_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
873 8c368a17 Daofeng Li 
GSM758560_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
874 8c368a17 Daofeng Li 
GSM849337_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
875 8c368a17 Daofeng Li 
GSM736558_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
876 8c368a17 Daofeng Li 
GSM849366_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
877 8c368a17 Daofeng Li 
GSM822267_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
878 8c368a17 Daofeng Li 
GSM831031_1	Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters.  Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)).  Reads were extended to 200 bp using the -e parameter, otherwise defaults were used.  The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp.
879 8c368a17 Daofeng Li 
GSM849362_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
880 8c368a17 Daofeng Li 
GSM816673_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
881 8c368a17 Daofeng Li 
GSM767846_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
882 8c368a17 Daofeng Li 
GSM646568_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
883 8c368a17 Daofeng Li 
GSM803352_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
884 8c368a17 Daofeng Li 
GSM831042_1	Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters.  Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)).  Reads were extended to 200 bp using the -e parameter, otherwise defaults were used.  The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp.
885 8c368a17 Daofeng Li 
GSM803409_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
886 8c368a17 Daofeng Li 
GSM831020_1	Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters.  Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)).  Reads were extended to 200 bp using the -e parameter, otherwise defaults were used.  The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp.
887 8c368a17 Daofeng Li 
GSM749777_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
888 8c368a17 Daofeng Li 
GSM803405_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
889 8c368a17 Daofeng Li 
GSM736492_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
890 8c368a17 Daofeng Li 
GSM646570_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
891 8c368a17 Daofeng Li 
GSM923439_8	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
892 8c368a17 Daofeng Li 
GSM935523_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
893 8c368a17 Daofeng Li 
GSM736628_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
894 8c368a17 Daofeng Li 
GSM803430_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
895 8c368a17 Daofeng Li 
GSM945278_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
896 8c368a17 Daofeng Li 
GSM973690_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
897 8c368a17 Daofeng Li 
GSM646564_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
898 8c368a17 Daofeng Li 
GSM733672_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
899 8c368a17 Daofeng Li 
GSM945288_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
900 8c368a17 Daofeng Li 
GSM923453_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
901 8c368a17 Daofeng Li 
GSM923444_6	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
902 8c368a17 Daofeng Li 
GSM749778_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
903 8c368a17 Daofeng Li 
GSM831005_1	Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters.  Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)).  Reads were extended to 200 bp using the -e parameter, otherwise defaults were used.  The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp.
904 8c368a17 Daofeng Li 
GSM923445_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
905 8c368a17 Daofeng Li 
GSM749679_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
906 8c368a17 Daofeng Li 
GSM736517_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
907 8c368a17 Daofeng Li 
GSM816662_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
908 8c368a17 Daofeng Li 
GSM945183_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
909 8c368a17 Daofeng Li 
GSM803539_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
910 8c368a17 Daofeng Li 
GSM945310_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
911 8c368a17 Daofeng Li 
GSM958738_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq
912 8c368a17 Daofeng Li 
GSM803485_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
913 8c368a17 Daofeng Li 
GSM803377_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
914 8c368a17 Daofeng Li 
GSM736602_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
915 8c368a17 Daofeng Li 
GSM803496_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
916 8c368a17 Daofeng Li 
GSM864340_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
917 8c368a17 Daofeng Li 
GSM765394_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
918 8c368a17 Daofeng Li 
GSM935332_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
919 8c368a17 Daofeng Li 
GSM923447_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
920 8c368a17 Daofeng Li 
GSM803363_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
921 8c368a17 Daofeng Li 
GSM945239_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
922 8c368a17 Daofeng Li 
GSM897083_5	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
923 8c368a17 Daofeng Li 
GSM830531_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
924 8c368a17 Daofeng Li 
GSM803519_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
925 8c368a17 Daofeng Li 
GSM788073_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhHistone
926 8c368a17 Daofeng Li 
GSM935314_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
927 8c368a17 Daofeng Li 
GSM973672_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
928 8c368a17 Daofeng Li 
GSM830530_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
929 8c368a17 Daofeng Li 
GSM733687_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
930 8c368a17 Daofeng Li 
GSM822277_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
931 8c368a17 Daofeng Li 
GSM605630_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
932 8c368a17 Daofeng Li 
GSM803363_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
933 8c368a17 Daofeng Li 
GSM935283_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
934 8c368a17 Daofeng Li 
GSM935419_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
935 8c368a17 Daofeng Li 
GSM803367_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
936 8c368a17 Daofeng Li 
GSM935323_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
937 8c368a17 Daofeng Li 
GSM935378_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
938 8c368a17 Daofeng Li 
GSM830537_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
939 8c368a17 Daofeng Li 
GSM733781_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
940 8c368a17 Daofeng Li 
GSM864342_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
941 8c368a17 Daofeng Li 
GSM945239_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
942 8c368a17 Daofeng Li 
GSM803373_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
943 8c368a17 Daofeng Li 
GSM973678_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
944 8c368a17 Daofeng Li 
GSM765386_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
945 8c368a17 Daofeng Li 
GSM803528_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
946 8c368a17 Daofeng Li 
GSM803388_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
947 8c368a17 Daofeng Li 
GSM945172_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
948 8c368a17 Daofeng Li 
GSM923444_15	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
949 8c368a17 Daofeng Li 
GSM977043_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
950 8c368a17 Daofeng Li 
GSM767845_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
951 8c368a17 Daofeng Li 
GSM935349_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
952 8c368a17 Daofeng Li 
GSM767842_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
953 8c368a17 Daofeng Li 
GSM605625_5	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
954 8c368a17 Daofeng Li 
GSM822277_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
955 8c368a17 Daofeng Li 
GSM788080_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhHistone
956 8c368a17 Daofeng Li 
GSM935538_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
957 8c368a17 Daofeng Li 
GSM788086_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhHistone
958 8c368a17 Daofeng Li 
GSM831028_1	Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters.  Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)).  Reads were extended to 200 bp using the -e parameter, otherwise defaults were used.  The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp.
959 8c368a17 Daofeng Li 
GSM733741_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
960 8c368a17 Daofeng Li 
GSM935514_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
961 8c368a17 Daofeng Li 
GSM736502_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
962 8c368a17 Daofeng Li 
GSM672836_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaSeq
963 8c368a17 Daofeng Li 
GSM736631_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
964 8c368a17 Daofeng Li 
GSM767854_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
965 8c368a17 Daofeng Li 
GSM831038_1	Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters.  Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)).  Reads were extended to 200 bp using the -e parameter, otherwise defaults were used.  The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp.
966 8c368a17 Daofeng Li 
GSM935566_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
967 8c368a17 Daofeng Li 
GSM935623_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
968 8c368a17 Daofeng Li 
GSM803425_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
969 8c368a17 Daofeng Li 
GSM605628_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
970 8c368a17 Daofeng Li 
GSM749722_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
971 8c368a17 Daofeng Li 
GSM831007_1	Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters.  Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)).  Reads were extended to 200 bp using the -e parameter, otherwise defaults were used.  The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp.
972 8c368a17 Daofeng Li 
GSM803465_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
973 8c368a17 Daofeng Li 
GSM758575_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
974 8c368a17 Daofeng Li 
GSM897081_6	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
975 8c368a17 Daofeng Li 
GSM803422_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
976 8c368a17 Daofeng Li 
GSM803483_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
977 8c368a17 Daofeng Li 
GSM767856_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
978 8c368a17 Daofeng Li 
GSM733716_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
979 8c368a17 Daofeng Li 
GSM803508_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
980 8c368a17 Daofeng Li 
GSM822276_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
981 8c368a17 Daofeng Li 
GSM816647_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
982 8c368a17 Daofeng Li 
GSM816651_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
983 8c368a17 Daofeng Li 
GSM816642_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
984 8c368a17 Daofeng Li 
GSM749754_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
985 8c368a17 Daofeng Li 
GSM803473_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
986 8c368a17 Daofeng Li 
GSM945222_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
987 8c368a17 Daofeng Li 
GSM945245_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
988 8c368a17 Daofeng Li 
GSM803463_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
989 8c368a17 Daofeng Li 
GSM864353_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
990 8c368a17 Daofeng Li 
GSM803503_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
991 8c368a17 Daofeng Li 
GSM935383_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
992 8c368a17 Daofeng Li 
GSM803407_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
993 8c368a17 Daofeng Li 
GSM958731_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq
994 8c368a17 Daofeng Li 
GSM736547_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
995 8c368a17 Daofeng Li 
GSM803414_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
996 8c368a17 Daofeng Li 
GSM822286_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
997 8c368a17 Daofeng Li 
GSM803441_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
998 8c368a17 Daofeng Li 
GSM605629_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
999 8c368a17 Daofeng Li 
GSM733783_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
1000 8c368a17 Daofeng Li 
GSM803341_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1001 8c368a17 Daofeng Li 
GSM733776_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
1002 8c368a17 Daofeng Li 
GSM935367_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1003 8c368a17 Daofeng Li 
GSM945163_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1004 8c368a17 Daofeng Li 
GSM977036_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1005 8c368a17 Daofeng Li 
GSM749699_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
1006 8c368a17 Daofeng Li 
GSM736582_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
1007 8c368a17 Daofeng Li 
GSM958745_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq
1008 8c368a17 Daofeng Li 
GSM736536_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
1009 8c368a17 Daofeng Li 
GSM803439_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1010 8c368a17 Daofeng Li 
GSM945278_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1011 8c368a17 Daofeng Li 
GSM830529_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
1012 8c368a17 Daofeng Li 
GSM605632_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1013 8c368a17 Daofeng Li 
GSM646560_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
1014 8c368a17 Daofeng Li 
GSM803511_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1015 8c368a17 Daofeng Li 
GSM758571_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1016 8c368a17 Daofeng Li 
GSM923451_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
1017 8c368a17 Daofeng Li 
GSM958732_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq
1018 8c368a17 Daofeng Li 
GSM958741_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq
1019 8c368a17 Daofeng Li 
GSM816656_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
1020 8c368a17 Daofeng Li 
GSM736538_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
1021 8c368a17 Daofeng Li 
GSM818828_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhHistone
1022 8c368a17 Daofeng Li 
GSM758560_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1023 8c368a17 Daofeng Li 
GSM736528_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
1024 8c368a17 Daofeng Li 
GSM803459_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1025 8c368a17 Daofeng Li 
GSM736568_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
1026 8c368a17 Daofeng Li 
GSM733771_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
1027 8c368a17 Daofeng Li 
GSM803348_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1028 8c368a17 Daofeng Li 
GSM935447_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1029 8c368a17 Daofeng Li 
GSM935369_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1030 8c368a17 Daofeng Li 
GSM733673_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
1031 8c368a17 Daofeng Li 
GSM944519_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSunyRipSeq
1032 8c368a17 Daofeng Li 
GSM973666_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1033 8c368a17 Daofeng Li 
GSM977032_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1034 8c368a17 Daofeng Li 
GSM749745_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
1035 8c368a17 Daofeng Li 
GSM849364_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
1036 8c368a17 Daofeng Li 
GSM977029_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1037 8c368a17 Daofeng Li 
GSM849362_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
1038 8c368a17 Daofeng Li 
GSM945236_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1039 8c368a17 Daofeng Li 
GSM736563_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
1040 8c368a17 Daofeng Li 
GSM736519_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
1041 8c368a17 Daofeng Li 
GSM831010_1	Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters.  Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)).  Reads were extended to 200 bp using the -e parameter, otherwise defaults were used.  The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp.
1042 8c368a17 Daofeng Li 
GSM945260_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1043 8c368a17 Daofeng Li 
GSM816645_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
1044 8c368a17 Daofeng Li 
GSM923450_7	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
1045 8c368a17 Daofeng Li 
GSM646565_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
1046 8c368a17 Daofeng Li 
GSM935480_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1047 8c368a17 Daofeng Li 
GSM897081_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1048 8c368a17 Daofeng Li 
GSM935449_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1049 8c368a17 Daofeng Li 
GSM935486_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1050 8c368a17 Daofeng Li 
GSM830995_1	Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters.  Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)).  Reads were extended to 200 bp using the -e parameter, otherwise defaults were used.  The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp.
1051 8c368a17 Daofeng Li 
GSM973692_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1052 8c368a17 Daofeng Li 
GSM749671_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
1053 8c368a17 Daofeng Li 
GSM803530_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1054 8c368a17 Daofeng Li 
GSM945180_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1055 8c368a17 Daofeng Li 
GSM767840_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1056 8c368a17 Daofeng Li 
GSM803380_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1057 8c368a17 Daofeng Li 
GSM803464_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1058 8c368a17 Daofeng Li 
GSM923442_8	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
1059 8c368a17 Daofeng Li 
GSM767848_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1060 8c368a17 Daofeng Li 
GSM749734_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
1061 8c368a17 Daofeng Li 
GSM816658_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
1062 8c368a17 Daofeng Li 
GSM767841_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1063 8c368a17 Daofeng Li 
GSM935388_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1064 8c368a17 Daofeng Li 
GSM849324_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
1065 8c368a17 Daofeng Li 
GSM803336_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1066 8c368a17 Daofeng Li 
GSM803407_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1067 8c368a17 Daofeng Li 
GSM736616_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
1068 8c368a17 Daofeng Li 
GSM803481_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1069 8c368a17 Daofeng Li 
GSM849339_6	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
1070 8c368a17 Daofeng Li 
GSM758559_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1071 8c368a17 Daofeng Li 
GSM803462_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1072 8c368a17 Daofeng Li 
GSM977033_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1073 8c368a17 Daofeng Li 
GSM945224_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1074 8c368a17 Daofeng Li 
GSM803418_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1075 8c368a17 Daofeng Li 
GSM803350_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1076 8c368a17 Daofeng Li 
GSM945325_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1077 8c368a17 Daofeng Li 
GSM935374_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1078 8c368a17 Daofeng Li 
GSM749680_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
1079 8c368a17 Daofeng Li 
GSM973669_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1080 8c368a17 Daofeng Li 
GSM923447_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
1081 8c368a17 Daofeng Li 
GSM736600_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
1082 8c368a17 Daofeng Li 
GSM977033_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1083 8c368a17 Daofeng Li 
GSM767844_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1084 8c368a17 Daofeng Li 
GSM935561_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1085 8c368a17 Daofeng Li 
GSM977049_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1086 8c368a17 Daofeng Li 
GSM733773_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
1087 8c368a17 Daofeng Li 
GSM945194_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1088 8c368a17 Daofeng Li 
GSM733724_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
1089 8c368a17 Daofeng Li 
GSM803389_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1090 8c368a17 Daofeng Li 
GSM958730_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq
1091 8c368a17 Daofeng Li 
GSM736525_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
1092 8c368a17 Daofeng Li 
GSM765393_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1093 8c368a17 Daofeng Li 
GSM935272_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1094 8c368a17 Daofeng Li 
GSM849360_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
1095 8c368a17 Daofeng Li 
GSM977038_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1096 8c368a17 Daofeng Li 
GSM977046_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1097 8c368a17 Daofeng Li 
GSM831037_1	Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters.  Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)).  Reads were extended to 200 bp using the -e parameter, otherwise defaults were used.  The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp.
1098 8c368a17 Daofeng Li 
GSM816635_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
1099 8c368a17 Daofeng Li 
GSM605632_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1100 8c368a17 Daofeng Li 
GSM923448_6	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
1101 8c368a17 Daofeng Li 
GSM822291_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
1102 8c368a17 Daofeng Li 
GSM945283_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1103 8c368a17 Daofeng Li 
GSM897075_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1104 8c368a17 Daofeng Li 
GSM822310_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
1105 8c368a17 Daofeng Li 
GSM736601_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
1106 8c368a17 Daofeng Li 
GSM849354_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
1107 8c368a17 Daofeng Li 
GSM733714_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
1108 8c368a17 Daofeng Li 
GSM736575_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
1109 8c368a17 Daofeng Li 
GSM897083_6	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1110 8c368a17 Daofeng Li 
GSM749737_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
1111 8c368a17 Daofeng Li 
GSM777639_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUchicagoTfbs
1112 8c368a17 Daofeng Li 
GSM767853_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1113 8c368a17 Daofeng Li 
GSM736583_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
1114 8c368a17 Daofeng Li 
GSM733682_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
1115 8c368a17 Daofeng Li 
GSM945232_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1116 8c368a17 Daofeng Li 
GSM733647_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
1117 8c368a17 Daofeng Li 
GSM816643_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
1118 8c368a17 Daofeng Li 
GSM803512_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1119 8c368a17 Daofeng Li 
GSM822279_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
1120 8c368a17 Daofeng Li 
GSM733761_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
1121 8c368a17 Daofeng Li 
GSM945282_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1122 8c368a17 Daofeng Li 
GSM758572_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1123 8c368a17 Daofeng Li 
GSM849028_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
1124 8c368a17 Daofeng Li 
GSM897073_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1125 8c368a17 Daofeng Li 
GSM822273_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
1126 8c368a17 Daofeng Li 
GSM935618_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1127 8c368a17 Daofeng Li 
GSM849341_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
1128 8c368a17 Daofeng Li 
GSM897072_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1129 8c368a17 Daofeng Li 
GSM803479_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1130 8c368a17 Daofeng Li 
GSM736524_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
1131 8c368a17 Daofeng Li 
GSM803516_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1132 8c368a17 Daofeng Li 
GSM831030_1	Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters.  Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)).  Reads were extended to 200 bp using the -e parameter, otherwise defaults were used.  The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp.
1133 8c368a17 Daofeng Li 
GSM958730_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq
1134 8c368a17 Daofeng Li 
GSM945854_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhHistone
1135 8c368a17 Daofeng Li 
GSM977035_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1136 8c368a17 Daofeng Li 
GSM923442_5	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
1137 8c368a17 Daofeng Li 
GSM849334_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
1138 8c368a17 Daofeng Li 
GSM803536_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1139 8c368a17 Daofeng Li 
GSM749755_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
1140 8c368a17 Daofeng Li 
GSM758561_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1141 8c368a17 Daofeng Li 
GSM945216_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1142 8c368a17 Daofeng Li 
GSM977032_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1143 8c368a17 Daofeng Li 
GSM788071_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhHistone
1144 8c368a17 Daofeng Li 
GSM849351_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
1145 8c368a17 Daofeng Li 
GSM758574_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1146 8c368a17 Daofeng Li 
GSM803449_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1147 8c368a17 Daofeng Li 
GSM767847_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1148 8c368a17 Daofeng Li 
GSM767857_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1149 8c368a17 Daofeng Li 
GSM733659_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
1150 8c368a17 Daofeng Li 
GSM758567_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1151 8c368a17 Daofeng Li 
GSM816626_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
1152 8c368a17 Daofeng Li 
GSM958737_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq
1153 8c368a17 Daofeng Li 
GSM945196_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1154 8c368a17 Daofeng Li 
GSM749753_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
1155 8c368a17 Daofeng Li 
GSM897078_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1156 8c368a17 Daofeng Li 
GSM958728_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq
1157 8c368a17 Daofeng Li 
GSM945268_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1158 8c368a17 Daofeng Li 
GSM923445_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
1159 8c368a17 Daofeng Li 
GSM733694_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
1160 8c368a17 Daofeng Li 
GSM864344_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
1161 8c368a17 Daofeng Li 
GSM923453_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
1162 8c368a17 Daofeng Li 
GSM803513_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1163 8c368a17 Daofeng Li 
GSM733750_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
1164 8c368a17 Daofeng Li 
GSM767855_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1165 8c368a17 Daofeng Li 
GSM973669_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1166 8c368a17 Daofeng Li 
GSM945300_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1167 8c368a17 Daofeng Li 
GSM803505_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1168 8c368a17 Daofeng Li 
GSM736590_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
1169 8c368a17 Daofeng Li 
GSM973673_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1170 8c368a17 Daofeng Li 
GSM945204_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1171 8c368a17 Daofeng Li 
GSM788078_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhHistone
1172 8c368a17 Daofeng Li 
GSM765391_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1173 8c368a17 Daofeng Li 
GSM777638_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUchicagoTfbs
1174 8c368a17 Daofeng Li 
GSM923447_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
1175 8c368a17 Daofeng Li 
GSM923433_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq
1176 8c368a17 Daofeng Li 
GSM836272_1	Software=Bowtie, Cufflinks
1177 8c368a17 Daofeng Li 
GSM977047_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1178 8c368a17 Daofeng Li 
GSM822306_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
1179 8c368a17 Daofeng Li 
GSM958750_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq
1180 8c368a17 Daofeng Li 
GSM897078_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1181 8c368a17 Daofeng Li 
GSM977035_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1182 8c368a17 Daofeng Li 
GSM765395_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1183 8c368a17 Daofeng Li 
GSM803427_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1184 8c368a17 Daofeng Li 
GSM733759_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
1185 8c368a17 Daofeng Li 
GSM935421_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1186 8c368a17 Daofeng Li 
GSM973682_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1187 8c368a17 Daofeng Li 
GSM736612_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
1188 8c368a17 Daofeng Li 
GSM803402_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1189 8c368a17 Daofeng Li 
GSM765386_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1190 8c368a17 Daofeng Li 
GSM803484_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1191 8c368a17 Daofeng Li 
GSM849327_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
1192 8c368a17 Daofeng Li 
GSM803495_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1193 8c368a17 Daofeng Li 
GSM736511_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
1194 8c368a17 Daofeng Li 
GSM935630_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1195 8c368a17 Daofeng Li 
GSM945313_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1196 8c368a17 Daofeng Li 
GSM935273_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1197 8c368a17 Daofeng Li 
GSM749695_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
1198 8c368a17 Daofeng Li 
GSM935277_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1199 8c368a17 Daofeng Li 
GSM816632_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
1200 8c368a17 Daofeng Li 
GSM923451_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
1201 8c368a17 Daofeng Li 
GSM849025_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
1202 8c368a17 Daofeng Li 
GSM803403_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1203 8c368a17 Daofeng Li 
GSM849329_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
1204 8c368a17 Daofeng Li 
GSM944526_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSunyRipSeq
1205 8c368a17 Daofeng Li 
GSM765388_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1206 8c368a17 Daofeng Li 
GSM935331_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1207 8c368a17 Daofeng Li 
GSM973689_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1208 8c368a17 Daofeng Li 
GSM803520_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1209 8c368a17 Daofeng Li 
GSM977051_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1210 8c368a17 Daofeng Li 
GSM816628_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
1211 8c368a17 Daofeng Li 
GSM945266_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1212 8c368a17 Daofeng Li 
GSM935336_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1213 8c368a17 Daofeng Li 
GSM758577_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1214 8c368a17 Daofeng Li 
GSM803382_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1215 8c368a17 Daofeng Li 
GSM945211_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1216 8c368a17 Daofeng Li 
GSM765400_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1217 8c368a17 Daofeng Li 
GSM935522_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1218 8c368a17 Daofeng Li 
GSM935403_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1219 8c368a17 Daofeng Li 
GSM803351_5	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1220 8c368a17 Daofeng Li 
GSM803541_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1221 8c368a17 Daofeng Li 
GSM945169_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1222 8c368a17 Daofeng Li 
GSM935652_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1223 8c368a17 Daofeng Li 
GSM977036_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1224 8c368a17 Daofeng Li 
GSM849368_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
1225 8c368a17 Daofeng Li 
GSM749715_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
1226 8c368a17 Daofeng Li 
GSM803338_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1227 8c368a17 Daofeng Li 
GSM803338_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1228 8c368a17 Daofeng Li 
GSM849358_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
1229 8c368a17 Daofeng Li 
GSM935415_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1230 8c368a17 Daofeng Li 
GSM803498_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1231 8c368a17 Daofeng Li 
GSM945175_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1232 8c368a17 Daofeng Li 
GSM977036_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1233 8c368a17 Daofeng Li 
GSM803486_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1234 8c368a17 Daofeng Li 
GSM945213_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1235 8c368a17 Daofeng Li 
GSM849349_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
1236 8c368a17 Daofeng Li 
GSM935645_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1237 8c368a17 Daofeng Li 
GSM945284_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1238 8c368a17 Daofeng Li 
GSM864359_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
1239 8c368a17 Daofeng Li 
GSM897075_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1240 8c368a17 Daofeng Li 
GSM803337_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1241 8c368a17 Daofeng Li 
GSM935563_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1242 8c368a17 Daofeng Li 
GSM973674_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1243 8c368a17 Daofeng Li 
GSM849338_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
1244 8c368a17 Daofeng Li 
GSM973691_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1245 8c368a17 Daofeng Li 
GSM977034_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1246 8c368a17 Daofeng Li 
GSM973674_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1247 8c368a17 Daofeng Li 
GSM749772_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
1248 8c368a17 Daofeng Li 
GSM733711_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
1249 8c368a17 Daofeng Li 
GSM803405_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1250 8c368a17 Daofeng Li 
GSM935512_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1251 8c368a17 Daofeng Li 
GSM864345_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
1252 8c368a17 Daofeng Li 
GSM945240_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1253 8c368a17 Daofeng Li 
GSM816659_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
1254 8c368a17 Daofeng Li 
GSM765394_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1255 8c368a17 Daofeng Li 
GSM923442_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
1256 8c368a17 Daofeng Li 
GSM803501_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1257 8c368a17 Daofeng Li 
GSM935571_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1258 8c368a17 Daofeng Li 
GSM923444_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
1259 8c368a17 Daofeng Li 
GSM973680_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1260 8c368a17 Daofeng Li 
GSM733768_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
1261 8c368a17 Daofeng Li 
GSM830521_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
1262 8c368a17 Daofeng Li 
GSM897086_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1263 8c368a17 Daofeng Li 
GSM849324_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
1264 8c368a17 Daofeng Li 
GSM849336_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
1265 8c368a17 Daofeng Li 
GSM958728_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq
1266 8c368a17 Daofeng Li 
GSM605625_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1267 8c368a17 Daofeng Li 
GSM733651_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
1268 8c368a17 Daofeng Li 
GSM945316_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1269 8c368a17 Daofeng Li 
GSM945267_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1270 8c368a17 Daofeng Li 
GSM945174_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1271 8c368a17 Daofeng Li 
GSM803358_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1272 8c368a17 Daofeng Li 
GSM849354_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
1273 8c368a17 Daofeng Li 
GSM945276_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1274 8c368a17 Daofeng Li 
GSM765404_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1275 8c368a17 Daofeng Li 
GSM758564_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1276 8c368a17 Daofeng Li 
GSM923441_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
1277 8c368a17 Daofeng Li 
GSM803542_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1278 8c368a17 Daofeng Li 
GSM803370_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1279 8c368a17 Daofeng Li 
GSM822270_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
1280 8c368a17 Daofeng Li 
GSM945271_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1281 8c368a17 Daofeng Li 
GSM736571_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
1282 8c368a17 Daofeng Li 
GSM803515_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1283 8c368a17 Daofeng Li 
GSM945247_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1284 8c368a17 Daofeng Li 
GSM803504_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1285 8c368a17 Daofeng Li 
GSM897072_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1286 8c368a17 Daofeng Li 
GSM749685_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
1287 8c368a17 Daofeng Li 
GSM977037_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1288 8c368a17 Daofeng Li 
GSM831014_1	Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters.  Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)).  Reads were extended to 200 bp using the -e parameter, otherwise defaults were used.  The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp.
1289 8c368a17 Daofeng Li 
GSM973677_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1290 8c368a17 Daofeng Li 
GSM749736_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
1291 8c368a17 Daofeng Li 
GSM944521_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSunyRipSeq
1292 8c368a17 Daofeng Li 
GSM767842_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1293 8c368a17 Daofeng Li 
GSM849358_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
1294 8c368a17 Daofeng Li 
GSM945198_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1295 8c368a17 Daofeng Li 
GSM767853_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1296 8c368a17 Daofeng Li 
GSM945312_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1297 8c368a17 Daofeng Li 
GSM945271_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1298 8c368a17 Daofeng Li 
GSM803398_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1299 8c368a17 Daofeng Li 
GSM977028_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1300 8c368a17 Daofeng Li 
GSM958748_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq
1301 8c368a17 Daofeng Li 
GSM605633_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1302 8c368a17 Daofeng Li 
GSM935632_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1303 8c368a17 Daofeng Li 
GSM758568_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1304 8c368a17 Daofeng Li 
GSM864344_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
1305 8c368a17 Daofeng Li 
GSM803437_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1306 8c368a17 Daofeng Li 
GSM803399_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1307 8c368a17 Daofeng Li 
GSM945193_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1308 8c368a17 Daofeng Li 
GSM803530_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1309 8c368a17 Daofeng Li 
GSM803384_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1310 8c368a17 Daofeng Li 
GSM923418_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq
1311 8c368a17 Daofeng Li 
GSM758577_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1312 8c368a17 Daofeng Li 
GSM803458_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1313 8c368a17 Daofeng Li 
GSM803531_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1314 8c368a17 Daofeng Li 
GSM973668_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1315 8c368a17 Daofeng Li 
GSM765402_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1316 8c368a17 Daofeng Li 
GSM973684_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1317 8c368a17 Daofeng Li 
GSM935584_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1318 8c368a17 Daofeng Li 
GSM945296_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1319 8c368a17 Daofeng Li 
GSM935488_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1320 8c368a17 Daofeng Li 
GSM803527_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1321 8c368a17 Daofeng Li 
GSM733735_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
1322 8c368a17 Daofeng Li 
GSM736531_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
1323 8c368a17 Daofeng Li 
GSM935548_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1324 8c368a17 Daofeng Li 
GSM849366_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
1325 8c368a17 Daofeng Li 
GSM803334_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1326 8c368a17 Daofeng Li 
GSM736549_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
1327 8c368a17 Daofeng Li 
GSM803353_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1328 8c368a17 Daofeng Li 
GSM831043_1	Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters.  Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)).  Reads were extended to 200 bp using the -e parameter, otherwise defaults were used.  The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp.
1329 8c368a17 Daofeng Li 
GSM973675_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1330 8c368a17 Daofeng Li 
GSM923446_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
1331 8c368a17 Daofeng Li 
GSM945204_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1332 8c368a17 Daofeng Li 
GSM831003_1	Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters.  Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)).  Reads were extended to 200 bp using the -e parameter, otherwise defaults were used.  The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp.
1333 8c368a17 Daofeng Li 
GSM935373_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1334 8c368a17 Daofeng Li 
GSM758566_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1335 8c368a17 Daofeng Li 
GSM935320_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1336 8c368a17 Daofeng Li 
GSM758578_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1337 8c368a17 Daofeng Li 
GSM935586_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1338 8c368a17 Daofeng Li 
GSM935628_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1339 8c368a17 Daofeng Li 
GSM935587_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1340 8c368a17 Daofeng Li 
GSM733644_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
1341 8c368a17 Daofeng Li 
GSM818827_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhHistone
1342 8c368a17 Daofeng Li 
GSM935451_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1343 8c368a17 Daofeng Li 
GSM803451_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1344 8c368a17 Daofeng Li 
GSM973689_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1345 8c368a17 Daofeng Li 
GSM803386_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1346 8c368a17 Daofeng Li 
GSM803388_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1347 8c368a17 Daofeng Li 
GSM830521_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
1348 8c368a17 Daofeng Li 
GSM803506_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1349 8c368a17 Daofeng Li 
GSM736516_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
1350 8c368a17 Daofeng Li 
GSM767853_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1351 8c368a17 Daofeng Li 
GSM733688_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
1352 8c368a17 Daofeng Li 
GSM945182_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1353 8c368a17 Daofeng Li 
GSM816646_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
1354 8c368a17 Daofeng Li 
GSM749726_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
1355 8c368a17 Daofeng Li 
GSM935550_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1356 8c368a17 Daofeng Li 
GSM733676_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
1357 8c368a17 Daofeng Li 
GSM765391_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1358 8c368a17 Daofeng Li 
GSM973669_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1359 8c368a17 Daofeng Li 
GSM736608_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
1360 8c368a17 Daofeng Li 
GSM788084_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhHistone
1361 8c368a17 Daofeng Li 
GSM733755_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
1362 8c368a17 Daofeng Li 
GSM822271_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
1363 8c368a17 Daofeng Li 
GSM935446_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1364 8c368a17 Daofeng Li 
GSM736537_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
1365 8c368a17 Daofeng Li 
GSM958735_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq
1366 8c368a17 Daofeng Li 
GSM803349_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1367 8c368a17 Daofeng Li 
GSM736554_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
1368 8c368a17 Daofeng Li 
GSM830535_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
1369 8c368a17 Daofeng Li 
GSM923443_8	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
1370 8c368a17 Daofeng Li 
GSM836273_1	Software=Bowtie, Cufflinks
1371 8c368a17 Daofeng Li 
GSM803443_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1372 8c368a17 Daofeng Li 
GSM977052_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1373 8c368a17 Daofeng Li 
GSM935464_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1374 8c368a17 Daofeng Li 
GSM767850_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1375 8c368a17 Daofeng Li 
GSM749669_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
1376 8c368a17 Daofeng Li 
GSM803470_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1377 8c368a17 Daofeng Li 
GSM958751_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq
1378 8c368a17 Daofeng Li 
GSM836270_1	Software=Bowtie, Cufflinks
1379 8c368a17 Daofeng Li 
GSM945159_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1380 8c368a17 Daofeng Li 
GSM803514_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1381 8c368a17 Daofeng Li 
GSM736542_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
1382 8c368a17 Daofeng Li 
GSM935359_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1383 8c368a17 Daofeng Li 
GSM605633_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1384 8c368a17 Daofeng Li 
GSM758572_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1385 8c368a17 Daofeng Li 
GSM736535_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
1386 8c368a17 Daofeng Li 
GSM816671_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
1387 8c368a17 Daofeng Li 
GSM803521_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1388 8c368a17 Daofeng Li 
GSM803335_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1389 8c368a17 Daofeng Li 
GSM923435_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq
1390 8c368a17 Daofeng Li 
GSM736569_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
1391 8c368a17 Daofeng Li 
GSM977040_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1392 8c368a17 Daofeng Li 
GSM803440_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1393 8c368a17 Daofeng Li 
GSM923449_5	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
1394 8c368a17 Daofeng Li 
GSM945272_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1395 8c368a17 Daofeng Li 
GSM923452_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
1396 8c368a17 Daofeng Li 
GSM733772_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
1397 8c368a17 Daofeng Li 
GSM897082_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1398 8c368a17 Daofeng Li 
GSM977029_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1399 8c368a17 Daofeng Li 
GSM733728_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
1400 8c368a17 Daofeng Li 
GSM935322_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1401 8c368a17 Daofeng Li 
GSM816642_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
1402 8c368a17 Daofeng Li 
GSM803345_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1403 8c368a17 Daofeng Li 
GSM923437_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq
1404 8c368a17 Daofeng Li 
GSM849327_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
1405 8c368a17 Daofeng Li 
GSM822286_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
1406 8c368a17 Daofeng Li 
GSM945191_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1407 8c368a17 Daofeng Li 
GSM935579_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1408 8c368a17 Daofeng Li 
GSM945320_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1409 8c368a17 Daofeng Li 
GSM831022_1	Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters.  Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)).  Reads were extended to 200 bp using the -e parameter, otherwise defaults were used.  The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp.
1410 8c368a17 Daofeng Li 
GSM798322_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
1411 8c368a17 Daofeng Li 
GSM849346_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
1412 8c368a17 Daofeng Li 
GSM923451_7	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
1413 8c368a17 Daofeng Li 
GSM945322_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1414 8c368a17 Daofeng Li 
GSM973689_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1415 8c368a17 Daofeng Li 
GSM945857_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhHistone
1416 8c368a17 Daofeng Li 
GSM803535_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1417 8c368a17 Daofeng Li 
GSM765398_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1418 8c368a17 Daofeng Li 
GSM767854_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1419 8c368a17 Daofeng Li 
GSM831035_1	Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters.  Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)).  Reads were extended to 200 bp using the -e parameter, otherwise defaults were used.  The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp.
1420 8c368a17 Daofeng Li 
GSM736625_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
1421 8c368a17 Daofeng Li 
GSM973683_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1422 8c368a17 Daofeng Li 
GSM736620_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
1423 8c368a17 Daofeng Li 
GSM822313_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
1424 8c368a17 Daofeng Li 
GSM816640_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
1425 8c368a17 Daofeng Li 
GSM958734_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq
1426 8c368a17 Daofeng Li 
GSM849368_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
1427 8c368a17 Daofeng Li 
GSM977046_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1428 8c368a17 Daofeng Li 
GSM736550_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
1429 8c368a17 Daofeng Li 
GSM935505_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1430 8c368a17 Daofeng Li 
GSM749738_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
1431 8c368a17 Daofeng Li 
GSM803453_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1432 8c368a17 Daofeng Li 
GSM803351_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1433 8c368a17 Daofeng Li 
GSM765399_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1434 8c368a17 Daofeng Li 
GSM803374_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1435 8c368a17 Daofeng Li 
GSM816437_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1436 8c368a17 Daofeng Li 
GSM749763_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
1437 8c368a17 Daofeng Li 
GSM605635_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1438 8c368a17 Daofeng Li 
GSM973686_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1439 8c368a17 Daofeng Li 
GSM923452_6	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
1440 8c368a17 Daofeng Li 
GSM977044_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1441 8c368a17 Daofeng Li 
GSM973690_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1442 8c368a17 Daofeng Li 
GSM605632_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1443 8c368a17 Daofeng Li 
GSM733653_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
1444 8c368a17 Daofeng Li 
GSM816631_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
1445 8c368a17 Daofeng Li 
GSM935279_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1446 8c368a17 Daofeng Li 
GSM935649_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1447 8c368a17 Daofeng Li 
GSM977039_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1448 8c368a17 Daofeng Li 
GSM973684_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1449 8c368a17 Daofeng Li 
GSM758562_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1450 8c368a17 Daofeng Li 
GSM973673_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1451 8c368a17 Daofeng Li 
GSM897073_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1452 8c368a17 Daofeng Li 
GSM803419_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1453 8c368a17 Daofeng Li 
GSM897079_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1454 8c368a17 Daofeng Li 
GSM864338_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
1455 8c368a17 Daofeng Li 
GSM733767_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
1456 8c368a17 Daofeng Li 
GSM849339_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
1457 8c368a17 Daofeng Li 
GSM897075_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1458 8c368a17 Daofeng Li 
GSM803541_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1459 8c368a17 Daofeng Li 
GSM816665_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
1460 8c368a17 Daofeng Li 
GSM803379_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1461 8c368a17 Daofeng Li 
GSM749684_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
1462 8c368a17 Daofeng Li 
GSM803414_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1463 8c368a17 Daofeng Li 
GSM923447_6	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
1464 8c368a17 Daofeng Li 
GSM945212_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1465 8c368a17 Daofeng Li 
GSM749743_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
1466 8c368a17 Daofeng Li 
GSM765402_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1467 8c368a17 Daofeng Li 
GSM605625_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1468 8c368a17 Daofeng Li 
GSM935473_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1469 8c368a17 Daofeng Li 
GSM803529_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1470 8c368a17 Daofeng Li 
GSM831015_1	Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters.  Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)).  Reads were extended to 200 bp using the -e parameter, otherwise defaults were used.  The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp.
1471 8c368a17 Daofeng Li 
GSM646563_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
1472 8c368a17 Daofeng Li 
GSM849334_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
1473 8c368a17 Daofeng Li 
GSM945178_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1474 8c368a17 Daofeng Li 
GSM935470_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1475 8c368a17 Daofeng Li 
GSM803515_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1476 8c368a17 Daofeng Li 
GSM977030_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1477 8c368a17 Daofeng Li 
GSM803353_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1478 8c368a17 Daofeng Li 
GSM758561_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1479 8c368a17 Daofeng Li 
GSM897082_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1480 8c368a17 Daofeng Li 
GSM803369_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1481 8c368a17 Daofeng Li 
GSM803377_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1482 8c368a17 Daofeng Li 
GSM816627_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
1483 8c368a17 Daofeng Li 
GSM945279_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1484 8c368a17 Daofeng Li 
GSM803333_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1485 8c368a17 Daofeng Li 
GSM803500_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1486 8c368a17 Daofeng Li 
GSM803424_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1487 8c368a17 Daofeng Li 
GSM767843_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1488 8c368a17 Daofeng Li 
GSM945324_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1489 8c368a17 Daofeng Li 
GSM803350_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1490 8c368a17 Daofeng Li 
GSM945292_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1491 8c368a17 Daofeng Li 
GSM822289_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
1492 8c368a17 Daofeng Li 
GSM923425_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq
1493 8c368a17 Daofeng Li 
GSM803473_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1494 8c368a17 Daofeng Li 
GSM935307_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1495 8c368a17 Daofeng Li 
GSM849364_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
1496 8c368a17 Daofeng Li 
GSM935453_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1497 8c368a17 Daofeng Li 
GSM608167_1	Alignment=Sequence reads were obtained and mapped to the human genome assembly hg18 (March, 2006) or hg19 (February, 2009) using the Illumina Genome Analyzer Pipeline. All reads mapping with two or fewer mismatches were retained and read starts were summed in sliding windows of 400 bp to create summary windows.; Peak Calling=Peaks were called with Sole-Search (http://chipseq.genomecenter.ucdavis.edu/cgi-bin/chipseq.cgi)
1498 8c368a17 Daofeng Li 
GSM977034_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1499 8c368a17 Daofeng Li 
GSM749773_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
1500 8c368a17 Daofeng Li 
GSM646562_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
1501 8c368a17 Daofeng Li 
GSM803393_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1502 8c368a17 Daofeng Li 
GSM973687_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1503 8c368a17 Daofeng Li 
GSM605634_5	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1504 8c368a17 Daofeng Li 
GSM973673_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1505 8c368a17 Daofeng Li 
GSM945227_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1506 8c368a17 Daofeng Li 
GSM803444_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1507 8c368a17 Daofeng Li 
GSM923452_8	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
1508 8c368a17 Daofeng Li 
GSM733769_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
1509 8c368a17 Daofeng Li 
GSM749735_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
1510 8c368a17 Daofeng Li 
GSM758572_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1511 8c368a17 Daofeng Li 
GSM822291_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
1512 8c368a17 Daofeng Li 
GSM923444_11	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
1513 8c368a17 Daofeng Li 
GSM830536_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
1514 8c368a17 Daofeng Li 
GSM736606_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
1515 8c368a17 Daofeng Li 
GSM758559_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1516 8c368a17 Daofeng Li 
GSM945229_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1517 8c368a17 Daofeng Li 
GSM749742_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
1518 8c368a17 Daofeng Li 
GSM749678_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
1519 8c368a17 Daofeng Li 
GSM958737_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq
1520 8c368a17 Daofeng Li 
GSM945226_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1521 8c368a17 Daofeng Li 
GSM958745_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq
1522 8c368a17 Daofeng Li 
GSM733670_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
1523 8c368a17 Daofeng Li 
GSM923445_6	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
1524 8c368a17 Daofeng Li 
GSM945237_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1525 8c368a17 Daofeng Li 
GSM818744_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1526 8c368a17 Daofeng Li 
GSM803439_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1527 8c368a17 Daofeng Li 
GSM935442_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1528 8c368a17 Daofeng Li 
GSM733718_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
1529 8c368a17 Daofeng Li 
GSM864351_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
1530 8c368a17 Daofeng Li 
GSM973663_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1531 8c368a17 Daofeng Li 
GSM849330_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
1532 8c368a17 Daofeng Li 
GSM847562_1	Software=Bowtie, Cufflinks
1533 8c368a17 Daofeng Li 
GSM758563_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1534 8c368a17 Daofeng Li 
GSM935363_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1535 8c368a17 Daofeng Li 
GSM977038_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1536 8c368a17 Daofeng Li 
GSM840138_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1537 8c368a17 Daofeng Li 
GSM973667_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1538 8c368a17 Daofeng Li 
GSM935309_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1539 8c368a17 Daofeng Li 
GSM973674_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1540 8c368a17 Daofeng Li 
GSM803474_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1541 8c368a17 Daofeng Li 
GSM767843_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1542 8c368a17 Daofeng Li 
GSM830524_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
1543 8c368a17 Daofeng Li 
GSM803410_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1544 8c368a17 Daofeng Li 
GSM977047_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1545 8c368a17 Daofeng Li 
GSM767851_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1546 8c368a17 Daofeng Li 
GSM945296_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1547 8c368a17 Daofeng Li 
GSM973665_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1548 8c368a17 Daofeng Li 
GSM945265_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1549 8c368a17 Daofeng Li 
GSM822301_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
1550 8c368a17 Daofeng Li 
GSM767847_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1551 8c368a17 Daofeng Li 
GSM803523_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1552 8c368a17 Daofeng Li 
GSM935460_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1553 8c368a17 Daofeng Li 
GSM935483_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1554 8c368a17 Daofeng Li 
GSM958738_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq
1555 8c368a17 Daofeng Li 
GSM923431_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq
1556 8c368a17 Daofeng Li 
GSM935503_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1557 8c368a17 Daofeng Li 
GSM849331_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
1558 8c368a17 Daofeng Li 
GSM822309_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
1559 8c368a17 Daofeng Li 
GSM923440_7	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
1560 8c368a17 Daofeng Li 
GSM922955_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhRnaSeq
1561 8c368a17 Daofeng Li 
GSM749730_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
1562 8c368a17 Daofeng Li 
GSM945221_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1563 8c368a17 Daofeng Li 
GSM945175_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1564 8c368a17 Daofeng Li 
GSM958731_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq
1565 8c368a17 Daofeng Li 
GSM765405_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1566 8c368a17 Daofeng Li 
GSM958740_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq
1567 8c368a17 Daofeng Li 
GSM777640_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUchicagoTfbs
1568 8c368a17 Daofeng Li 
GSM733757_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
1569 8c368a17 Daofeng Li 
GSM765399_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1570 8c368a17 Daofeng Li 
GSM945277_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1571 8c368a17 Daofeng Li 
GSM767850_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1572 8c368a17 Daofeng Li 
GSM733720_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
1573 8c368a17 Daofeng Li 
GSM945244_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1574 8c368a17 Daofeng Li 
GSM935646_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1575 8c368a17 Daofeng Li 
GSM736565_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
1576 8c368a17 Daofeng Li 
GSM803527_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1577 8c368a17 Daofeng Li 
GSM803457_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1578 8c368a17 Daofeng Li 
GSM977051_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1579 8c368a17 Daofeng Li 
GSM822284_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
1580 8c368a17 Daofeng Li 
GSM803489_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1581 8c368a17 Daofeng Li 
GSM758575_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1582 8c368a17 Daofeng Li 
GSM736544_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
1583 8c368a17 Daofeng Li 
GSM803489_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1584 8c368a17 Daofeng Li 
GSM830534_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
1585 8c368a17 Daofeng Li 
GSM923429_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq
1586 8c368a17 Daofeng Li 
GSM849362_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
1587 8c368a17 Daofeng Li 
GSM935476_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1588 8c368a17 Daofeng Li 
GSM935599_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1589 8c368a17 Daofeng Li 
GSM935511_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1590 8c368a17 Daofeng Li 
GSM944519_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSunyRipSeq
1591 8c368a17 Daofeng Li 
GSM864346_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
1592 8c368a17 Daofeng Li 
GSM973693_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1593 8c368a17 Daofeng Li 
GSM973680_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1594 8c368a17 Daofeng Li 
GSM923441_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
1595 8c368a17 Daofeng Li 
GSM822298_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
1596 8c368a17 Daofeng Li 
GSM923444_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
1597 8c368a17 Daofeng Li 
GSM831002_1	Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters.  Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)).  Reads were extended to 200 bp using the -e parameter, otherwise defaults were used.  The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp.
1598 8c368a17 Daofeng Li 
GSM765401_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1599 8c368a17 Daofeng Li 
GSM765391_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1600 8c368a17 Daofeng Li 
GSM849330_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
1601 8c368a17 Daofeng Li 
GSM803395_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1602 8c368a17 Daofeng Li 
GSM803524_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1603 8c368a17 Daofeng Li 
GSM923432_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq
1604 8c368a17 Daofeng Li 
GSM767851_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1605 8c368a17 Daofeng Li 
GSM803373_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1606 8c368a17 Daofeng Li 
GSM816653_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
1607 8c368a17 Daofeng Li 
GSM749750_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
1608 8c368a17 Daofeng Li 
GSM958739_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq
1609 8c368a17 Daofeng Li 
GSM605629_5	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1610 8c368a17 Daofeng Li 
GSM765392_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1611 8c368a17 Daofeng Li 
GSM973688_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1612 8c368a17 Daofeng Li 
GSM973668_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1613 8c368a17 Daofeng Li 
GSM736610_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
1614 8c368a17 Daofeng Li 
GSM765403_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1615 8c368a17 Daofeng Li 
GSM788081_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhHistone
1616 8c368a17 Daofeng Li 
GSM767847_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1617 8c368a17 Daofeng Li 
GSM736493_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
1618 8c368a17 Daofeng Li 
GSM935605_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1619 8c368a17 Daofeng Li 
GSM945267_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1620 8c368a17 Daofeng Li 
GSM767854_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1621 8c368a17 Daofeng Li 
GSM758573_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1622 8c368a17 Daofeng Li 
GSM977035_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1623 8c368a17 Daofeng Li 
GSM977040_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1624 8c368a17 Daofeng Li 
GSM944523_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSunyRipSeq
1625 8c368a17 Daofeng Li 
GSM765386_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1626 8c368a17 Daofeng Li 
GSM935291_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1627 8c368a17 Daofeng Li 
GSM935358_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1628 8c368a17 Daofeng Li 
GSM897086_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1629 8c368a17 Daofeng Li 
GSM765389_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1630 8c368a17 Daofeng Li 
GSM822299_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
1631 8c368a17 Daofeng Li 
GSM803384_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1632 8c368a17 Daofeng Li 
GSM822273_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
1633 8c368a17 Daofeng Li 
GSM849339_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
1634 8c368a17 Daofeng Li 
GSM945251_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1635 8c368a17 Daofeng Li 
GSM733707_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
1636 8c368a17 Daofeng Li 
GSM803346_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1637 8c368a17 Daofeng Li 
GSM944524_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSunyRipSeq
1638 8c368a17 Daofeng Li 
GSM803525_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1639 8c368a17 Daofeng Li 
GSM849302_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
1640 8c368a17 Daofeng Li 
GSM945299_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1641 8c368a17 Daofeng Li 
GSM803340_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1642 8c368a17 Daofeng Li 
GSM803521_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1643 8c368a17 Daofeng Li 
GSM935292_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1644 8c368a17 Daofeng Li 
GSM935352_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1645 8c368a17 Daofeng Li 
GSM945269_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1646 8c368a17 Daofeng Li 
GSM803403_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1647 8c368a17 Daofeng Li 
GSM749764_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
1648 8c368a17 Daofeng Li 
GSM945188_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1649 8c368a17 Daofeng Li 
GSM831021_1	Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters.  Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)).  Reads were extended to 200 bp using the -e parameter, otherwise defaults were used.  The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp.
1650 8c368a17 Daofeng Li 
GSM945269_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1651 8c368a17 Daofeng Li 
GSM977030_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1652 8c368a17 Daofeng Li 
GSM945170_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1653 8c368a17 Daofeng Li 
GSM864361_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
1654 8c368a17 Daofeng Li 
GSM733770_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
1655 8c368a17 Daofeng Li 
GSM973678_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1656 8c368a17 Daofeng Li 
GSM923422_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq
1657 8c368a17 Daofeng Li 
GSM958739_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq
1658 8c368a17 Daofeng Li 
GSM736614_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
1659 8c368a17 Daofeng Li 
GSM973665_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1660 8c368a17 Daofeng Li 
GSM765394_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1661 8c368a17 Daofeng Li 
GSM935575_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1662 8c368a17 Daofeng Li 
GSM758576_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1663 8c368a17 Daofeng Li 
GSM736497_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
1664 8c368a17 Daofeng Li 
GSM923444_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
1665 8c368a17 Daofeng Li 
GSM944521_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSunyRipSeq
1666 8c368a17 Daofeng Li 
GSM849357_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
1667 8c368a17 Daofeng Li 
GSM803383_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1668 8c368a17 Daofeng Li 
GSM849305_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
1669 8c368a17 Daofeng Li 
GSM897083_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1670 8c368a17 Daofeng Li 
GSM945255_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1671 8c368a17 Daofeng Li 
GSM758570_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1672 8c368a17 Daofeng Li 
GSM736505_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
1673 8c368a17 Daofeng Li 
GSM849359_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
1674 8c368a17 Daofeng Li 
GSM849305_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
1675 8c368a17 Daofeng Li 
GSM945192_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1676 8c368a17 Daofeng Li 
GSM945291_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1677 8c368a17 Daofeng Li 
GSM765402_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1678 8c368a17 Daofeng Li 
GSM840136_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1679 8c368a17 Daofeng Li 
GSM822285_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
1680 8c368a17 Daofeng Li 
GSM923444_7	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
1681 8c368a17 Daofeng Li 
GSM849357_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
1682 8c368a17 Daofeng Li 
GSM864343_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
1683 8c368a17 Daofeng Li 
GSM788083_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhHistone
1684 8c368a17 Daofeng Li 
GSM816644_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
1685 8c368a17 Daofeng Li 
GSM758563_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1686 8c368a17 Daofeng Li 
GSM803512_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1687 8c368a17 Daofeng Li 
GSM935501_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1688 8c368a17 Daofeng Li 
GSM736553_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
1689 8c368a17 Daofeng Li 
GSM803538_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1690 8c368a17 Daofeng Li 
GSM736626_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
1691 8c368a17 Daofeng Li 
GSM897071_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1692 8c368a17 Daofeng Li 
GSM945270_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1693 8c368a17 Daofeng Li 
GSM733725_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
1694 8c368a17 Daofeng Li 
GSM765394_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1695 8c368a17 Daofeng Li 
GSM977034_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1696 8c368a17 Daofeng Li 
GSM736581_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
1697 8c368a17 Daofeng Li 
GSM736510_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
1698 8c368a17 Daofeng Li 
GSM935513_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1699 8c368a17 Daofeng Li 
GSM803466_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1700 8c368a17 Daofeng Li 
GSM849330_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
1701 8c368a17 Daofeng Li 
GSM803425_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1702 8c368a17 Daofeng Li 
GSM788079_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhHistone
1703 8c368a17 Daofeng Li 
GSM935610_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1704 8c368a17 Daofeng Li 
GSM849349_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
1705 8c368a17 Daofeng Li 
GSM803455_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1706 8c368a17 Daofeng Li 
GSM605633_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1707 8c368a17 Daofeng Li 
GSM840136_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1708 8c368a17 Daofeng Li 
GSM849344_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
1709 8c368a17 Daofeng Li 
GSM758564_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1710 8c368a17 Daofeng Li 
GSM935437_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1711 8c368a17 Daofeng Li 
GSM803360_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1712 8c368a17 Daofeng Li 
GSM822278_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
1713 8c368a17 Daofeng Li 
GSM816628_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
1714 8c368a17 Daofeng Li 
GSM803424_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1715 8c368a17 Daofeng Li 
GSM897083_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1716 8c368a17 Daofeng Li 
GSM736546_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
1717 8c368a17 Daofeng Li 
GSM803361_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1718 8c368a17 Daofeng Li 
GSM803502_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1719 8c368a17 Daofeng Li 
GSM958737_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq
1720 8c368a17 Daofeng Li 
GSM973679_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1721 8c368a17 Daofeng Li 
GSM803420_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1722 8c368a17 Daofeng Li 
GSM923453_6	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
1723 8c368a17 Daofeng Li 
GSM803371_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1724 8c368a17 Daofeng Li 
GSM973679_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1725 8c368a17 Daofeng Li 
GSM935478_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1726 8c368a17 Daofeng Li 
GSM849342_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
1727 8c368a17 Daofeng Li 
GSM758569_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1728 8c368a17 Daofeng Li 
GSM803385_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1729 8c368a17 Daofeng Li 
GSM765398_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1730 8c368a17 Daofeng Li 
GSM935311_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1731 8c368a17 Daofeng Li 
GSM816633_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
1732 8c368a17 Daofeng Li 
GSM758569_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1733 8c368a17 Daofeng Li 
GSM749665_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
1734 8c368a17 Daofeng Li 
GSM945165_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1735 8c368a17 Daofeng Li 
GSM816638_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
1736 8c368a17 Daofeng Li 
GSM736585_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
1737 8c368a17 Daofeng Li 
GSM830532_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
1738 8c368a17 Daofeng Li 
GSM758575_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1739 8c368a17 Daofeng Li 
GSM733758_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
1740 8c368a17 Daofeng Li 
GSM847565_1	Software=Bowtie, Cufflinks
1741 8c368a17 Daofeng Li 
GSM923439_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
1742 8c368a17 Daofeng Li 
GSM958733_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq
1743 8c368a17 Daofeng Li 
GSM767851_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1744 8c368a17 Daofeng Li 
GSM758567_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1745 8c368a17 Daofeng Li 
GSM897074_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1746 8c368a17 Daofeng Li 
GSM803470_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1747 8c368a17 Daofeng Li 
GSM803366_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1748 8c368a17 Daofeng Li 
GSM736636_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
1749 8c368a17 Daofeng Li 
GSM897070_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1750 8c368a17 Daofeng Li 
GSM945166_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1751 8c368a17 Daofeng Li 
GSM935546_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1752 8c368a17 Daofeng Li 
GSM935497_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1753 8c368a17 Daofeng Li 
GSM767852_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1754 8c368a17 Daofeng Li 
GSM803375_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1755 8c368a17 Daofeng Li 
GSM849350_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
1756 8c368a17 Daofeng Li 
GSM849301_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
1757 8c368a17 Daofeng Li 
GSM736635_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
1758 8c368a17 Daofeng Li 
GSM758566_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1759 8c368a17 Daofeng Li 
GSM646564_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
1760 8c368a17 Daofeng Li 
GSM765390_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1761 8c368a17 Daofeng Li 
GSM923452_7	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
1762 8c368a17 Daofeng Li 
GSM935583_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1763 8c368a17 Daofeng Li 
GSM973691_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1764 8c368a17 Daofeng Li 
GSM758566_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1765 8c368a17 Daofeng Li 
GSM831025_1	Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters.  Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)).  Reads were extended to 200 bp using the -e parameter, otherwise defaults were used.  The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp.
1766 8c368a17 Daofeng Li 
GSM803400_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1767 8c368a17 Daofeng Li 
GSM765396_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1768 8c368a17 Daofeng Li 
GSM945279_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1769 8c368a17 Daofeng Li 
GSM736638_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
1770 8c368a17 Daofeng Li 
GSM803333_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1771 8c368a17 Daofeng Li 
GSM646562_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
1772 8c368a17 Daofeng Li 
GSM923440_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
1773 8c368a17 Daofeng Li 
GSM923450_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
1774 8c368a17 Daofeng Li 
GSM864355_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
1775 8c368a17 Daofeng Li 
GSM923418_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq
1776 8c368a17 Daofeng Li 
GSM736593_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
1777 8c368a17 Daofeng Li 
GSM749748_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
1778 8c368a17 Daofeng Li 
GSM945320_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1779 8c368a17 Daofeng Li 
GSM803477_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1780 8c368a17 Daofeng Li 
GSM736527_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
1781 8c368a17 Daofeng Li 
GSM977043_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1782 8c368a17 Daofeng Li 
GSM945303_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1783 8c368a17 Daofeng Li 
GSM803499_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1784 8c368a17 Daofeng Li 
GSM605628_5	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1785 8c368a17 Daofeng Li 
GSM849031_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
1786 8c368a17 Daofeng Li 
GSM733727_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
1787 8c368a17 Daofeng Li 
GSM935335_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1788 8c368a17 Daofeng Li 
GSM945241_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1789 8c368a17 Daofeng Li 
GSM736584_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
1790 8c368a17 Daofeng Li 
GSM758570_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1791 8c368a17 Daofeng Li 
GSM945306_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1792 8c368a17 Daofeng Li 
GSM816664_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
1793 8c368a17 Daofeng Li 
GSM816641_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
1794 8c368a17 Daofeng Li 
GSM803432_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1795 8c368a17 Daofeng Li 
GSM822302_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
1796 8c368a17 Daofeng Li 
GSM945217_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1797 8c368a17 Daofeng Li 
GSM803440_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1798 8c368a17 Daofeng Li 
GSM935337_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1799 8c368a17 Daofeng Li 
GSM973662_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1800 8c368a17 Daofeng Li 
GSM736627_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
1801 8c368a17 Daofeng Li 
GSM849325_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
1802 8c368a17 Daofeng Li 
GSM749728_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
1803 8c368a17 Daofeng Li 
GSM803494_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1804 8c368a17 Daofeng Li 
GSM605634_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1805 8c368a17 Daofeng Li 
GSM945199_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1806 8c368a17 Daofeng Li 
GSM822305_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
1807 8c368a17 Daofeng Li 
GSM749729_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
1808 8c368a17 Daofeng Li 
GSM758578_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1809 8c368a17 Daofeng Li 
GSM945215_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1810 8c368a17 Daofeng Li 
GSM958740_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq
1811 8c368a17 Daofeng Li 
GSM935356_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1812 8c368a17 Daofeng Li 
GSM767850_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1813 8c368a17 Daofeng Li 
GSM736576_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
1814 8c368a17 Daofeng Li 
GSM849339_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
1815 8c368a17 Daofeng Li 
GSM935591_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1816 8c368a17 Daofeng Li 
GSM749702_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
1817 8c368a17 Daofeng Li 
GSM977049_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1818 8c368a17 Daofeng Li 
GSM945215_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1819 8c368a17 Daofeng Li 
GSM847564_1	Software=Bowtie, Cufflinks
1820 8c368a17 Daofeng Li 
GSM736539_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
1821 8c368a17 Daofeng Li 
GSM830530_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
1822 8c368a17 Daofeng Li 
GSM816658_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
1823 8c368a17 Daofeng Li 
GSM749700_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
1824 8c368a17 Daofeng Li 
GSM758562_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1825 8c368a17 Daofeng Li 
GSM803419_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1826 8c368a17 Daofeng Li 
GSM803483_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1827 8c368a17 Daofeng Li 
GSM605632_6	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1828 8c368a17 Daofeng Li 
GSM923450_6	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
1829 8c368a17 Daofeng Li 
GSM749713_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
1830 8c368a17 Daofeng Li 
GSM973664_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1831 8c368a17 Daofeng Li 
GSM945298_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1832 8c368a17 Daofeng Li 
GSM733764_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
1833 8c368a17 Daofeng Li 
GSM816631_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
1834 8c368a17 Daofeng Li 
GSM803497_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1835 8c368a17 Daofeng Li 
GSM818826_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhHistone
1836 8c368a17 Daofeng Li 
GSM749673_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
1837 8c368a17 Daofeng Li 
GSM733736_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
1838 8c368a17 Daofeng Li 
GSM803488_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1839 8c368a17 Daofeng Li 
GSM935489_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1840 8c368a17 Daofeng Li 
GSM758567_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1841 8c368a17 Daofeng Li 
GSM935466_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1842 8c368a17 Daofeng Li 
GSM973681_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1843 8c368a17 Daofeng Li 
GSM977041_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1844 8c368a17 Daofeng Li 
GSM935304_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1845 8c368a17 Daofeng Li 
GSM803525_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1846 8c368a17 Daofeng Li 
GSM749701_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
1847 8c368a17 Daofeng Li 
GSM816634_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
1848 8c368a17 Daofeng Li 
GSM935534_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1849 8c368a17 Daofeng Li 
GSM736592_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
1850 8c368a17 Daofeng Li 
GSM935316_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1851 8c368a17 Daofeng Li 
GSM897073_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1852 8c368a17 Daofeng Li 
GSM803497_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1853 8c368a17 Daofeng Li 
GSM822282_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
1854 8c368a17 Daofeng Li 
GSM847561_1	Software=Bowtie, Cufflinks
1855 8c368a17 Daofeng Li 
GSM935351_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1856 8c368a17 Daofeng Li 
GSM897081_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1857 8c368a17 Daofeng Li 
GSM973693_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1858 8c368a17 Daofeng Li 
GSM733762_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
1859 8c368a17 Daofeng Li 
GSM923448_8	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
1860 8c368a17 Daofeng Li 
GSM920558_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhNsome
1861 8c368a17 Daofeng Li 
GSM765397_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1862 8c368a17 Daofeng Li 
GSM803357_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1863 8c368a17 Daofeng Li 
GSM945159_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1864 8c368a17 Daofeng Li 
GSM816638_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
1865 8c368a17 Daofeng Li 
GSM605627_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1866 8c368a17 Daofeng Li 
GSM897081_5	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1867 8c368a17 Daofeng Li 
GSM977042_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1868 8c368a17 Daofeng Li 
GSM749721_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
1869 8c368a17 Daofeng Li 
GSM765401_5	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1870 8c368a17 Daofeng Li 
GSM923443_6	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
1871 8c368a17 Daofeng Li 
GSM864341_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
1872 8c368a17 Daofeng Li 
GSM935598_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1873 8c368a17 Daofeng Li 
GSM923441_7	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
1874 8c368a17 Daofeng Li 
GSM803521_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1875 8c368a17 Daofeng Li 
GSM864337_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
1876 8c368a17 Daofeng Li 
GSM935414_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1877 8c368a17 Daofeng Li 
GSM945200_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1878 8c368a17 Daofeng Li 
GSM767844_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1879 8c368a17 Daofeng Li 
GSM958742_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq
1880 8c368a17 Daofeng Li 
GSM945261_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1881 8c368a17 Daofeng Li 
GSM945171_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1882 8c368a17 Daofeng Li 
GSM733733_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
1883 8c368a17 Daofeng Li 
GSM749741_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
1884 8c368a17 Daofeng Li 
GSM605627_5	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1885 8c368a17 Daofeng Li 
GSM849344_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
1886 8c368a17 Daofeng Li 
GSM935596_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1887 8c368a17 Daofeng Li 
GSM897070_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1888 8c368a17 Daofeng Li 
GSM945214_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1889 8c368a17 Daofeng Li 
GSM935519_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1890 8c368a17 Daofeng Li 
GSM849359_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
1891 8c368a17 Daofeng Li 
GSM973670_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1892 8c368a17 Daofeng Li 
GSM646567_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
1893 8c368a17 Daofeng Li 
GSM736624_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
1894 8c368a17 Daofeng Li 
GSM977033_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1895 8c368a17 Daofeng Li 
GSM935395_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1896 8c368a17 Daofeng Li 
GSM816436_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1897 8c368a17 Daofeng Li 
GSM945274_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1898 8c368a17 Daofeng Li 
GSM831040_1	Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters.  Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)).  Reads were extended to 200 bp using the -e parameter, otherwise defaults were used.  The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp.
1899 8c368a17 Daofeng Li 
GSM803480_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1900 8c368a17 Daofeng Li 
GSM803517_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1901 8c368a17 Daofeng Li 
GSM849336_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
1902 8c368a17 Daofeng Li 
GSM646566_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
1903 8c368a17 Daofeng Li 
GSM646569_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
1904 8c368a17 Daofeng Li 
GSM803501_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1905 8c368a17 Daofeng Li 
GSM864358_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
1906 8c368a17 Daofeng Li 
GSM822280_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
1907 8c368a17 Daofeng Li 
GSM803383_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1908 8c368a17 Daofeng Li 
GSM736555_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
1909 8c368a17 Daofeng Li 
GSM935508_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1910 8c368a17 Daofeng Li 
GSM935340_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1911 8c368a17 Daofeng Li 
GSM840137_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1912 8c368a17 Daofeng Li 
GSM736594_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
1913 8c368a17 Daofeng Li 
GSM803468_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1914 8c368a17 Daofeng Li 
GSM973688_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1915 8c368a17 Daofeng Li 
GSM749720_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
1916 8c368a17 Daofeng Li 
GSM803423_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1917 8c368a17 Daofeng Li 
GSM849030_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
1918 8c368a17 Daofeng Li 
GSM945285_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1919 8c368a17 Daofeng Li 
GSM803468_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1920 8c368a17 Daofeng Li 
GSM803401_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1921 8c368a17 Daofeng Li 
GSM945218_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1922 8c368a17 Daofeng Li 
GSM803392_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1923 8c368a17 Daofeng Li 
GSM973685_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1924 8c368a17 Daofeng Li 
GSM736500_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
1925 8c368a17 Daofeng Li 
GSM945307_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1926 8c368a17 Daofeng Li 
GSM605634_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1927 8c368a17 Daofeng Li 
GSM733748_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
1928 8c368a17 Daofeng Li 
GSM897069_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1929 8c368a17 Daofeng Li 
GSM733664_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
1930 8c368a17 Daofeng Li 
GSM897083_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1931 8c368a17 Daofeng Li 
GSM758562_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1932 8c368a17 Daofeng Li 
GSM749770_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
1933 8c368a17 Daofeng Li 
GSM973673_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1934 8c368a17 Daofeng Li 
GSM765405_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1935 8c368a17 Daofeng Li 
GSM749707_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
1936 8c368a17 Daofeng Li 
GSM736591_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
1937 8c368a17 Daofeng Li 
GSM849365_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
1938 8c368a17 Daofeng Li 
GSM803362_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1939 8c368a17 Daofeng Li 
GSM935502_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1940 8c368a17 Daofeng Li 
GSM935406_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1941 8c368a17 Daofeng Li 
GSM945855_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhHistone
1942 8c368a17 Daofeng Li 
GSM958733_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq
1943 8c368a17 Daofeng Li 
GSM935602_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1944 8c368a17 Daofeng Li 
GSM935647_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1945 8c368a17 Daofeng Li 
GSM849367_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
1946 8c368a17 Daofeng Li 
GSM849358_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
1947 8c368a17 Daofeng Li 
GSM749691_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
1948 8c368a17 Daofeng Li 
GSM733695_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
1949 8c368a17 Daofeng Li 
GSM923428_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq
1950 8c368a17 Daofeng Li 
GSM767846_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1951 8c368a17 Daofeng Li 
GSM935275_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1952 8c368a17 Daofeng Li 
GSM803445_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1953 8c368a17 Daofeng Li 
GSM803490_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1954 8c368a17 Daofeng Li 
GSM803369_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1955 8c368a17 Daofeng Li 
GSM864348_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
1956 8c368a17 Daofeng Li 
GSM816667_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
1957 8c368a17 Daofeng Li 
GSM977028_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1958 8c368a17 Daofeng Li 
GSM816635_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
1959 8c368a17 Daofeng Li 
GSM945233_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1960 8c368a17 Daofeng Li 
GSM973683_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1961 8c368a17 Daofeng Li 
GSM864349_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
1962 8c368a17 Daofeng Li 
GSM864356_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
1963 8c368a17 Daofeng Li 
GSM923449_7	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
1964 8c368a17 Daofeng Li 
GSM803341_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1965 8c368a17 Daofeng Li 
GSM749682_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
1966 8c368a17 Daofeng Li 
GSM816649_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
1967 8c368a17 Daofeng Li 
GSM816663_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
1968 8c368a17 Daofeng Li 
GSM749674_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
1969 8c368a17 Daofeng Li 
GSM945304_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1970 8c368a17 Daofeng Li 
GSM945219_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1971 8c368a17 Daofeng Li 
GSM749670_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
1972 8c368a17 Daofeng Li 
GSM803450_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1973 8c368a17 Daofeng Li 
GSM945229_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1974 8c368a17 Daofeng Li 
GSM973669_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1975 8c368a17 Daofeng Li 
GSM733779_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
1976 8c368a17 Daofeng Li 
GSM803496_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1977 8c368a17 Daofeng Li 
GSM758576_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1978 8c368a17 Daofeng Li 
GSM765396_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1979 8c368a17 Daofeng Li 
GSM973687_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1980 8c368a17 Daofeng Li 
GSM973688_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1981 8c368a17 Daofeng Li 
GSM758569_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1982 8c368a17 Daofeng Li 
GSM922957_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhRnaSeq
1983 8c368a17 Daofeng Li 
GSM958736_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq
1984 8c368a17 Daofeng Li 
GSM935608_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
1985 8c368a17 Daofeng Li 
GSM923442_6	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
1986 8c368a17 Daofeng Li 
GSM733702_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
1987 8c368a17 Daofeng Li 
GSM849348_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
1988 8c368a17 Daofeng Li 
GSM945264_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1989 8c368a17 Daofeng Li 
GSM803450_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1990 8c368a17 Daofeng Li 
GSM945254_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
1991 8c368a17 Daofeng Li 
GSM803344_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
1992 8c368a17 Daofeng Li 
GSM733775_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
1993 8c368a17 Daofeng Li 
GSM923448_5	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
1994 8c368a17 Daofeng Li 
GSM864339_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
1995 8c368a17 Daofeng Li 
GSM767848_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
1996 8c368a17 Daofeng Li 
GSM830531_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
1997 8c368a17 Daofeng Li 
GSM977051_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1998 8c368a17 Daofeng Li 
GSM973663_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
1999 8c368a17 Daofeng Li 
GSM765400_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2000 8c368a17 Daofeng Li 
GSM605625_6	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2001 8c368a17 Daofeng Li 
GSM816663_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
2002 8c368a17 Daofeng Li 
GSM897076_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2003 8c368a17 Daofeng Li 
GSM803447_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2004 8c368a17 Daofeng Li 
GSM803472_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2005 8c368a17 Daofeng Li 
GSM945295_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2006 8c368a17 Daofeng Li 
GSM897080_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2007 8c368a17 Daofeng Li 
GSM977050_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2008 8c368a17 Daofeng Li 
GSM765389_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2009 8c368a17 Daofeng Li 
GSM849357_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
2010 8c368a17 Daofeng Li 
GSM977047_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2011 8c368a17 Daofeng Li 
GSM736533_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
2012 8c368a17 Daofeng Li 
GSM733743_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
2013 8c368a17 Daofeng Li 
GSM803376_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2014 8c368a17 Daofeng Li 
GSM935456_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2015 8c368a17 Daofeng Li 
GSM958741_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq
2016 8c368a17 Daofeng Li 
GSM945256_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2017 8c368a17 Daofeng Li 
GSM945181_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2018 8c368a17 Daofeng Li 
GSM849359_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
2019 8c368a17 Daofeng Li 
GSM935526_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2020 8c368a17 Daofeng Li 
GSM733681_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
2021 8c368a17 Daofeng Li 
GSM920557_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhNsome
2022 8c368a17 Daofeng Li 
GSM788074_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhHistone
2023 8c368a17 Daofeng Li 
GSM788072_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhHistone
2024 8c368a17 Daofeng Li 
GSM945858_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhHistone
2025 8c368a17 Daofeng Li 
GSM945308_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2026 8c368a17 Daofeng Li 
GSM977028_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2027 8c368a17 Daofeng Li 
GSM849352_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
2028 8c368a17 Daofeng Li 
GSM935398_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2029 8c368a17 Daofeng Li 
GSM672834_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaSeq
2030 8c368a17 Daofeng Li 
GSM605630_5	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2031 8c368a17 Daofeng Li 
GSM788070_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhHistone
2032 8c368a17 Daofeng Li 
GSM749675_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
2033 8c368a17 Daofeng Li 
GSM736529_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
2034 8c368a17 Daofeng Li 
GSM608165_1	Alignment=Sequence reads were obtained and mapped to the human genome assembly hg18 (March, 2006) or hg19 (February, 2009) using the Illumina Genome Analyzer Pipeline. All reads mapping with two or fewer mismatches were retained and read starts were summed in sliding windows of 400 bp to create summary windows.; Peak Calling=Peaks were called with Sole-Search (http://chipseq.genomecenter.ucdavis.edu/cgi-bin/chipseq.cgi)
2035 8c368a17 Daofeng Li 
GSM958734_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq
2036 8c368a17 Daofeng Li 
GSM923443_5	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
2037 8c368a17 Daofeng Li 
GSM935444_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2038 8c368a17 Daofeng Li 
GSM897069_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2039 8c368a17 Daofeng Li 
GSM646566_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
2040 8c368a17 Daofeng Li 
GSM822276_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
2041 8c368a17 Daofeng Li 
GSM935338_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2042 8c368a17 Daofeng Li 
GSM935634_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2043 8c368a17 Daofeng Li 
GSM749756_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
2044 8c368a17 Daofeng Li 
GSM816640_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
2045 8c368a17 Daofeng Li 
GSM935541_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2046 8c368a17 Daofeng Li 
GSM935653_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2047 8c368a17 Daofeng Li 
GSM749681_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
2048 8c368a17 Daofeng Li 
GSM923439_5	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
2049 8c368a17 Daofeng Li 
GSM935459_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2050 8c368a17 Daofeng Li 
GSM749692_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
2051 8c368a17 Daofeng Li 
GSM767851_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2052 8c368a17 Daofeng Li 
GSM945231_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2053 8c368a17 Daofeng Li 
GSM816673_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
2054 8c368a17 Daofeng Li 
GSM816637_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
2055 8c368a17 Daofeng Li 
GSM822270_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
2056 8c368a17 Daofeng Li 
GSM958740_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq
2057 8c368a17 Daofeng Li 
GSM749696_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
2058 8c368a17 Daofeng Li 
GSM945202_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2059 8c368a17 Daofeng Li 
GSM958737_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq
2060 8c368a17 Daofeng Li 
GSM935450_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2061 8c368a17 Daofeng Li 
GSM977050_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2062 8c368a17 Daofeng Li 
GSM803514_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2063 8c368a17 Daofeng Li 
GSM849327_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
2064 8c368a17 Daofeng Li 
GSM958729_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq
2065 8c368a17 Daofeng Li 
GSM945859_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhHistone
2066 8c368a17 Daofeng Li 
GSM765398_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2067 8c368a17 Daofeng Li 
GSM733671_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
2068 8c368a17 Daofeng Li 
GSM831000_1	Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters.  Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)).  Reads were extended to 200 bp using the -e parameter, otherwise defaults were used.  The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp.
2069 8c368a17 Daofeng Li 
GSM935482_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2070 8c368a17 Daofeng Li 
GSM736605_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
2071 8c368a17 Daofeng Li 
GSM765400_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2072 8c368a17 Daofeng Li 
GSM803518_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2073 8c368a17 Daofeng Li 
GSM945259_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2074 8c368a17 Daofeng Li 
GSM733700_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
2075 8c368a17 Daofeng Li 
GSM945257_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2076 8c368a17 Daofeng Li 
GSM935578_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2077 8c368a17 Daofeng Li 
GSM749774_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
2078 8c368a17 Daofeng Li 
GSM945853_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhHistone
2079 8c368a17 Daofeng Li 
GSM935537_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2080 8c368a17 Daofeng Li 
GSM945309_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2081 8c368a17 Daofeng Li 
GSM803442_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2082 8c368a17 Daofeng Li 
GSM816630_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
2083 8c368a17 Daofeng Li 
GSM973680_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2084 8c368a17 Daofeng Li 
GSM736566_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
2085 8c368a17 Daofeng Li 
GSM923444_14	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
2086 8c368a17 Daofeng Li 
GSM935325_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2087 8c368a17 Daofeng Li 
GSM935417_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2088 8c368a17 Daofeng Li 
GSM923440_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
2089 8c368a17 Daofeng Li 
GSM765398_5	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2090 8c368a17 Daofeng Li 
GSM935312_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2091 8c368a17 Daofeng Li 
GSM758563_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2092 8c368a17 Daofeng Li 
GSM803486_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2093 8c368a17 Daofeng Li 
GSM758577_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2094 8c368a17 Daofeng Li 
GSM803343_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2095 8c368a17 Daofeng Li 
GSM935621_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2096 8c368a17 Daofeng Li 
GSM758574_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2097 8c368a17 Daofeng Li 
GSM935400_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2098 8c368a17 Daofeng Li 
GSM923427_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq
2099 8c368a17 Daofeng Li 
GSM749697_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
2100 8c368a17 Daofeng Li 
GSM733760_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
2101 8c368a17 Daofeng Li 
GSM849333_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
2102 8c368a17 Daofeng Li 
GSM935577_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2103 8c368a17 Daofeng Li 
GSM923449_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
2104 8c368a17 Daofeng Li 
GSM765393_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2105 8c368a17 Daofeng Li 
GSM958730_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq
2106 8c368a17 Daofeng Li 
GSM803404_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2107 8c368a17 Daofeng Li 
GSM736495_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
2108 8c368a17 Daofeng Li 
GSM816672_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
2109 8c368a17 Daofeng Li 
GSM822282_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
2110 8c368a17 Daofeng Li 
GSM935615_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2111 8c368a17 Daofeng Li 
GSM973666_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2112 8c368a17 Daofeng Li 
GSM973693_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2113 8c368a17 Daofeng Li 
GSM816662_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
2114 8c368a17 Daofeng Li 
GSM935616_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2115 8c368a17 Daofeng Li 
GSM923447_5	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
2116 8c368a17 Daofeng Li 
GSM816627_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
2117 8c368a17 Daofeng Li 
GSM958732_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq
2118 8c368a17 Daofeng Li 
GSM977044_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2119 8c368a17 Daofeng Li 
GSM864351_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
2120 8c368a17 Daofeng Li 
GSM749667_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
2121 8c368a17 Daofeng Li 
GSM758568_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2122 8c368a17 Daofeng Li 
GSM765403_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2123 8c368a17 Daofeng Li 
GSM977029_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2124 8c368a17 Daofeng Li 
GSM803397_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2125 8c368a17 Daofeng Li 
GSM803416_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2126 8c368a17 Daofeng Li 
GSM765392_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2127 8c368a17 Daofeng Li 
GSM765403_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2128 8c368a17 Daofeng Li 
GSM803406_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2129 8c368a17 Daofeng Li 
GSM897084_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2130 8c368a17 Daofeng Li 
GSM749718_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
2131 8c368a17 Daofeng Li 
GSM970218_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhHistone
2132 8c368a17 Daofeng Li 
GSM935474_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2133 8c368a17 Daofeng Li 
GSM830993_1	Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters.  Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)).  Reads were extended to 200 bp using the -e parameter, otherwise defaults were used.  The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp.
2134 8c368a17 Daofeng Li 
GSM945244_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2135 8c368a17 Daofeng Li 
GSM825711_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2136 8c368a17 Daofeng Li 
GSM945314_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2137 8c368a17 Daofeng Li 
GSM973670_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2138 8c368a17 Daofeng Li 
GSM803352_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2139 8c368a17 Daofeng Li 
GSM803474_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2140 8c368a17 Daofeng Li 
GSM646565_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
2141 8c368a17 Daofeng Li 
GSM758564_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2142 8c368a17 Daofeng Li 
GSM736589_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
2143 8c368a17 Daofeng Li 
GSM803522_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2144 8c368a17 Daofeng Li 
GSM935529_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2145 8c368a17 Daofeng Li 
GSM935485_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2146 8c368a17 Daofeng Li 
GSM830999_1	Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters.  Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)).  Reads were extended to 200 bp using the -e parameter, otherwise defaults were used.  The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp.
2147 8c368a17 Daofeng Li 
GSM849358_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
2148 8c368a17 Daofeng Li 
GSM736508_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
2149 8c368a17 Daofeng Li 
GSM803520_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2150 8c368a17 Daofeng Li 
GSM822275_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
2151 8c368a17 Daofeng Li 
GSM816667_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
2152 8c368a17 Daofeng Li 
GSM958747_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq
2153 8c368a17 Daofeng Li 
GSM788088_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhHistone
2154 8c368a17 Daofeng Li 
GSM935636_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2155 8c368a17 Daofeng Li 
GSM803458_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2156 8c368a17 Daofeng Li 
GSM803533_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2157 8c368a17 Daofeng Li 
GSM803540_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2158 8c368a17 Daofeng Li 
GSM816657_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
2159 8c368a17 Daofeng Li 
GSM923434_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq
2160 8c368a17 Daofeng Li 
GSM765399_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2161 8c368a17 Daofeng Li 
GSM803477_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2162 8c368a17 Daofeng Li 
GSM803391_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2163 8c368a17 Daofeng Li 
GSM945302_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2164 8c368a17 Daofeng Li 
GSM973691_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2165 8c368a17 Daofeng Li 
GSM897070_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2166 8c368a17 Daofeng Li 
GSM973684_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2167 8c368a17 Daofeng Li 
GSM977044_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2168 8c368a17 Daofeng Li 
GSM977030_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2169 8c368a17 Daofeng Li 
GSM935576_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2170 8c368a17 Daofeng Li 
GSM935487_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2171 8c368a17 Daofeng Li 
GSM749771_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
2172 8c368a17 Daofeng Li 
GSM935376_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2173 8c368a17 Daofeng Li 
GSM758577_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2174 8c368a17 Daofeng Li 
GSM803455_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2175 8c368a17 Daofeng Li 
GSM864355_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
2176 8c368a17 Daofeng Li 
GSM935432_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2177 8c368a17 Daofeng Li 
GSM935635_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2178 8c368a17 Daofeng Li 
GSM816648_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
2179 8c368a17 Daofeng Li 
GSM935305_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2180 8c368a17 Daofeng Li 
GSM765388_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2181 8c368a17 Daofeng Li 
GSM864350_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
2182 8c368a17 Daofeng Li 
GSM803507_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2183 8c368a17 Daofeng Li 
GSM788085_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhHistone
2184 8c368a17 Daofeng Li 
GSM803411_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2185 8c368a17 Daofeng Li 
GSM945189_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2186 8c368a17 Daofeng Li 
GSM973677_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2187 8c368a17 Daofeng Li 
GSM822278_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
2188 8c368a17 Daofeng Li 
GSM758568_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2189 8c368a17 Daofeng Li 
GSM923443_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
2190 8c368a17 Daofeng Li 
GSM935557_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2191 8c368a17 Daofeng Li 
GSM945323_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2192 8c368a17 Daofeng Li 
GSM935477_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2193 8c368a17 Daofeng Li 
GSM831013_1	Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters.  Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)).  Reads were extended to 200 bp using the -e parameter, otherwise defaults were used.  The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp.
2194 8c368a17 Daofeng Li 
GSM733782_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
2195 8c368a17 Daofeng Li 
GSM849332_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
2196 8c368a17 Daofeng Li 
GSM945201_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2197 8c368a17 Daofeng Li 
GSM935411_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2198 8c368a17 Daofeng Li 
GSM605631_2	hg18=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg18&g=wgEncodeCshlShortRnaSeq; hg19=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2199 8c368a17 Daofeng Li 
GSM935609_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2200 8c368a17 Daofeng Li 
GSM935493_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2201 8c368a17 Daofeng Li 
GSM923433_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq
2202 8c368a17 Daofeng Li 
GSM803400_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2203 8c368a17 Daofeng Li 
GSM803386_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2204 8c368a17 Daofeng Li 
GSM923439_6	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
2205 8c368a17 Daofeng Li 
GSM803509_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2206 8c368a17 Daofeng Li 
GSM733766_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
2207 8c368a17 Daofeng Li 
GSM803462_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2208 8c368a17 Daofeng Li 
GSM749703_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
2209 8c368a17 Daofeng Li 
GSM977032_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2210 8c368a17 Daofeng Li 
GSM849340_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
2211 8c368a17 Daofeng Li 
GSM816648_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
2212 8c368a17 Daofeng Li 
GSM733726_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
2213 8c368a17 Daofeng Li 
GSM765387_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2214 8c368a17 Daofeng Li 
GSM749744_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
2215 8c368a17 Daofeng Li 
GSM749733_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
2216 8c368a17 Daofeng Li 
GSM803510_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2217 8c368a17 Daofeng Li 
GSM935567_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2218 8c368a17 Daofeng Li 
GSM945166_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2219 8c368a17 Daofeng Li 
GSM749725_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
2220 8c368a17 Daofeng Li 
GSM945321_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2221 8c368a17 Daofeng Li 
GSM765401_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2222 8c368a17 Daofeng Li 
GSM958747_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq
2223 8c368a17 Daofeng Li 
GSM923452_5	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
2224 8c368a17 Daofeng Li 
GSM923443_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
2225 8c368a17 Daofeng Li 
GSM736534_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
2226 8c368a17 Daofeng Li 
GSM923440_8	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
2227 8c368a17 Daofeng Li 
GSM605631_1	hg18=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg18&g=wgEncodeCshlShortRnaSeq; hg19=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2228 8c368a17 Daofeng Li 
GSM935556_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2229 8c368a17 Daofeng Li 
GSM923419_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq
2230 8c368a17 Daofeng Li 
GSM803453_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2231 8c368a17 Daofeng Li 
GSM803349_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2232 8c368a17 Daofeng Li 
GSM944524_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSunyRipSeq
2233 8c368a17 Daofeng Li 
GSM945318_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2234 8c368a17 Daofeng Li 
GSM736599_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
2235 8c368a17 Daofeng Li 
GSM822274_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
2236 8c368a17 Daofeng Li 
GSM803464_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2237 8c368a17 Daofeng Li 
GSM736559_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
2238 8c368a17 Daofeng Li 
GSM822274_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
2239 8c368a17 Daofeng Li 
GSM935423_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2240 8c368a17 Daofeng Li 
GSM605630_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2241 8c368a17 Daofeng Li 
GSM849324_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
2242 8c368a17 Daofeng Li 
GSM767845_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2243 8c368a17 Daofeng Li 
GSM605634_6	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2244 8c368a17 Daofeng Li 
GSM803335_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2245 8c368a17 Daofeng Li 
GSM935344_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2246 8c368a17 Daofeng Li 
GSM849029_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
2247 8c368a17 Daofeng Li 
GSM849341_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
2248 8c368a17 Daofeng Li 
GSM803531_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2249 8c368a17 Daofeng Li 
GSM897080_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2250 8c368a17 Daofeng Li 
GSM816668_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
2251 8c368a17 Daofeng Li 
GSM822312_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
2252 8c368a17 Daofeng Li 
GSM749683_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
2253 8c368a17 Daofeng Li 
GSM935405_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2254 8c368a17 Daofeng Li 
GSM897080_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2255 8c368a17 Daofeng Li 
GSM945213_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2256 8c368a17 Daofeng Li 
GSM973687_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2257 8c368a17 Daofeng Li 
GSM935454_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2258 8c368a17 Daofeng Li 
GSM831018_1	Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters.  Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)).  Reads were extended to 200 bp using the -e parameter, otherwise defaults were used.  The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp.
2259 8c368a17 Daofeng Li 
GSM935409_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2260 8c368a17 Daofeng Li 
GSM935308_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2261 8c368a17 Daofeng Li 
GSM803344_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2262 8c368a17 Daofeng Li 
GSM935318_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2263 8c368a17 Daofeng Li 
GSM935343_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2264 8c368a17 Daofeng Li 
GSM935392_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2265 8c368a17 Daofeng Li 
GSM923444_16	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
2266 8c368a17 Daofeng Li 
GSM935438_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2267 8c368a17 Daofeng Li 
GSM935631_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2268 8c368a17 Daofeng Li 
GSM849335_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
2269 8c368a17 Daofeng Li 
GSM973661_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2270 8c368a17 Daofeng Li 
GSM767847_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2271 8c368a17 Daofeng Li 
GSM736634_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
2272 8c368a17 Daofeng Li 
GSM816654_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
2273 8c368a17 Daofeng Li 
GSM849304_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
2274 8c368a17 Daofeng Li 
GSM935639_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2275 8c368a17 Daofeng Li 
GSM935626_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2276 8c368a17 Daofeng Li 
GSM849347_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
2277 8c368a17 Daofeng Li 
GSM897085_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2278 8c368a17 Daofeng Li 
GSM935407_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2279 8c368a17 Daofeng Li 
GSM945319_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2280 8c368a17 Daofeng Li 
GSM736633_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
2281 8c368a17 Daofeng Li 
GSM923449_6	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
2282 8c368a17 Daofeng Li 
GSM803431_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2283 8c368a17 Daofeng Li 
GSM864343_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
2284 8c368a17 Daofeng Li 
GSM803480_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2285 8c368a17 Daofeng Li 
GSM736617_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
2286 8c368a17 Daofeng Li 
GSM758571_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2287 8c368a17 Daofeng Li 
GSM945263_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2288 8c368a17 Daofeng Li 
GSM945182_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2289 8c368a17 Daofeng Li 
GSM605629_6	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2290 8c368a17 Daofeng Li 
GSM935629_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2291 8c368a17 Daofeng Li 
GSM864357_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
2292 8c368a17 Daofeng Li 
GSM935408_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2293 8c368a17 Daofeng Li 
GSM822297_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
2294 8c368a17 Daofeng Li 
GSM830998_1	Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters.  Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)).  Reads were extended to 200 bp using the -e parameter, otherwise defaults were used.  The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp.
2295 8c368a17 Daofeng Li 
GSM803490_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2296 8c368a17 Daofeng Li 
GSM958731_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq
2297 8c368a17 Daofeng Li 
GSM935582_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2298 8c368a17 Daofeng Li 
GSM646559_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
2299 8c368a17 Daofeng Li 
GSM822307_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
2300 8c368a17 Daofeng Li 
GSM897077_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2301 8c368a17 Daofeng Li 
GSM935467_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2302 8c368a17 Daofeng Li 
GSM822308_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
2303 8c368a17 Daofeng Li 
GSM923439_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
2304 8c368a17 Daofeng Li 
GSM977029_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2305 8c368a17 Daofeng Li 
GSM816650_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
2306 8c368a17 Daofeng Li 
GSM935510_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2307 8c368a17 Daofeng Li 
GSM935545_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2308 8c368a17 Daofeng Li 
GSM847568_1	Software=Bowtie, Cufflinks
2309 8c368a17 Daofeng Li 
GSM803447_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2310 8c368a17 Daofeng Li 
GSM935530_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2311 8c368a17 Daofeng Li 
GSM816636_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
2312 8c368a17 Daofeng Li 
GSM945179_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2313 8c368a17 Daofeng Li 
GSM803375_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2314 8c368a17 Daofeng Li 
GSM736532_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
2315 8c368a17 Daofeng Li 
GSM945208_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2316 8c368a17 Daofeng Li 
GSM733752_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
2317 8c368a17 Daofeng Li 
GSM803395_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2318 8c368a17 Daofeng Li 
GSM803351_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2319 8c368a17 Daofeng Li 
GSM923426_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq
2320 8c368a17 Daofeng Li 
GSM849357_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
2321 8c368a17 Daofeng Li 
GSM935560_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2322 8c368a17 Daofeng Li 
GSM736540_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
2323 8c368a17 Daofeng Li 
GSM923432_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq
2324 8c368a17 Daofeng Li 
GSM935431_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2325 8c368a17 Daofeng Li 
GSM646569_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
2326 8c368a17 Daofeng Li 
GSM977036_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2327 8c368a17 Daofeng Li 
GSM830992_1	Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters.  Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)).  Reads were extended to 200 bp using the -e parameter, otherwise defaults were used.  The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp.
2328 8c368a17 Daofeng Li 
GSM830996_1	Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters.  Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)).  Reads were extended to 200 bp using the -e parameter, otherwise defaults were used.  The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp.
2329 8c368a17 Daofeng Li 
GSM736572_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
2330 8c368a17 Daofeng Li 
GSM977045_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2331 8c368a17 Daofeng Li 
GSM822311_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
2332 8c368a17 Daofeng Li 
GSM765404_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2333 8c368a17 Daofeng Li 
GSM977040_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2334 8c368a17 Daofeng Li 
GSM923446_5	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
2335 8c368a17 Daofeng Li 
GSM736567_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
2336 8c368a17 Daofeng Li 
GSM897086_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2337 8c368a17 Daofeng Li 
GSM945324_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2338 8c368a17 Daofeng Li 
GSM830990_1	Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters.  Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)).  Reads were extended to 200 bp using the -e parameter, otherwise defaults were used.  The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp.
2339 8c368a17 Daofeng Li 
GSM973678_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2340 8c368a17 Daofeng Li 
GSM803368_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2341 8c368a17 Daofeng Li 
GSM935590_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2342 8c368a17 Daofeng Li 
GSM803381_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2343 8c368a17 Daofeng Li 
GSM935568_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2344 8c368a17 Daofeng Li 
GSM767849_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2345 8c368a17 Daofeng Li 
GSM923424_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq
2346 8c368a17 Daofeng Li 
GSM736630_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
2347 8c368a17 Daofeng Li 
GSM803441_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2348 8c368a17 Daofeng Li 
GSM923439_7	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
2349 8c368a17 Daofeng Li 
GSM767853_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2350 8c368a17 Daofeng Li 
GSM733756_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
2351 8c368a17 Daofeng Li 
GSM672833_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaSeq
2352 8c368a17 Daofeng Li 
GSM935572_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2353 8c368a17 Daofeng Li 
GSM935370_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2354 8c368a17 Daofeng Li 
GSM935350_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2355 8c368a17 Daofeng Li 
GSM816669_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
2356 8c368a17 Daofeng Li 
GSM736573_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
2357 8c368a17 Daofeng Li 
GSM945181_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2358 8c368a17 Daofeng Li 
GSM849332_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
2359 8c368a17 Daofeng Li 
GSM803434_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2360 8c368a17 Daofeng Li 
GSM733654_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
2361 8c368a17 Daofeng Li 
GSM849025_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
2362 8c368a17 Daofeng Li 
GSM945232_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2363 8c368a17 Daofeng Li 
GSM945162_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2364 8c368a17 Daofeng Li 
GSM945168_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2365 8c368a17 Daofeng Li 
GSM605628_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2366 8c368a17 Daofeng Li 
GSM733641_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
2367 8c368a17 Daofeng Li 
GSM803361_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2368 8c368a17 Daofeng Li 
GSM935531_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2369 8c368a17 Daofeng Li 
GSM849368_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
2370 8c368a17 Daofeng Li 
GSM935393_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2371 8c368a17 Daofeng Li 
GSM788077_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhHistone
2372 8c368a17 Daofeng Li 
GSM736491_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
2373 8c368a17 Daofeng Li 
GSM830989_1	Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters.  Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)).  Reads were extended to 200 bp using the -e parameter, otherwise defaults were used.  The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp.
2374 8c368a17 Daofeng Li 
GSM923452_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
2375 8c368a17 Daofeng Li 
GSM973690_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2376 8c368a17 Daofeng Li 
GSM935430_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2377 8c368a17 Daofeng Li 
GSM803446_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2378 8c368a17 Daofeng Li 
GSM830525_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
2379 8c368a17 Daofeng Li 
GSM935633_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2380 8c368a17 Daofeng Li 
GSM945243_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2381 8c368a17 Daofeng Li 
GSM945163_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2382 8c368a17 Daofeng Li 
GSM758563_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2383 8c368a17 Daofeng Li 
GSM973687_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2384 8c368a17 Daofeng Li 
GSM977032_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2385 8c368a17 Daofeng Li 
GSM935521_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2386 8c368a17 Daofeng Li 
GSM749779_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
2387 8c368a17 Daofeng Li 
GSM958743_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq
2388 8c368a17 Daofeng Li 
GSM923434_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq
2389 8c368a17 Daofeng Li 
GSM923449_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
2390 8c368a17 Daofeng Li 
GSM749739_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
2391 8c368a17 Daofeng Li 
GSM958749_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq
2392 8c368a17 Daofeng Li 
GSM803493_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2393 8c368a17 Daofeng Li 
GSM923429_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq
2394 8c368a17 Daofeng Li 
GSM945187_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2395 8c368a17 Daofeng Li 
GSM830994_1	Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters.  Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)).  Reads were extended to 200 bp using the -e parameter, otherwise defaults were used.  The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp.
2396 8c368a17 Daofeng Li 
GSM973686_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2397 8c368a17 Daofeng Li 
GSM605625_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2398 8c368a17 Daofeng Li 
GSM923444_5	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
2399 8c368a17 Daofeng Li 
GSM849303_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
2400 8c368a17 Daofeng Li 
GSM733665_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
2401 8c368a17 Daofeng Li 
GSM923443_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
2402 8c368a17 Daofeng Li 
GSM733738_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
2403 8c368a17 Daofeng Li 
GSM849339_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
2404 8c368a17 Daofeng Li 
GSM935612_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2405 8c368a17 Daofeng Li 
GSM849328_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
2406 8c368a17 Daofeng Li 
GSM945265_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2407 8c368a17 Daofeng Li 
GSM945220_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2408 8c368a17 Daofeng Li 
GSM803471_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2409 8c368a17 Daofeng Li 
GSM945315_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2410 8c368a17 Daofeng Li 
GSM945253_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2411 8c368a17 Daofeng Li 
GSM672836_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaSeq
2412 8c368a17 Daofeng Li 
GSM935345_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2413 8c368a17 Daofeng Li 
GSM605629_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2414 8c368a17 Daofeng Li 
GSM897081_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2415 8c368a17 Daofeng Li 
GSM935410_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2416 8c368a17 Daofeng Li 
GSM767856_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2417 8c368a17 Daofeng Li 
GSM935506_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2418 8c368a17 Daofeng Li 
GSM849329_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
2419 8c368a17 Daofeng Li 
GSM765390_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2420 8c368a17 Daofeng Li 
GSM736552_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
2421 8c368a17 Daofeng Li 
GSM945228_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2422 8c368a17 Daofeng Li 
GSM935520_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2423 8c368a17 Daofeng Li 
GSM733649_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
2424 8c368a17 Daofeng Li 
GSM749758_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
2425 8c368a17 Daofeng Li 
GSM945184_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2426 8c368a17 Daofeng Li 
GSM830529_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
2427 8c368a17 Daofeng Li 
GSM831011_1	Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters.  Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)).  Reads were extended to 200 bp using the -e parameter, otherwise defaults were used.  The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp.
2428 8c368a17 Daofeng Li 
GSM803461_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2429 8c368a17 Daofeng Li 
GSM923441_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
2430 8c368a17 Daofeng Li 
GSM923435_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq
2431 8c368a17 Daofeng Li 
GSM935330_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2432 8c368a17 Daofeng Li 
GSM945275_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2433 8c368a17 Daofeng Li 
GSM897078_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2434 8c368a17 Daofeng Li 
GSM803378_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2435 8c368a17 Daofeng Li 
GSM733747_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
2436 8c368a17 Daofeng Li 
GSM945160_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2437 8c368a17 Daofeng Li 
GSM944522_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSunyRipSeq
2438 8c368a17 Daofeng Li 
GSM973668_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2439 8c368a17 Daofeng Li 
GSM749757_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
2440 8c368a17 Daofeng Li 
GSM977033_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2441 8c368a17 Daofeng Li 
GSM935355_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2442 8c368a17 Daofeng Li 
GSM749711_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
2443 8c368a17 Daofeng Li 
GSM803469_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2444 8c368a17 Daofeng Li 
GSM923441_8	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
2445 8c368a17 Daofeng Li 
GSM945286_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2446 8c368a17 Daofeng Li 
GSM765393_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2447 8c368a17 Daofeng Li 
GSM935365_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2448 8c368a17 Daofeng Li 
GSM945321_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2449 8c368a17 Daofeng Li 
GSM749746_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
2450 8c368a17 Daofeng Li 
GSM977028_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2451 8c368a17 Daofeng Li 
GSM803345_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2452 8c368a17 Daofeng Li 
GSM736632_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
2453 8c368a17 Daofeng Li 
GSM733754_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
2454 8c368a17 Daofeng Li 
GSM935525_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2455 8c368a17 Daofeng Li 
GSM935532_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2456 8c368a17 Daofeng Li 
GSM923451_8	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
2457 8c368a17 Daofeng Li 
GSM935620_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2458 8c368a17 Daofeng Li 
GSM973661_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2459 8c368a17 Daofeng Li 
GSM803347_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2460 8c368a17 Daofeng Li 
GSM945223_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2461 8c368a17 Daofeng Li 
GSM923448_7	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
2462 8c368a17 Daofeng Li 
GSM830533_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
2463 8c368a17 Daofeng Li 
GSM849335_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
2464 8c368a17 Daofeng Li 
GSM849327_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
2465 8c368a17 Daofeng Li 
GSM816655_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
2466 8c368a17 Daofeng Li 
GSM816660_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
2467 8c368a17 Daofeng Li 
GSM935380_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2468 8c368a17 Daofeng Li 
GSM935361_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2469 8c368a17 Daofeng Li 
GSM803426_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2470 8c368a17 Daofeng Li 
GSM822308_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
2471 8c368a17 Daofeng Li 
GSM733639_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
2472 8c368a17 Daofeng Li 
GSM816665_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
2473 8c368a17 Daofeng Li 
GSM816645_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
2474 8c368a17 Daofeng Li 
GSM803342_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2475 8c368a17 Daofeng Li 
GSM767849_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2476 8c368a17 Daofeng Li 
GSM923427_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq
2477 8c368a17 Daofeng Li 
GSM970217_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhHistone
2478 8c368a17 Daofeng Li 
GSM736580_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
2479 8c368a17 Daofeng Li 
GSM646567_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
2480 8c368a17 Daofeng Li 
GSM864358_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
2481 8c368a17 Daofeng Li 
GSM945238_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2482 8c368a17 Daofeng Li 
GSM831001_1	Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters.  Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)).  Reads were extended to 200 bp using the -e parameter, otherwise defaults were used.  The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp.
2483 8c368a17 Daofeng Li 
GSM840137_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2484 8c368a17 Daofeng Li 
GSM816666_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
2485 8c368a17 Daofeng Li 
GSM765402_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2486 8c368a17 Daofeng Li 
GSM605626_2	hg18=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg18&g=wgEncodeCshlShortRnaSeq; hg19=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2487 8c368a17 Daofeng Li 
GSM958744_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq
2488 8c368a17 Daofeng Li 
GSM830535_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
2489 8c368a17 Daofeng Li 
GSM849351_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
2490 8c368a17 Daofeng Li 
GSM803406_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2491 8c368a17 Daofeng Li 
GSM897071_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2492 8c368a17 Daofeng Li 
GSM733701_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
2493 8c368a17 Daofeng Li 
GSM830523_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
2494 8c368a17 Daofeng Li 
GSM758575_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2495 8c368a17 Daofeng Li 
GSM945177_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2496 8c368a17 Daofeng Li 
GSM758578_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2497 8c368a17 Daofeng Li 
GSM736586_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
2498 8c368a17 Daofeng Li 
GSM736588_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
2499 8c368a17 Daofeng Li 
GSM803511_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2500 8c368a17 Daofeng Li 
GSM830522_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
2501 8c368a17 Daofeng Li 
GSM935606_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2502 8c368a17 Daofeng Li 
GSM935573_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2503 8c368a17 Daofeng Li 
GSM733763_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
2504 8c368a17 Daofeng Li 
GSM945290_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2505 8c368a17 Daofeng Li 
GSM822275_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
2506 8c368a17 Daofeng Li 
GSM758576_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2507 8c368a17 Daofeng Li 
GSM973664_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2508 8c368a17 Daofeng Li 
GSM733667_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
2509 8c368a17 Daofeng Li 
GSM733731_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
2510 8c368a17 Daofeng Li 
GSM935588_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2511 8c368a17 Daofeng Li 
GSM803376_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2512 8c368a17 Daofeng Li 
GSM977052_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2513 8c368a17 Daofeng Li 
GSM897081_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2514 8c368a17 Daofeng Li 
GSM945164_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2515 8c368a17 Daofeng Li 
GSM945317_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2516 8c368a17 Daofeng Li 
GSM736578_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
2517 8c368a17 Daofeng Li 
GSM864340_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
2518 8c368a17 Daofeng Li 
GSM923446_6	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
2519 8c368a17 Daofeng Li 
GSM767839_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2520 8c368a17 Daofeng Li 
GSM973671_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2521 8c368a17 Daofeng Li 
GSM935281_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2522 8c368a17 Daofeng Li 
GSM935490_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2523 8c368a17 Daofeng Li 
GSM973663_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2524 8c368a17 Daofeng Li 
GSM831036_1	Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters.  Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)).  Reads were extended to 200 bp using the -e parameter, otherwise defaults were used.  The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp.
2525 8c368a17 Daofeng Li 
GSM945190_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2526 8c368a17 Daofeng Li 
GSM767838_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2527 8c368a17 Daofeng Li 
GSM935527_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2528 8c368a17 Daofeng Li 
GSM935509_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2529 8c368a17 Daofeng Li 
GSM897085_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2530 8c368a17 Daofeng Li 
GSM607494_1	Alignment=Sequence reads were obtained and mapped to the human genome assembly hg18 (March, 2006) or hg19 (February, 2009) using the Illumina Genome Analyzer Pipeline. All reads mapping with two or fewer mismatches were retained and read starts were summed in sliding windows of 400 bp to create summary windows.; Peak Calling=Peaks were called with Sole-Search (http://chipseq.genomecenter.ucdavis.edu/cgi-bin/chipseq.cgi)
2531 8c368a17 Daofeng Li 
GSM672833_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaSeq
2532 8c368a17 Daofeng Li 
GSM945216_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2533 8c368a17 Daofeng Li 
GSM945178_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2534 8c368a17 Daofeng Li 
GSM935495_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2535 8c368a17 Daofeng Li 
GSM923453_7	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
2536 8c368a17 Daofeng Li 
GSM923445_7	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
2537 8c368a17 Daofeng Li 
GSM935643_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2538 8c368a17 Daofeng Li 
GSM935301_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2539 8c368a17 Daofeng Li 
GSM803351_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2540 8c368a17 Daofeng Li 
GSM849030_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
2541 8c368a17 Daofeng Li 
GSM945249_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2542 8c368a17 Daofeng Li 
GSM945200_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2543 8c368a17 Daofeng Li 
GSM831017_1	Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters.  Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)).  Reads were extended to 200 bp using the -e parameter, otherwise defaults were used.  The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp.
2544 8c368a17 Daofeng Li 
GSM849353_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
2545 8c368a17 Daofeng Li 
GSM803452_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2546 8c368a17 Daofeng Li 
GSM758561_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2547 8c368a17 Daofeng Li 
GSM749719_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
2548 8c368a17 Daofeng Li 
GSM817344_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2549 8c368a17 Daofeng Li 
GSM977052_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2550 8c368a17 Daofeng Li 
GSM935594_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2551 8c368a17 Daofeng Li 
GSM736574_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
2552 8c368a17 Daofeng Li 
GSM935465_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2553 8c368a17 Daofeng Li 
GSM849359_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
2554 8c368a17 Daofeng Li 
GSM849366_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
2555 8c368a17 Daofeng Li 
GSM840138_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2556 8c368a17 Daofeng Li 
GSM935558_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2557 8c368a17 Daofeng Li 
GSM605628_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2558 8c368a17 Daofeng Li 
GSM605635_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2559 8c368a17 Daofeng Li 
GSM935299_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2560 8c368a17 Daofeng Li 
GSM749747_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
2561 8c368a17 Daofeng Li 
GSM605632_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2562 8c368a17 Daofeng Li 
GSM923452_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
2563 8c368a17 Daofeng Li 
GSM935562_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2564 8c368a17 Daofeng Li 
GSM733640_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
2565 8c368a17 Daofeng Li 
GSM923453_5	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
2566 8c368a17 Daofeng Li 
GSM733655_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
2567 8c368a17 Daofeng Li 
GSM935321_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2568 8c368a17 Daofeng Li 
GSM840136_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2569 8c368a17 Daofeng Li 
GSM923445_5	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
2570 8c368a17 Daofeng Li 
GSM733703_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
2571 8c368a17 Daofeng Li 
GSM935448_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2572 8c368a17 Daofeng Li 
GSM945273_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2573 8c368a17 Daofeng Li 
GSM736498_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
2574 8c368a17 Daofeng Li 
GSM849361_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
2575 8c368a17 Daofeng Li 
GSM944525_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSunyRipSeq
2576 8c368a17 Daofeng Li 
GSM935422_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2577 8c368a17 Daofeng Li 
GSM733744_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
2578 8c368a17 Daofeng Li 
GSM733710_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
2579 8c368a17 Daofeng Li 
GSM803502_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2580 8c368a17 Daofeng Li 
GSM923444_13	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
2581 8c368a17 Daofeng Li 
GSM736503_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
2582 8c368a17 Daofeng Li 
GSM733746_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
2583 8c368a17 Daofeng Li 
GSM849343_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
2584 8c368a17 Daofeng Li 
GSM935298_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2585 8c368a17 Daofeng Li 
GSM973661_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2586 8c368a17 Daofeng Li 
GSM935324_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2587 8c368a17 Daofeng Li 
GSM935386_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2588 8c368a17 Daofeng Li 
GSM935310_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2589 8c368a17 Daofeng Li 
GSM803539_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2590 8c368a17 Daofeng Li 
GSM736562_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
2591 8c368a17 Daofeng Li 
GSM935424_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2592 8c368a17 Daofeng Li 
GSM765388_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2593 8c368a17 Daofeng Li 
GSM935294_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2594 8c368a17 Daofeng Li 
GSM945209_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2595 8c368a17 Daofeng Li 
GSM831009_1	Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters.  Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)).  Reads were extended to 200 bp using the -e parameter, otherwise defaults were used.  The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp.
2596 8c368a17 Daofeng Li 
GSM736607_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
2597 8c368a17 Daofeng Li 
GSM935507_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2598 8c368a17 Daofeng Li 
GSM849335_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
2599 8c368a17 Daofeng Li 
GSM945230_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2600 8c368a17 Daofeng Li 
GSM849338_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
2601 8c368a17 Daofeng Li 
GSM923448_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
2602 8c368a17 Daofeng Li 
GSM864350_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
2603 8c368a17 Daofeng Li 
GSM958731_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq
2604 8c368a17 Daofeng Li 
GSM935396_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2605 8c368a17 Daofeng Li 
GSM977037_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2606 8c368a17 Daofeng Li 
GSM935440_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2607 8c368a17 Daofeng Li 
GSM736506_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
2608 8c368a17 Daofeng Li 
GSM788076_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhHistone
2609 8c368a17 Daofeng Li 
GSM822271_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
2610 8c368a17 Daofeng Li 
GSM822288_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
2611 8c368a17 Daofeng Li 
GSM822290_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
2612 8c368a17 Daofeng Li 
GSM864356_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
2613 8c368a17 Daofeng Li 
GSM977041_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2614 8c368a17 Daofeng Li 
GSM935516_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2615 8c368a17 Daofeng Li 
GSM945210_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2616 8c368a17 Daofeng Li 
GSM767845_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2617 8c368a17 Daofeng Li 
GSM935484_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2618 8c368a17 Daofeng Li 
GSM864352_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
2619 8c368a17 Daofeng Li 
GSM803356_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2620 8c368a17 Daofeng Li 
GSM945306_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2621 8c368a17 Daofeng Li 
GSM605633_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2622 8c368a17 Daofeng Li 
GSM935543_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2623 8c368a17 Daofeng Li 
GSM830519_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
2624 8c368a17 Daofeng Li 
GSM849353_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
2625 8c368a17 Daofeng Li 
GSM977030_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2626 8c368a17 Daofeng Li 
GSM816643_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
2627 8c368a17 Daofeng Li 
GSM849363_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
2628 8c368a17 Daofeng Li 
GSM822279_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
2629 8c368a17 Daofeng Li 
GSM897084_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2630 8c368a17 Daofeng Li 
GSM788087_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhHistone
2631 8c368a17 Daofeng Li 
GSM749710_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
2632 8c368a17 Daofeng Li 
GSM840138_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2633 8c368a17 Daofeng Li 
GSM847566_1	Software=Bowtie, Cufflinks
2634 8c368a17 Daofeng Li 
GSM945207_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2635 8c368a17 Daofeng Li 
GSM897084_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2636 8c368a17 Daofeng Li 
GSM923451_5	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
2637 8c368a17 Daofeng Li 
GSM803505_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2638 8c368a17 Daofeng Li 
GSM935498_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2639 8c368a17 Daofeng Li 
GSM945323_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2640 8c368a17 Daofeng Li 
GSM831008_1	Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters.  Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)).  Reads were extended to 200 bp using the -e parameter, otherwise defaults were used.  The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp.
2641 8c368a17 Daofeng Li 
GSM923436_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq
2642 8c368a17 Daofeng Li 
GSM973682_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2643 8c368a17 Daofeng Li 
GSM864337_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
2644 8c368a17 Daofeng Li 
GSM736496_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
2645 8c368a17 Daofeng Li 
GSM803487_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2646 8c368a17 Daofeng Li 
GSM758567_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2647 8c368a17 Daofeng Li 
GSM816639_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
2648 8c368a17 Daofeng Li 
GSM945295_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2649 8c368a17 Daofeng Li 
GSM923445_8	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
2650 8c368a17 Daofeng Li 
GSM923453_8	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
2651 8c368a17 Daofeng Li 
GSM733645_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
2652 8c368a17 Daofeng Li 
GSM736637_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
2653 8c368a17 Daofeng Li 
GSM923443_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
2654 8c368a17 Daofeng Li 
GSM803534_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2655 8c368a17 Daofeng Li 
GSM646561_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
2656 8c368a17 Daofeng Li 
GSM736570_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
2657 8c368a17 Daofeng Li 
GSM803351_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2658 8c368a17 Daofeng Li 
GSM803420_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2659 8c368a17 Daofeng Li 
GSM803432_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2660 8c368a17 Daofeng Li 
GSM945161_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2661 8c368a17 Daofeng Li 
GSM935443_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2662 8c368a17 Daofeng Li 
GSM935640_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2663 8c368a17 Daofeng Li 
GSM973661_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2664 8c368a17 Daofeng Li 
GSM977048_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2665 8c368a17 Daofeng Li 
GSM935276_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2666 8c368a17 Daofeng Li 
GSM935334_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2667 8c368a17 Daofeng Li 
GSM777641_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUchicagoTfbs
2668 8c368a17 Daofeng Li 
GSM935491_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2669 8c368a17 Daofeng Li 
GSM923448_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
2670 8c368a17 Daofeng Li 
GSM864359_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
2671 8c368a17 Daofeng Li 
GSM736618_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
2672 8c368a17 Daofeng Li 
GSM864360_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
2673 8c368a17 Daofeng Li 
GSM935648_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2674 8c368a17 Daofeng Li 
GSM765389_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2675 8c368a17 Daofeng Li 
GSM945201_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2676 8c368a17 Daofeng Li 
GSM923450_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
2677 8c368a17 Daofeng Li 
GSM803355_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2678 8c368a17 Daofeng Li 
GSM733722_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
2679 8c368a17 Daofeng Li 
GSM977039_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2680 8c368a17 Daofeng Li 
GSM822300_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
2681 8c368a17 Daofeng Li 
GSM973685_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2682 8c368a17 Daofeng Li 
GSM897074_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2683 8c368a17 Daofeng Li 
GSM803342_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2684 8c368a17 Daofeng Li 
GSM733652_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
2685 8c368a17 Daofeng Li 
GSM935357_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2686 8c368a17 Daofeng Li 
GSM935617_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2687 8c368a17 Daofeng Li 
GSM897083_8	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2688 8c368a17 Daofeng Li 
GSM935481_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2689 8c368a17 Daofeng Li 
GSM977031_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2690 8c368a17 Daofeng Li 
GSM736598_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
2691 8c368a17 Daofeng Li 
GSM923424_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq
2692 8c368a17 Daofeng Li 
GSM935600_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2693 8c368a17 Daofeng Li 
GSM945205_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2694 8c368a17 Daofeng Li 
GSM935293_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2695 8c368a17 Daofeng Li 
GSM923444_10	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
2696 8c368a17 Daofeng Li 
GSM973680_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2697 8c368a17 Daofeng Li 
GSM945294_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2698 8c368a17 Daofeng Li 
GSM849331_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
2699 8c368a17 Daofeng Li 
GSM935452_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2700 8c368a17 Daofeng Li 
GSM736512_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
2701 8c368a17 Daofeng Li 
GSM897076_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2702 8c368a17 Daofeng Li 
GSM923446_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
2703 8c368a17 Daofeng Li 
GSM830528_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
2704 8c368a17 Daofeng Li 
GSM935595_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2705 8c368a17 Daofeng Li 
GSM945225_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2706 8c368a17 Daofeng Li 
GSM733675_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
2707 8c368a17 Daofeng Li 
GSM935362_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2708 8c368a17 Daofeng Li 
GSM803495_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2709 8c368a17 Daofeng Li 
GSM782124_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2710 8c368a17 Daofeng Li 
GSM864352_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
2711 8c368a17 Daofeng Li 
GSM765401_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2712 8c368a17 Daofeng Li 
GSM765392_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2713 8c368a17 Daofeng Li 
GSM816641_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
2714 8c368a17 Daofeng Li 
GSM830991_1	Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters.  Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)).  Reads were extended to 200 bp using the -e parameter, otherwise defaults were used.  The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp.
2715 8c368a17 Daofeng Li 
GSM803394_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2716 8c368a17 Daofeng Li 
GSM935500_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2717 8c368a17 Daofeng Li 
GSM935285_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2718 8c368a17 Daofeng Li 
GSM935463_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2719 8c368a17 Daofeng Li 
GSM816668_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
2720 8c368a17 Daofeng Li 
GSM849342_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
2721 8c368a17 Daofeng Li 
GSM765401_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2722 8c368a17 Daofeng Li 
GSM736587_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
2723 8c368a17 Daofeng Li 
GSM945326_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2724 8c368a17 Daofeng Li 
GSM849338_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
2725 8c368a17 Daofeng Li 
GSM958748_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq
2726 8c368a17 Daofeng Li 
GSM765391_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2727 8c368a17 Daofeng Li 
GSM973685_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2728 8c368a17 Daofeng Li 
GSM803457_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2729 8c368a17 Daofeng Li 
GSM803434_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2730 8c368a17 Daofeng Li 
GSM944523_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSunyRipSeq
2731 8c368a17 Daofeng Li 
GSM935539_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2732 8c368a17 Daofeng Li 
GSM758565_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2733 8c368a17 Daofeng Li 
GSM830522_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
2734 8c368a17 Daofeng Li 
GSM816661_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
2735 8c368a17 Daofeng Li 
GSM803398_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2736 8c368a17 Daofeng Li 
GSM935282_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2737 8c368a17 Daofeng Li 
GSM733709_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
2738 8c368a17 Daofeng Li 
GSM822292_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
2739 8c368a17 Daofeng Li 
GSM749717_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
2740 8c368a17 Daofeng Li 
GSM733730_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
2741 8c368a17 Daofeng Li 
GSM822310_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
2742 8c368a17 Daofeng Li 
GSM733677_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
2743 8c368a17 Daofeng Li 
GSM945325_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2744 8c368a17 Daofeng Li 
GSM935441_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2745 8c368a17 Daofeng Li 
GSM935382_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2746 8c368a17 Daofeng Li 
GSM749740_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
2747 8c368a17 Daofeng Li 
GSM923445_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
2748 8c368a17 Daofeng Li 
GSM923453_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
2749 8c368a17 Daofeng Li 
GSM923447_7	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
2750 8c368a17 Daofeng Li 
GSM777644_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUchicagoTfbs
2751 8c368a17 Daofeng Li 
GSM945195_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2752 8c368a17 Daofeng Li 
GSM945305_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2753 8c368a17 Daofeng Li 
GSM935565_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2754 8c368a17 Daofeng Li 
GSM803508_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2755 8c368a17 Daofeng Li 
GSM923439_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
2756 8c368a17 Daofeng Li 
GSM749775_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
2757 8c368a17 Daofeng Li 
GSM945242_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2758 8c368a17 Daofeng Li 
GSM803438_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2759 8c368a17 Daofeng Li 
GSM944526_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSunyRipSeq
2760 8c368a17 Daofeng Li 
GSM897073_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2761 8c368a17 Daofeng Li 
GSM830530_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
2762 8c368a17 Daofeng Li 
GSM736604_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
2763 8c368a17 Daofeng Li 
GSM822281_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
2764 8c368a17 Daofeng Li 
GSM803365_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2765 8c368a17 Daofeng Li 
GSM803431_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2766 8c368a17 Daofeng Li 
GSM803456_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2767 8c368a17 Daofeng Li 
GSM864349_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
2768 8c368a17 Daofeng Li 
GSM765403_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2769 8c368a17 Daofeng Li 
GSM803454_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2770 8c368a17 Daofeng Li 
GSM945176_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2771 8c368a17 Daofeng Li 
GSM973664_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2772 8c368a17 Daofeng Li 
GSM777637_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUchicagoTfbs
2773 8c368a17 Daofeng Li 
GSM958735_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq
2774 8c368a17 Daofeng Li 
GSM935278_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2775 8c368a17 Daofeng Li 
GSM831016_1	Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters.  Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)).  Reads were extended to 200 bp using the -e parameter, otherwise defaults were used.  The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp.
2776 8c368a17 Daofeng Li 
GSM733642_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
2777 8c368a17 Daofeng Li 
GSM733669_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
2778 8c368a17 Daofeng Li 
GSM935288_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2779 8c368a17 Daofeng Li 
GSM736548_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
2780 8c368a17 Daofeng Li 
GSM849300_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
2781 8c368a17 Daofeng Li 
GSM849337_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
2782 8c368a17 Daofeng Li 
GSM803357_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2783 8c368a17 Daofeng Li 
GSM749751_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
2784 8c368a17 Daofeng Li 
GSM816664_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
2785 8c368a17 Daofeng Li 
GSM822284_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
2786 8c368a17 Daofeng Li 
GSM977039_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2787 8c368a17 Daofeng Li 
GSM758566_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2788 8c368a17 Daofeng Li 
GSM749760_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
2789 8c368a17 Daofeng Li 
GSM803523_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2790 8c368a17 Daofeng Li 
GSM803422_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2791 8c368a17 Daofeng Li 
GSM733713_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
2792 8c368a17 Daofeng Li 
GSM864348_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
2793 8c368a17 Daofeng Li 
GSM822297_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
2794 8c368a17 Daofeng Li 
GSM958740_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq
2795 8c368a17 Daofeng Li 
GSM973662_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2796 8c368a17 Daofeng Li 
GSM749749_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
2797 8c368a17 Daofeng Li 
GSM733693_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
2798 8c368a17 Daofeng Li 
GSM733666_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
2799 8c368a17 Daofeng Li 
GSM973676_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2800 8c368a17 Daofeng Li 
GSM803421_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2801 8c368a17 Daofeng Li 
GSM733698_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
2802 8c368a17 Daofeng Li 
GSM935581_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2803 8c368a17 Daofeng Li 
GSM935290_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2804 8c368a17 Daofeng Li 
GSM749709_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
2805 8c368a17 Daofeng Li 
GSM945179_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2806 8c368a17 Daofeng Li 
GSM733740_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
2807 8c368a17 Daofeng Li 
GSM897083_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2808 8c368a17 Daofeng Li 
GSM897085_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2809 8c368a17 Daofeng Li 
GSM803421_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2810 8c368a17 Daofeng Li 
GSM935425_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2811 8c368a17 Daofeng Li 
GSM849364_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
2812 8c368a17 Daofeng Li 
GSM945293_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2813 8c368a17 Daofeng Li 
GSM803368_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2814 8c368a17 Daofeng Li 
GSM830997_1	Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters.  Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)).  Reads were extended to 200 bp using the -e parameter, otherwise defaults were used.  The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp.
2815 8c368a17 Daofeng Li 
GSM767852_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2816 8c368a17 Daofeng Li 
GSM864353_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
2817 8c368a17 Daofeng Li 
GSM767844_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2818 8c368a17 Daofeng Li 
GSM935439_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2819 8c368a17 Daofeng Li 
GSM935375_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2820 8c368a17 Daofeng Li 
GSM831026_1	Alignment=Sequence reads were aligned to the human genome reference (hg19) using MAQ version 0.7.1 (Li et al., 2008, Genome Research 18, 1851-1858) with default parameters.  Reads mapping to multiple positions in the genome were placed randomly at one of those locations.; Read Density Maps= BAM files were processed to WIG format using the 'count' command of igvtools (http://www.broadinstitute.org/igv/igvtools -- Robinson, et al. Integrative Genomics Viewer. Nature Biotechnology 29, 24-26 (2011)).  Reads were extended to 200 bp using the -e parameter, otherwise defaults were used.  The WIG files were then processed to BIGWIG format using the UCSC wigToBigWig utility (available here=http://hgdownload.cse.ucsc.edu/admin/exe/) with the -clip option specified.; Peak calling=Enriched intervals (binding sites) were identified using QuEST (Valouev et al., 2008, Nature methods 5, 829-834) and MACS (Zhang et al., 2008, Genome biology 9, R137). A control dataset derived by sequencing of at least two un-enriched input DNA samples (whole cell extract, WCE) was used to define a background model for binding assessment. These procedures yielded a list of enriched intervals for each CR, together with an estimate of statistical significance. As a first step, we retained all peaks with p < 10-8 or estimated FDR below 5%. We then applied a post-processing step, consolidating all the peaks called by the two algorithms, as described previously (Novershtern et al., 2011, Cell 144, 296-309). We call a peak only if it was found by either one method in at least two replicate ChIP-seq experiments, or by both methods in at least one replicate. We considered peaks to be overlapping if they are within a distance of 50bp.
2821 8c368a17 Daofeng Li 
GSM803471_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2822 8c368a17 Daofeng Li 
GSM765398_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2823 8c368a17 Daofeng Li 
GSM935348_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2824 8c368a17 Daofeng Li 
GSM736523_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
2825 8c368a17 Daofeng Li 
GSM973683_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2826 8c368a17 Daofeng Li 
GSM822288_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
2827 8c368a17 Daofeng Li 
GSM830536_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
2828 8c368a17 Daofeng Li 
GSM935651_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2829 8c368a17 Daofeng Li 
GSM803469_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2830 8c368a17 Daofeng Li 
GSM736561_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
2831 8c368a17 Daofeng Li 
GSM977037_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2832 8c368a17 Daofeng Li 
GSM767857_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2833 8c368a17 Daofeng Li 
GSM733684_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
2834 8c368a17 Daofeng Li 
GSM733691_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
2835 8c368a17 Daofeng Li 
GSM672835_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaSeq
2836 8c368a17 Daofeng Li 
GSM923451_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
2837 8c368a17 Daofeng Li 
GSM607492_1	Alignment=Sequence reads were obtained and mapped to the human genome assembly hg18 (March, 2006) or hg19 (February, 2009) using the Illumina Genome Analyzer Pipeline. All reads mapping with two or fewer mismatches were retained and read starts were summed in sliding windows of 400 bp to create summary windows.; Peak Calling=Peaks were called with Sole-Search (http://chipseq.genomecenter.ucdavis.edu/cgi-bin/chipseq.cgi)
2838 8c368a17 Daofeng Li 
GSM767852_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2839 8c368a17 Daofeng Li 
GSM935327_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2840 8c368a17 Daofeng Li 
GSM973676_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2841 8c368a17 Daofeng Li 
GSM849334_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
2842 8c368a17 Daofeng Li 
GSM935549_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2843 8c368a17 Daofeng Li 
GSM749724_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
2844 8c368a17 Daofeng Li 
GSM935492_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2845 8c368a17 Daofeng Li 
GSM749672_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
2846 8c368a17 Daofeng Li 
GSM923422_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq
2847 8c368a17 Daofeng Li 
GSM945301_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2848 8c368a17 Daofeng Li 
GSM849356_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
2849 8c368a17 Daofeng Li 
GSM849300_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
2850 8c368a17 Daofeng Li 
GSM803374_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2851 8c368a17 Daofeng Li 
GSM749705_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
2852 8c368a17 Daofeng Li 
GSM945183_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2853 8c368a17 Daofeng Li 
GSM803509_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2854 8c368a17 Daofeng Li 
GSM935540_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2855 8c368a17 Daofeng Li 
GSM973671_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2856 8c368a17 Daofeng Li 
GSM830530_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
2857 8c368a17 Daofeng Li 
GSM803537_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2858 8c368a17 Daofeng Li 
GSM945191_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2859 8c368a17 Daofeng Li 
GSM803390_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2860 8c368a17 Daofeng Li 
GSM803429_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2861 8c368a17 Daofeng Li 
GSM605634_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2862 8c368a17 Daofeng Li 
GSM803334_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2863 8c368a17 Daofeng Li 
GSM945304_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2864 8c368a17 Daofeng Li 
GSM945241_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2865 8c368a17 Daofeng Li 
GSM944520_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSunyRipSeq
2866 8c368a17 Daofeng Li 
GSM945177_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2867 8c368a17 Daofeng Li 
GSM849302_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
2868 8c368a17 Daofeng Li 
GSM935354_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2869 8c368a17 Daofeng Li 
GSM605626_1	hg18=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg18&g=wgEncodeCshlShortRnaSeq; hg19=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2870 8c368a17 Daofeng Li 
GSM973671_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2871 8c368a17 Daofeng Li 
GSM935535_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2872 8c368a17 Daofeng Li 
GSM977034_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2873 8c368a17 Daofeng Li 
GSM923441_6	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
2874 8c368a17 Daofeng Li 
GSM803379_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2875 8c368a17 Daofeng Li 
GSM733705_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
2876 8c368a17 Daofeng Li 
GSM736615_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
2877 8c368a17 Daofeng Li 
GSM733678_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
2878 8c368a17 Daofeng Li 
GSM849355_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
2879 8c368a17 Daofeng Li 
GSM816653_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
2880 8c368a17 Daofeng Li 
GSM765390_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2881 8c368a17 Daofeng Li 
GSM973676_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2882 8c368a17 Daofeng Li 
GSM945202_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2883 8c368a17 Daofeng Li 
GSM945312_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2884 8c368a17 Daofeng Li 
GSM749676_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
2885 8c368a17 Daofeng Li 
GSM977038_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2886 8c368a17 Daofeng Li 
GSM803456_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2887 8c368a17 Daofeng Li 
GSM935603_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2888 8c368a17 Daofeng Li 
GSM935341_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2889 8c368a17 Daofeng Li 
GSM736564_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
2890 8c368a17 Daofeng Li 
GSM935315_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2891 8c368a17 Daofeng Li 
GSM977044_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2892 8c368a17 Daofeng Li 
GSM897077_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2893 8c368a17 Daofeng Li 
GSM803372_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2894 8c368a17 Daofeng Li 
GSM973666_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2895 8c368a17 Daofeng Li 
GSM758576_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2896 8c368a17 Daofeng Li 
GSM973675_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2897 8c368a17 Daofeng Li 
GSM736597_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
2898 8c368a17 Daofeng Li 
GSM945190_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2899 8c368a17 Daofeng Li 
GSM973668_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2900 8c368a17 Daofeng Li 
GSM758560_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2901 8c368a17 Daofeng Li 
GSM923420_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq
2902 8c368a17 Daofeng Li 
GSM816670_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
2903 8c368a17 Daofeng Li 
GSM733683_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
2904 8c368a17 Daofeng Li 
GSM733717_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
2905 8c368a17 Daofeng Li 
GSM944525_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSunyRipSeq
2906 8c368a17 Daofeng Li 
GSM816652_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
2907 8c368a17 Daofeng Li 
GSM923428_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq
2908 8c368a17 Daofeng Li 
GSM977031_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2909 8c368a17 Daofeng Li 
GSM923446_7	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwRepliSeq
2910 8c368a17 Daofeng Li 
GSM945234_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2911 8c368a17 Daofeng Li 
GSM758561_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2912 8c368a17 Daofeng Li 
GSM758578_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2913 8c368a17 Daofeng Li 
GSM935412_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2914 8c368a17 Daofeng Li 
GSM958729_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq
2915 8c368a17 Daofeng Li 
GSM958736_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCaltechRnaSeq
2916 8c368a17 Daofeng Li 
GSM733699_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
2917 8c368a17 Daofeng Li 
GSM945199_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
2918 8c368a17 Daofeng Li 
GSM923431_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibRnaSeq
2919 8c368a17 Daofeng Li 
GSM973664_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2920 8c368a17 Daofeng Li 
GSM973671_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlShortRnaSeq
2921 8c368a17 Daofeng Li 
GSM767852_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2922 8c368a17 Daofeng Li 
GSM935479_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
2923 8c368a17 Daofeng Li 
GSM1022646_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
2924 8c368a17 Daofeng Li 
GSM1003558_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
2925 8c368a17 Daofeng Li 
GSM1011128_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
2926 8c368a17 Daofeng Li 
GSM1008564_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
2927 8c368a17 Daofeng Li 
GSM1024769_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
2928 8c368a17 Daofeng Li 
GSM979655_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
2929 8c368a17 Daofeng Li 
GSM979651_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
2930 8c368a17 Daofeng Li 
GSM979656_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
2931 8c368a17 Daofeng Li 
GSM1024760_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
2932 8c368a17 Daofeng Li 
GSM1014516_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
2933 8c368a17 Daofeng Li 
GSM1008584_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
2934 8c368a17 Daofeng Li 
GSM1010896_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2935 8c368a17 Daofeng Li 
GSM1014538_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
2936 8c368a17 Daofeng Li 
GSM981252_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2937 8c368a17 Daofeng Li 
GSM981254_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2938 8c368a17 Daofeng Li 
GSM1010776_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2939 8c368a17 Daofeng Li 
GSM984610_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2940 8c368a17 Daofeng Li 
GSM1014527_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
2941 8c368a17 Daofeng Li 
GSM981253_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2942 8c368a17 Daofeng Li 
GSM984619_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2943 8c368a17 Daofeng Li 
GSM979642_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
2944 8c368a17 Daofeng Li 
GSM1010774_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2945 8c368a17 Daofeng Li 
GSM1010740_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2946 8c368a17 Daofeng Li 
GSM979655_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
2947 8c368a17 Daofeng Li 
GSM1003555_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
2948 8c368a17 Daofeng Li 
GSM1010881_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2949 8c368a17 Daofeng Li 
GSM1010903_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2950 8c368a17 Daofeng Li 
GSM1010744_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2951 8c368a17 Daofeng Li 
GSM1024755_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
2952 8c368a17 Daofeng Li 
GSM1010828_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2953 8c368a17 Daofeng Li 
GSM1003517_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
2954 8c368a17 Daofeng Li 
GSM1006911_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
2955 8c368a17 Daofeng Li 
GSM981253_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2956 8c368a17 Daofeng Li 
GSM1010759_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2957 8c368a17 Daofeng Li 
GSM1006911_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
2958 8c368a17 Daofeng Li 
GSM981248_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2959 8c368a17 Daofeng Li 
GSM979632_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
2960 8c368a17 Daofeng Li 
GSM979638_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
2961 8c368a17 Daofeng Li 
GSM979660_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
2962 8c368a17 Daofeng Li 
GSM1010855_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2963 8c368a17 Daofeng Li 
GSM1006874_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
2964 8c368a17 Daofeng Li 
GSM1006891_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
2965 8c368a17 Daofeng Li 
GSM981250_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2966 8c368a17 Daofeng Li 
GSM1010766_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2967 8c368a17 Daofeng Li 
GSM1010858_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2968 8c368a17 Daofeng Li 
GSM1010861_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2969 8c368a17 Daofeng Li 
GSM1003468_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
2970 8c368a17 Daofeng Li 
GSM1010816_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2971 8c368a17 Daofeng Li 
GSM1003487_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
2972 8c368a17 Daofeng Li 
GSM1010787_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2973 8c368a17 Daofeng Li 
GSM984616_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2974 8c368a17 Daofeng Li 
GSM981259_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2975 8c368a17 Daofeng Li 
GSM1014520_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
2976 8c368a17 Daofeng Li 
GSM1003506_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
2977 8c368a17 Daofeng Li 
GSM981245_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2978 8c368a17 Daofeng Li 
GSM1010836_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2979 8c368a17 Daofeng Li 
GSM984612_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2980 8c368a17 Daofeng Li 
GSM1010726_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2981 8c368a17 Daofeng Li 
GSM981248_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
2982 8c368a17 Daofeng Li 
GSM1003457_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
2983 8c368a17 Daofeng Li 
GSM1022657_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
2984 8c368a17 Daofeng Li 
GSM1003570_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
2985 8c368a17 Daofeng Li 
GSM1010780_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2986 8c368a17 Daofeng Li 
GSM979652_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
2987 8c368a17 Daofeng Li 
GSM1014530_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
2988 8c368a17 Daofeng Li 
GSM1010837_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2989 8c368a17 Daofeng Li 
GSM1003474_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
2990 8c368a17 Daofeng Li 
GSM1010904_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2991 8c368a17 Daofeng Li 
GSM1008587_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
2992 8c368a17 Daofeng Li 
GSM1008578_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
2993 8c368a17 Daofeng Li 
GSM1008577_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
2994 8c368a17 Daofeng Li 
GSM1010769_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2995 8c368a17 Daofeng Li 
GSM979645_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
2996 8c368a17 Daofeng Li 
GSM1006870_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
2997 8c368a17 Daofeng Li 
GSM1010729_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
2998 8c368a17 Daofeng Li 
GSM979660_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
2999 8c368a17 Daofeng Li 
GSM1003495_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3000 8c368a17 Daofeng Li 
GSM1003559_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3001 8c368a17 Daofeng Li 
GSM1010849_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3002 8c368a17 Daofeng Li 
GSM1006880_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
3003 8c368a17 Daofeng Li 
GSM1003449_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3004 8c368a17 Daofeng Li 
GSM1003448_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3005 8c368a17 Daofeng Li 
GSM1003562_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3006 8c368a17 Daofeng Li 
GSM984608_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3007 8c368a17 Daofeng Li 
GSM1003557_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3008 8c368a17 Daofeng Li 
GSM979659_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3009 8c368a17 Daofeng Li 
GSM1003568_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3010 8c368a17 Daofeng Li 
GSM1024774_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
3011 8c368a17 Daofeng Li 
GSM1010754_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3012 8c368a17 Daofeng Li 
GSM979648_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3013 8c368a17 Daofeng Li 
GSM979654_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3014 8c368a17 Daofeng Li 
GSM1010754_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3015 8c368a17 Daofeng Li 
GSM1003501_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3016 8c368a17 Daofeng Li 
GSM981244_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3017 8c368a17 Daofeng Li 
GSM1014535_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
3018 8c368a17 Daofeng Li 
GSM1010753_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3019 8c368a17 Daofeng Li 
GSM1006883_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
3020 8c368a17 Daofeng Li 
GSM979659_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3021 8c368a17 Daofeng Li 
GSM984607_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3022 8c368a17 Daofeng Li 
GSM984617_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3023 8c368a17 Daofeng Li 
GSM1010865_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3024 8c368a17 Daofeng Li 
GSM1010810_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3025 8c368a17 Daofeng Li 
GSM1003563_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3026 8c368a17 Daofeng Li 
GSM1006907_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
3027 8c368a17 Daofeng Li 
GSM1010739_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3028 8c368a17 Daofeng Li 
GSM1024754_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
3029 8c368a17 Daofeng Li 
GSM979657_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3030 8c368a17 Daofeng Li 
GSM1003561_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3031 8c368a17 Daofeng Li 
GSM1010741_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3032 8c368a17 Daofeng Li 
GSM1010903_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3033 8c368a17 Daofeng Li 
GSM1010821_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3034 8c368a17 Daofeng Li 
GSM1003499_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3035 8c368a17 Daofeng Li 
GSM1010806_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3036 8c368a17 Daofeng Li 
GSM1008572_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3037 8c368a17 Daofeng Li 
GSM1010791_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3038 8c368a17 Daofeng Li 
GSM1010819_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3039 8c368a17 Daofeng Li 
GSM1010762_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3040 8c368a17 Daofeng Li 
GSM979652_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3041 8c368a17 Daofeng Li 
GSM1006913_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
3042 8c368a17 Daofeng Li 
GSM1010731_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3043 8c368a17 Daofeng Li 
GSM1010877_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3044 8c368a17 Daofeng Li 
GSM1008566_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3045 8c368a17 Daofeng Li 
GSM1010749_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3046 8c368a17 Daofeng Li 
GSM1008562_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3047 8c368a17 Daofeng Li 
GSM1010810_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3048 8c368a17 Daofeng Li 
GSM984612_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3049 8c368a17 Daofeng Li 
GSM1010870_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3050 8c368a17 Daofeng Li 
GSM1003519_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3051 8c368a17 Daofeng Li 
GSM1008570_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3052 8c368a17 Daofeng Li 
GSM979641_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3053 8c368a17 Daofeng Li 
GSM1009528_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
3054 8c368a17 Daofeng Li 
GSM1003471_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3055 8c368a17 Daofeng Li 
GSM984609_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3056 8c368a17 Daofeng Li 
GSM1024785_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
3057 8c368a17 Daofeng Li 
GSM1003518_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3058 8c368a17 Daofeng Li 
GSM1003534_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3059 8c368a17 Daofeng Li 
GSM1010906_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3060 8c368a17 Daofeng Li 
GSM1024753_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
3061 8c368a17 Daofeng Li 
GSM1008593_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3062 8c368a17 Daofeng Li 
GSM1022677_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
3063 8c368a17 Daofeng Li 
GSM1014511_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
3064 8c368a17 Daofeng Li 
GSM1006868_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
3065 8c368a17 Daofeng Li 
GSM1006902_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
3066 8c368a17 Daofeng Li 
GSM1003503_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3067 8c368a17 Daofeng Li 
GSM1010800_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3068 8c368a17 Daofeng Li 
GSM1008580_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3069 8c368a17 Daofeng Li 
GSM1010733_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3070 8c368a17 Daofeng Li 
GSM1008589_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3071 8c368a17 Daofeng Li 
GSM1024773_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
3072 8c368a17 Daofeng Li 
GSM1010756_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3073 8c368a17 Daofeng Li 
GSM1006875_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
3074 8c368a17 Daofeng Li 
GSM979661_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3075 8c368a17 Daofeng Li 
GSM1024784_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
3076 8c368a17 Daofeng Li 
GSM1003579_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3077 8c368a17 Daofeng Li 
GSM1014512_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
3078 8c368a17 Daofeng Li 
GSM1008605_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3079 8c368a17 Daofeng Li 
GSM1014518_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
3080 8c368a17 Daofeng Li 
GSM1003624_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
3081 8c368a17 Daofeng Li 
GSM1003456_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3082 8c368a17 Daofeng Li 
GSM1008556_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3083 8c368a17 Daofeng Li 
GSM1010752_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3084 8c368a17 Daofeng Li 
GSM979640_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3085 8c368a17 Daofeng Li 
GSM984604_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3086 8c368a17 Daofeng Li 
GSM1011130_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
3087 8c368a17 Daofeng Li 
GSM1003629_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
3088 8c368a17 Daofeng Li 
GSM1006906_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
3089 8c368a17 Daofeng Li 
GSM1022645_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
3090 8c368a17 Daofeng Li 
GSM1010854_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3091 8c368a17 Daofeng Li 
GSM981244_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3092 8c368a17 Daofeng Li 
GSM1010799_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3093 8c368a17 Daofeng Li 
GSM1008560_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3094 8c368a17 Daofeng Li 
GSM1006909_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
3095 8c368a17 Daofeng Li 
GSM1010883_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3096 8c368a17 Daofeng Li 
GSM984620_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3097 8c368a17 Daofeng Li 
GSM1010752_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3098 8c368a17 Daofeng Li 
GSM984618_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3099 8c368a17 Daofeng Li 
GSM1010814_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3100 8c368a17 Daofeng Li 
GSM979632_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3101 8c368a17 Daofeng Li 
GSM984617_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3102 8c368a17 Daofeng Li 
GSM1010848_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3103 8c368a17 Daofeng Li 
GSM1010745_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3104 8c368a17 Daofeng Li 
GSM1010767_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3105 8c368a17 Daofeng Li 
GSM1006903_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
3106 8c368a17 Daofeng Li 
GSM1011120_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
3107 8c368a17 Daofeng Li 
GSM1010722_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3108 8c368a17 Daofeng Li 
GSM1022640_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
3109 8c368a17 Daofeng Li 
GSM1010743_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3110 8c368a17 Daofeng Li 
GSM1003536_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3111 8c368a17 Daofeng Li 
GSM1003607_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
3112 8c368a17 Daofeng Li 
GSM979662_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3113 8c368a17 Daofeng Li 
GSM1003445_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3114 8c368a17 Daofeng Li 
GSM1010807_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3115 8c368a17 Daofeng Li 
GSM981243_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3116 8c368a17 Daofeng Li 
GSM1011126_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
3117 8c368a17 Daofeng Li 
GSM981255_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3118 8c368a17 Daofeng Li 
GSM1008556_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3119 8c368a17 Daofeng Li 
GSM979643_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3120 8c368a17 Daofeng Li 
GSM1006910_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
3121 8c368a17 Daofeng Li 
GSM1024746_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
3122 8c368a17 Daofeng Li 
GSM1024749_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
3123 8c368a17 Daofeng Li 
GSM1010827_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3124 8c368a17 Daofeng Li 
GSM984605_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3125 8c368a17 Daofeng Li 
GSM1008599_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3126 8c368a17 Daofeng Li 
GSM1003467_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3127 8c368a17 Daofeng Li 
GSM1006873_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
3128 8c368a17 Daofeng Li 
GSM1010832_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3129 8c368a17 Daofeng Li 
GSM1010794_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3130 8c368a17 Daofeng Li 
GSM1010772_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3131 8c368a17 Daofeng Li 
GSM1010815_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3132 8c368a17 Daofeng Li 
GSM1011119_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
3133 8c368a17 Daofeng Li 
GSM1022648_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
3134 8c368a17 Daofeng Li 
GSM979650_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3135 8c368a17 Daofeng Li 
GSM1008601_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3136 8c368a17 Daofeng Li 
GSM1008582_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3137 8c368a17 Daofeng Li 
GSM1003509_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3138 8c368a17 Daofeng Li 
GSM1010884_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3139 8c368a17 Daofeng Li 
GSM984606_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3140 8c368a17 Daofeng Li 
GSM1010842_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3141 8c368a17 Daofeng Li 
GSM981259_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3142 8c368a17 Daofeng Li 
GSM1008588_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3143 8c368a17 Daofeng Li 
GSM1010912_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
3144 8c368a17 Daofeng Li 
GSM1010736_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3145 8c368a17 Daofeng Li 
GSM1008569_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3146 8c368a17 Daofeng Li 
GSM1010824_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3147 8c368a17 Daofeng Li 
GSM1024745_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
3148 8c368a17 Daofeng Li 
GSM1010721_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3149 8c368a17 Daofeng Li 
GSM1006915_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
3150 8c368a17 Daofeng Li 
GSM1008597_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3151 8c368a17 Daofeng Li 
GSM1014515_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
3152 8c368a17 Daofeng Li 
GSM981247_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3153 8c368a17 Daofeng Li 
GSM1010862_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3154 8c368a17 Daofeng Li 
GSM1010784_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3155 8c368a17 Daofeng Li 
GSM1006893_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
3156 8c368a17 Daofeng Li 
GSM1010821_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3157 8c368a17 Daofeng Li 
GSM1010835_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3158 8c368a17 Daofeng Li 
GSM1011127_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
3159 8c368a17 Daofeng Li 
GSM1010735_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3160 8c368a17 Daofeng Li 
GSM1024763_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
3161 8c368a17 Daofeng Li 
GSM1010846_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3162 8c368a17 Daofeng Li 
GSM1006909_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
3163 8c368a17 Daofeng Li 
GSM1010782_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3164 8c368a17 Daofeng Li 
GSM1006912_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
3165 8c368a17 Daofeng Li 
GSM979647_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3166 8c368a17 Daofeng Li 
GSM1014534_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
3167 8c368a17 Daofeng Li 
GSM1003634_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
3168 8c368a17 Daofeng Li 
GSM1010898_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3169 8c368a17 Daofeng Li 
GSM1010817_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3170 8c368a17 Daofeng Li 
GSM1006891_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
3171 8c368a17 Daofeng Li 
GSM1010901_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3172 8c368a17 Daofeng Li 
GSM1003532_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3173 8c368a17 Daofeng Li 
GSM1010846_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3174 8c368a17 Daofeng Li 
GSM1014541_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
3175 8c368a17 Daofeng Li 
GSM1010769_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3176 8c368a17 Daofeng Li 
GSM1008559_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3177 8c368a17 Daofeng Li 
GSM979636_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3178 8c368a17 Daofeng Li 
GSM979658_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3179 8c368a17 Daofeng Li 
GSM1024757_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
3180 8c368a17 Daofeng Li 
GSM1022647_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
3181 8c368a17 Daofeng Li 
GSM984618_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3182 8c368a17 Daofeng Li 
GSM1006872_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
3183 8c368a17 Daofeng Li 
GSM1010875_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3184 8c368a17 Daofeng Li 
GSM1024772_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
3185 8c368a17 Daofeng Li 
GSM1006885_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
3186 8c368a17 Daofeng Li 
GSM1006904_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
3187 8c368a17 Daofeng Li 
GSM1003609_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
3188 8c368a17 Daofeng Li 
GSM979659_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3189 8c368a17 Daofeng Li 
GSM1022635_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
3190 8c368a17 Daofeng Li 
GSM1003582_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3191 8c368a17 Daofeng Li 
GSM979649_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3192 8c368a17 Daofeng Li 
GSM1003565_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3193 8c368a17 Daofeng Li 
GSM1008601_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3194 8c368a17 Daofeng Li 
GSM1003608_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
3195 8c368a17 Daofeng Li 
GSM1006905_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
3196 8c368a17 Daofeng Li 
GSM984613_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3197 8c368a17 Daofeng Li 
GSM1010804_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3198 8c368a17 Daofeng Li 
GSM1024789_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
3199 8c368a17 Daofeng Li 
GSM1010802_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3200 8c368a17 Daofeng Li 
GSM1010813_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3201 8c368a17 Daofeng Li 
GSM1010809_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3202 8c368a17 Daofeng Li 
GSM1011124_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
3203 8c368a17 Daofeng Li 
GSM981248_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3204 8c368a17 Daofeng Li 
GSM1010800_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3205 8c368a17 Daofeng Li 
GSM1010757_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3206 8c368a17 Daofeng Li 
GSM1008588_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3207 8c368a17 Daofeng Li 
GSM1006909_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
3208 8c368a17 Daofeng Li 
GSM1010766_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3209 8c368a17 Daofeng Li 
GSM1003459_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3210 8c368a17 Daofeng Li 
GSM979647_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3211 8c368a17 Daofeng Li 
GSM1022630_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
3212 8c368a17 Daofeng Li 
GSM979638_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3213 8c368a17 Daofeng Li 
GSM1010729_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3214 8c368a17 Daofeng Li 
GSM979649_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3215 8c368a17 Daofeng Li 
GSM1010899_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3216 8c368a17 Daofeng Li 
GSM1010829_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3217 8c368a17 Daofeng Li 
GSM984606_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3218 8c368a17 Daofeng Li 
GSM1008583_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3219 8c368a17 Daofeng Li 
GSM984613_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3220 8c368a17 Daofeng Li 
GSM979650_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3221 8c368a17 Daofeng Li 
GSM1010777_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3222 8c368a17 Daofeng Li 
GSM1010857_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3223 8c368a17 Daofeng Li 
GSM1010798_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3224 8c368a17 Daofeng Li 
GSM1022655_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
3225 8c368a17 Daofeng Li 
GSM979652_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3226 8c368a17 Daofeng Li 
GSM979632_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3227 8c368a17 Daofeng Li 
GSM1003530_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3228 8c368a17 Daofeng Li 
GSM984609_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3229 8c368a17 Daofeng Li 
GSM1010760_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3230 8c368a17 Daofeng Li 
GSM1008574_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3231 8c368a17 Daofeng Li 
GSM1010768_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3232 8c368a17 Daofeng Li 
GSM1003531_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3233 8c368a17 Daofeng Li 
GSM1006885_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
3234 8c368a17 Daofeng Li 
GSM1010801_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3235 8c368a17 Daofeng Li 
GSM1010755_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3236 8c368a17 Daofeng Li 
GSM1003526_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3237 8c368a17 Daofeng Li 
GSM984619_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3238 8c368a17 Daofeng Li 
GSM1003520_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3239 8c368a17 Daofeng Li 
GSM1008585_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3240 8c368a17 Daofeng Li 
GSM1010789_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3241 8c368a17 Daofeng Li 
GSM1010852_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3242 8c368a17 Daofeng Li 
GSM984616_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3243 8c368a17 Daofeng Li 
GSM981249_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3244 8c368a17 Daofeng Li 
GSM981251_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3245 8c368a17 Daofeng Li 
GSM1022634_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
3246 8c368a17 Daofeng Li 
GSM981245_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3247 8c368a17 Daofeng Li 
GSM984621_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3248 8c368a17 Daofeng Li 
GSM1010778_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3249 8c368a17 Daofeng Li 
GSM1010819_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3250 8c368a17 Daofeng Li 
GSM1014530_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
3251 8c368a17 Daofeng Li 
GSM979652_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3252 8c368a17 Daofeng Li 
GSM981260_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3253 8c368a17 Daofeng Li 
GSM1010735_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3254 8c368a17 Daofeng Li 
GSM979640_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3255 8c368a17 Daofeng Li 
GSM1022633_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
3256 8c368a17 Daofeng Li 
GSM979656_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3257 8c368a17 Daofeng Li 
GSM1006902_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
3258 8c368a17 Daofeng Li 
GSM1010737_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3259 8c368a17 Daofeng Li 
GSM979634_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3260 8c368a17 Daofeng Li 
GSM1010864_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3261 8c368a17 Daofeng Li 
GSM1003446_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3262 8c368a17 Daofeng Li 
GSM1024768_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
3263 8c368a17 Daofeng Li 
GSM1006915_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
3264 8c368a17 Daofeng Li 
GSM981255_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3265 8c368a17 Daofeng Li 
GSM1010892_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3266 8c368a17 Daofeng Li 
GSM1003533_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3267 8c368a17 Daofeng Li 
GSM1010845_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3268 8c368a17 Daofeng Li 
GSM1003444_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3269 8c368a17 Daofeng Li 
GSM1008578_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3270 8c368a17 Daofeng Li 
GSM1022644_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
3271 8c368a17 Daofeng Li 
GSM1011129_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
3272 8c368a17 Daofeng Li 
GSM1006890_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
3273 8c368a17 Daofeng Li 
GSM1003631_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
3274 8c368a17 Daofeng Li 
GSM979646_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3275 8c368a17 Daofeng Li 
GSM1014526_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
3276 8c368a17 Daofeng Li 
GSM1010731_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3277 8c368a17 Daofeng Li 
GSM1010749_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3278 8c368a17 Daofeng Li 
GSM1003617_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
3279 8c368a17 Daofeng Li 
GSM1010839_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3280 8c368a17 Daofeng Li 
GSM1024766_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
3281 8c368a17 Daofeng Li 
GSM979654_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3282 8c368a17 Daofeng Li 
GSM1014515_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
3283 8c368a17 Daofeng Li 
GSM984615_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3284 8c368a17 Daofeng Li 
GSM1014533_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
3285 8c368a17 Daofeng Li 
GSM1010734_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3286 8c368a17 Daofeng Li 
GSM1010753_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3287 8c368a17 Daofeng Li 
GSM1010838_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3288 8c368a17 Daofeng Li 
GSM1010863_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3289 8c368a17 Daofeng Li 
GSM1010746_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3290 8c368a17 Daofeng Li 
GSM979646_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3291 8c368a17 Daofeng Li 
GSM1010745_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3292 8c368a17 Daofeng Li 
GSM1010763_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3293 8c368a17 Daofeng Li 
GSM1008591_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3294 8c368a17 Daofeng Li 
GSM1003541_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3295 8c368a17 Daofeng Li 
GSM1010854_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3296 8c368a17 Daofeng Li 
GSM979648_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3297 8c368a17 Daofeng Li 
GSM1010868_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3298 8c368a17 Daofeng Li 
GSM1008581_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3299 8c368a17 Daofeng Li 
GSM1024795_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
3300 8c368a17 Daofeng Li 
GSM979656_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3301 8c368a17 Daofeng Li 
GSM1014535_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
3302 8c368a17 Daofeng Li 
GSM1006908_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
3303 8c368a17 Daofeng Li 
GSM1010799_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3304 8c368a17 Daofeng Li 
GSM979663_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3305 8c368a17 Daofeng Li 
GSM1008568_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3306 8c368a17 Daofeng Li 
GSM1010871_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3307 8c368a17 Daofeng Li 
GSM1008557_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3308 8c368a17 Daofeng Li 
GSM979643_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3309 8c368a17 Daofeng Li 
GSM1024758_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
3310 8c368a17 Daofeng Li 
GSM981246_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3311 8c368a17 Daofeng Li 
GSM1003458_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3312 8c368a17 Daofeng Li 
GSM1010762_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3313 8c368a17 Daofeng Li 
GSM1010850_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3314 8c368a17 Daofeng Li 
GSM1003630_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
3315 8c368a17 Daofeng Li 
GSM1003610_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
3316 8c368a17 Daofeng Li 
GSM1024759_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
3317 8c368a17 Daofeng Li 
GSM1010786_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3318 8c368a17 Daofeng Li 
GSM1003504_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3319 8c368a17 Daofeng Li 
GSM1010784_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3320 8c368a17 Daofeng Li 
GSM1010866_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3321 8c368a17 Daofeng Li 
GSM1010798_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3322 8c368a17 Daofeng Li 
GSM1014537_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
3323 8c368a17 Daofeng Li 
GSM1010719_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3324 8c368a17 Daofeng Li 
GSM1003491_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3325 8c368a17 Daofeng Li 
GSM1014521_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
3326 8c368a17 Daofeng Li 
GSM1008605_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3327 8c368a17 Daofeng Li 
GSM1024756_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
3328 8c368a17 Daofeng Li 
GSM1008600_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3329 8c368a17 Daofeng Li 
GSM984621_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3330 8c368a17 Daofeng Li 
GSM1022629_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
3331 8c368a17 Daofeng Li 
GSM1014526_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
3332 8c368a17 Daofeng Li 
GSM1022656_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
3333 8c368a17 Daofeng Li 
GSM1010758_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3334 8c368a17 Daofeng Li 
GSM1008579_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3335 8c368a17 Daofeng Li 
GSM1014528_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
3336 8c368a17 Daofeng Li 
GSM1008586_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3337 8c368a17 Daofeng Li 
GSM1008571_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3338 8c368a17 Daofeng Li 
GSM1008590_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3339 8c368a17 Daofeng Li 
GSM1010887_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3340 8c368a17 Daofeng Li 
GSM1010891_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3341 8c368a17 Daofeng Li 
GSM979632_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3342 8c368a17 Daofeng Li 
GSM1010725_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3343 8c368a17 Daofeng Li 
GSM1006908_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
3344 8c368a17 Daofeng Li 
GSM1003482_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3345 8c368a17 Daofeng Li 
GSM981244_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3346 8c368a17 Daofeng Li 
GSM1003576_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3347 8c368a17 Daofeng Li 
GSM1003511_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3348 8c368a17 Daofeng Li 
GSM1010760_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3349 8c368a17 Daofeng Li 
GSM1003560_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3350 8c368a17 Daofeng Li 
GSM979663_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3351 8c368a17 Daofeng Li 
GSM984613_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3352 8c368a17 Daofeng Li 
GSM1010771_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3353 8c368a17 Daofeng Li 
GSM1006878_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
3354 8c368a17 Daofeng Li 
GSM1010873_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3355 8c368a17 Daofeng Li 
GSM1003622_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
3356 8c368a17 Daofeng Li 
GSM1010720_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3357 8c368a17 Daofeng Li 
GSM1010813_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3358 8c368a17 Daofeng Li 
GSM979633_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3359 8c368a17 Daofeng Li 
GSM1014510_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
3360 8c368a17 Daofeng Li 
GSM984615_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3361 8c368a17 Daofeng Li 
GSM1003450_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3362 8c368a17 Daofeng Li 
GSM1003469_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3363 8c368a17 Daofeng Li 
GSM979661_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3364 8c368a17 Daofeng Li 
GSM1010880_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3365 8c368a17 Daofeng Li 
GSM1010824_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3366 8c368a17 Daofeng Li 
GSM1008594_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3367 8c368a17 Daofeng Li 
GSM1008574_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3368 8c368a17 Daofeng Li 
GSM981256_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3369 8c368a17 Daofeng Li 
GSM1010750_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3370 8c368a17 Daofeng Li 
GSM1010900_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3371 8c368a17 Daofeng Li 
GSM1008573_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3372 8c368a17 Daofeng Li 
GSM1003543_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3373 8c368a17 Daofeng Li 
GSM1010902_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3374 8c368a17 Daofeng Li 
GSM1006877_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
3375 8c368a17 Daofeng Li 
GSM1003615_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
3376 8c368a17 Daofeng Li 
GSM1010914_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
3377 8c368a17 Daofeng Li 
GSM984614_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3378 8c368a17 Daofeng Li 
GSM1010851_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3379 8c368a17 Daofeng Li 
GSM981252_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3380 8c368a17 Daofeng Li 
GSM1024792_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
3381 8c368a17 Daofeng Li 
GSM1010888_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3382 8c368a17 Daofeng Li 
GSM1006893_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
3383 8c368a17 Daofeng Li 
GSM1024767_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
3384 8c368a17 Daofeng Li 
GSM979646_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3385 8c368a17 Daofeng Li 
GSM1022669_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
3386 8c368a17 Daofeng Li 
GSM1010811_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3387 8c368a17 Daofeng Li 
GSM1010825_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3388 8c368a17 Daofeng Li 
GSM1022662_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
3389 8c368a17 Daofeng Li 
GSM1014517_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
3390 8c368a17 Daofeng Li 
GSM981256_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3391 8c368a17 Daofeng Li 
GSM1010759_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3392 8c368a17 Daofeng Li 
GSM1006907_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
3393 8c368a17 Daofeng Li 
GSM1010788_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3394 8c368a17 Daofeng Li 
GSM1006902_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
3395 8c368a17 Daofeng Li 
GSM1010764_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3396 8c368a17 Daofeng Li 
GSM1010773_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3397 8c368a17 Daofeng Li 
GSM1014537_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
3398 8c368a17 Daofeng Li 
GSM1011123_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
3399 8c368a17 Daofeng Li 
GSM1006884_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
3400 8c368a17 Daofeng Li 
GSM1014509_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
3401 8c368a17 Daofeng Li 
GSM1014531_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
3402 8c368a17 Daofeng Li 
GSM1010875_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3403 8c368a17 Daofeng Li 
GSM1011121_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
3404 8c368a17 Daofeng Li 
GSM1006867_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
3405 8c368a17 Daofeng Li 
GSM984607_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3406 8c368a17 Daofeng Li 
GSM1010765_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3407 8c368a17 Daofeng Li 
GSM1006902_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
3408 8c368a17 Daofeng Li 
GSM1003505_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3409 8c368a17 Daofeng Li 
GSM1024747_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
3410 8c368a17 Daofeng Li 
GSM979648_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3411 8c368a17 Daofeng Li 
GSM1003453_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3412 8c368a17 Daofeng Li 
GSM1010833_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3413 8c368a17 Daofeng Li 
GSM1022639_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
3414 8c368a17 Daofeng Li 
GSM1003529_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3415 8c368a17 Daofeng Li 
GSM1003578_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3416 8c368a17 Daofeng Li 
GSM1006870_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
3417 8c368a17 Daofeng Li 
GSM1003516_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3418 8c368a17 Daofeng Li 
GSM979651_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3419 8c368a17 Daofeng Li 
GSM1010786_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3420 8c368a17 Daofeng Li 
GSM1008584_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3421 8c368a17 Daofeng Li 
GSM1003479_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3422 8c368a17 Daofeng Li 
GSM984607_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3423 8c368a17 Daofeng Li 
GSM1024743_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
3424 8c368a17 Daofeng Li 
GSM1006905_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
3425 8c368a17 Daofeng Li 
GSM1003548_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3426 8c368a17 Daofeng Li 
GSM1014536_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
3427 8c368a17 Daofeng Li 
GSM979639_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3428 8c368a17 Daofeng Li 
GSM1024742_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
3429 8c368a17 Daofeng Li 
GSM1003580_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3430 8c368a17 Daofeng Li 
GSM1006908_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
3431 8c368a17 Daofeng Li 
GSM1010904_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3432 8c368a17 Daofeng Li 
GSM984620_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3433 8c368a17 Daofeng Li 
GSM1010893_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3434 8c368a17 Daofeng Li 
GSM979657_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3435 8c368a17 Daofeng Li 
GSM1010901_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3436 8c368a17 Daofeng Li 
GSM1010895_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3437 8c368a17 Daofeng Li 
GSM1010894_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3438 8c368a17 Daofeng Li 
GSM1003554_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3439 8c368a17 Daofeng Li 
GSM1010860_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3440 8c368a17 Daofeng Li 
GSM1003550_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3441 8c368a17 Daofeng Li 
GSM1006878_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
3442 8c368a17 Daofeng Li 
GSM1014519_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
3443 8c368a17 Daofeng Li 
GSM1014541_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
3444 8c368a17 Daofeng Li 
GSM1022631_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
3445 8c368a17 Daofeng Li 
GSM1010732_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3446 8c368a17 Daofeng Li 
GSM1008595_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3447 8c368a17 Daofeng Li 
GSM1010878_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3448 8c368a17 Daofeng Li 
GSM1010848_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3449 8c368a17 Daofeng Li 
GSM981249_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3450 8c368a17 Daofeng Li 
GSM1003556_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3451 8c368a17 Daofeng Li 
GSM1014525_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
3452 8c368a17 Daofeng Li 
GSM1010867_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3453 8c368a17 Daofeng Li 
GSM1010823_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3454 8c368a17 Daofeng Li 
GSM984619_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3455 8c368a17 Daofeng Li 
GSM1008575_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3456 8c368a17 Daofeng Li 
GSM1008560_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3457 8c368a17 Daofeng Li 
GSM984606_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3458 8c368a17 Daofeng Li 
GSM1010862_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3459 8c368a17 Daofeng Li 
GSM1003451_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3460 8c368a17 Daofeng Li 
GSM1010779_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3461 8c368a17 Daofeng Li 
GSM984604_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3462 8c368a17 Daofeng Li 
GSM1003513_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3463 8c368a17 Daofeng Li 
GSM1006913_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
3464 8c368a17 Daofeng Li 
GSM1022676_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
3465 8c368a17 Daofeng Li 
GSM1010890_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3466 8c368a17 Daofeng Li 
GSM981251_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3467 8c368a17 Daofeng Li 
GSM1010806_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3468 8c368a17 Daofeng Li 
GSM979644_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3469 8c368a17 Daofeng Li 
GSM1003512_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3470 8c368a17 Daofeng Li 
GSM1006892_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
3471 8c368a17 Daofeng Li 
GSM1014539_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
3472 8c368a17 Daofeng Li 
GSM1003627_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
3473 8c368a17 Daofeng Li 
GSM1003611_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
3474 8c368a17 Daofeng Li 
GSM1014513_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
3475 8c368a17 Daofeng Li 
GSM1010774_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3476 8c368a17 Daofeng Li 
GSM1006883_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
3477 8c368a17 Daofeng Li 
GSM1011126_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
3478 8c368a17 Daofeng Li 
GSM1014520_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
3479 8c368a17 Daofeng Li 
GSM1014518_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
3480 8c368a17 Daofeng Li 
GSM1010772_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3481 8c368a17 Daofeng Li 
GSM979642_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3482 8c368a17 Daofeng Li 
GSM1014521_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
3483 8c368a17 Daofeng Li 
GSM981246_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3484 8c368a17 Daofeng Li 
GSM981250_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3485 8c368a17 Daofeng Li 
GSM979650_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3486 8c368a17 Daofeng Li 
GSM1010849_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3487 8c368a17 Daofeng Li 
GSM1006866_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
3488 8c368a17 Daofeng Li 
GSM1006912_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
3489 8c368a17 Daofeng Li 
GSM1024781_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
3490 8c368a17 Daofeng Li 
GSM981251_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3491 8c368a17 Daofeng Li 
GSM984611_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3492 8c368a17 Daofeng Li 
GSM1003584_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3493 8c368a17 Daofeng Li 
GSM1024777_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
3494 8c368a17 Daofeng Li 
GSM979660_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3495 8c368a17 Daofeng Li 
GSM979638_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3496 8c368a17 Daofeng Li 
GSM1014508_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
3497 8c368a17 Daofeng Li 
GSM1006914_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
3498 8c368a17 Daofeng Li 
GSM1003626_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
3499 8c368a17 Daofeng Li 
GSM1010897_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3500 8c368a17 Daofeng Li 
GSM1022666_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
3501 8c368a17 Daofeng Li 
GSM979657_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3502 8c368a17 Daofeng Li 
GSM1010795_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3503 8c368a17 Daofeng Li 
GSM1003485_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3504 8c368a17 Daofeng Li 
GSM979662_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3505 8c368a17 Daofeng Li 
GSM1003613_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
3506 8c368a17 Daofeng Li 
GSM979637_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3507 8c368a17 Daofeng Li 
GSM1011123_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
3508 8c368a17 Daofeng Li 
GSM984607_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3509 8c368a17 Daofeng Li 
GSM1010751_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3510 8c368a17 Daofeng Li 
GSM1008580_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3511 8c368a17 Daofeng Li 
GSM1006904_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
3512 8c368a17 Daofeng Li 
GSM979640_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3513 8c368a17 Daofeng Li 
GSM979645_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3514 8c368a17 Daofeng Li 
GSM1010750_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3515 8c368a17 Daofeng Li 
GSM1024751_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
3516 8c368a17 Daofeng Li 
GSM984619_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3517 8c368a17 Daofeng Li 
GSM1010803_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3518 8c368a17 Daofeng Li 
GSM984618_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3519 8c368a17 Daofeng Li 
GSM1022638_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
3520 8c368a17 Daofeng Li 
GSM1008596_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3521 8c368a17 Daofeng Li 
GSM981260_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3522 8c368a17 Daofeng Li 
GSM1003552_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3523 8c368a17 Daofeng Li 
GSM1010826_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3524 8c368a17 Daofeng Li 
GSM1010866_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3525 8c368a17 Daofeng Li 
GSM981253_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3526 8c368a17 Daofeng Li 
GSM979663_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3527 8c368a17 Daofeng Li 
GSM981247_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3528 8c368a17 Daofeng Li 
GSM979633_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3529 8c368a17 Daofeng Li 
GSM1010835_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3530 8c368a17 Daofeng Li 
GSM1014540_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
3531 8c368a17 Daofeng Li 
GSM1010822_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3532 8c368a17 Daofeng Li 
GSM979640_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3533 8c368a17 Daofeng Li 
GSM1014522_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
3534 8c368a17 Daofeng Li 
GSM1006905_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
3535 8c368a17 Daofeng Li 
GSM979657_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3536 8c368a17 Daofeng Li 
GSM1022664_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
3537 8c368a17 Daofeng Li 
GSM1008561_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3538 8c368a17 Daofeng Li 
GSM979658_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3539 8c368a17 Daofeng Li 
GSM979631_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3540 8c368a17 Daofeng Li 
GSM1008577_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3541 8c368a17 Daofeng Li 
GSM1010756_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3542 8c368a17 Daofeng Li 
GSM1010879_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3543 8c368a17 Daofeng Li 
GSM1014523_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
3544 8c368a17 Daofeng Li 
GSM1006910_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
3545 8c368a17 Daofeng Li 
GSM979641_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3546 8c368a17 Daofeng Li 
GSM979644_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3547 8c368a17 Daofeng Li 
GSM1010764_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3548 8c368a17 Daofeng Li 
GSM1003473_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3549 8c368a17 Daofeng Li 
GSM1003528_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3550 8c368a17 Daofeng Li 
GSM1010883_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3551 8c368a17 Daofeng Li 
GSM1010869_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3552 8c368a17 Daofeng Li 
GSM1022625_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
3553 8c368a17 Daofeng Li 
GSM984605_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3554 8c368a17 Daofeng Li 
GSM981260_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3555 8c368a17 Daofeng Li 
GSM1008561_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3556 8c368a17 Daofeng Li 
GSM1010793_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3557 8c368a17 Daofeng Li 
GSM1010895_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3558 8c368a17 Daofeng Li 
GSM1010802_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3559 8c368a17 Daofeng Li 
GSM1008602_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3560 8c368a17 Daofeng Li 
GSM981256_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3561 8c368a17 Daofeng Li 
GSM1010893_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3562 8c368a17 Daofeng Li 
GSM1010844_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3563 8c368a17 Daofeng Li 
GSM1006882_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
3564 8c368a17 Daofeng Li 
GSM1010725_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3565 8c368a17 Daofeng Li 
GSM1006873_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
3566 8c368a17 Daofeng Li 
GSM984612_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3567 8c368a17 Daofeng Li 
GSM1010847_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3568 8c368a17 Daofeng Li 
GSM1010882_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3569 8c368a17 Daofeng Li 
GSM1003551_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3570 8c368a17 Daofeng Li 
GSM1003628_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
3571 8c368a17 Daofeng Li 
GSM1010822_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3572 8c368a17 Daofeng Li 
GSM1011129_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
3573 8c368a17 Daofeng Li 
GSM1008604_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3574 8c368a17 Daofeng Li 
GSM979656_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3575 8c368a17 Daofeng Li 
GSM984614_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3576 8c368a17 Daofeng Li 
GSM1010742_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3577 8c368a17 Daofeng Li 
GSM981245_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3578 8c368a17 Daofeng Li 
GSM1010793_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3579 8c368a17 Daofeng Li 
GSM1003540_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3580 8c368a17 Daofeng Li 
GSM1010857_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3581 8c368a17 Daofeng Li 
GSM1010843_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3582 8c368a17 Daofeng Li 
GSM1006904_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
3583 8c368a17 Daofeng Li 
GSM1003621_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
3584 8c368a17 Daofeng Li 
GSM1014536_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
3585 8c368a17 Daofeng Li 
GSM1003537_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3586 8c368a17 Daofeng Li 
GSM1010790_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3587 8c368a17 Daofeng Li 
GSM1006910_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
3588 8c368a17 Daofeng Li 
GSM984610_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3589 8c368a17 Daofeng Li 
GSM1014524_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
3590 8c368a17 Daofeng Li 
GSM1024775_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
3591 8c368a17 Daofeng Li 
GSM1008576_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3592 8c368a17 Daofeng Li 
GSM1010890_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3593 8c368a17 Daofeng Li 
GSM1014528_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
3594 8c368a17 Daofeng Li 
GSM981252_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3595 8c368a17 Daofeng Li 
GSM979659_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3596 8c368a17 Daofeng Li 
GSM1006907_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
3597 8c368a17 Daofeng Li 
GSM1010809_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3598 8c368a17 Daofeng Li 
GSM1010831_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3599 8c368a17 Daofeng Li 
GSM1010778_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3600 8c368a17 Daofeng Li 
GSM1010783_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3601 8c368a17 Daofeng Li 
GSM1010820_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3602 8c368a17 Daofeng Li 
GSM1014534_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
3603 8c368a17 Daofeng Li 
GSM1010872_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3604 8c368a17 Daofeng Li 
GSM1024786_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
3605 8c368a17 Daofeng Li 
GSM979663_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3606 8c368a17 Daofeng Li 
GSM1010876_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3607 8c368a17 Daofeng Li 
GSM981255_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3608 8c368a17 Daofeng Li 
GSM1006895_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
3609 8c368a17 Daofeng Li 
GSM1010859_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3610 8c368a17 Daofeng Li 
GSM1010737_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3611 8c368a17 Daofeng Li 
GSM984616_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3612 8c368a17 Daofeng Li 
GSM979654_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3613 8c368a17 Daofeng Li 
GSM1011130_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
3614 8c368a17 Daofeng Li 
GSM984615_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3615 8c368a17 Daofeng Li 
GSM1008558_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3616 8c368a17 Daofeng Li 
GSM1006882_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
3617 8c368a17 Daofeng Li 
GSM1014510_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
3618 8c368a17 Daofeng Li 
GSM979653_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3619 8c368a17 Daofeng Li 
GSM1008606_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3620 8c368a17 Daofeng Li 
GSM1010783_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3621 8c368a17 Daofeng Li 
GSM1014512_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
3622 8c368a17 Daofeng Li 
GSM1022667_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
3623 8c368a17 Daofeng Li 
GSM1024788_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
3624 8c368a17 Daofeng Li 
GSM1011125_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
3625 8c368a17 Daofeng Li 
GSM1003455_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3626 8c368a17 Daofeng Li 
GSM1014519_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
3627 8c368a17 Daofeng Li 
GSM1006876_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
3628 8c368a17 Daofeng Li 
GSM1010834_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3629 8c368a17 Daofeng Li 
GSM984610_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3630 8c368a17 Daofeng Li 
GSM1003486_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3631 8c368a17 Daofeng Li 
GSM1010834_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3632 8c368a17 Daofeng Li 
GSM1022670_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
3633 8c368a17 Daofeng Li 
GSM1003573_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3634 8c368a17 Daofeng Li 
GSM1010878_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3635 8c368a17 Daofeng Li 
GSM1010902_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3636 8c368a17 Daofeng Li 
GSM1024750_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
3637 8c368a17 Daofeng Li 
GSM1010888_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3638 8c368a17 Daofeng Li 
GSM1010741_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3639 8c368a17 Daofeng Li 
GSM984604_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3640 8c368a17 Daofeng Li 
GSM981254_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3641 8c368a17 Daofeng Li 
GSM981255_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3642 8c368a17 Daofeng Li 
GSM1010872_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3643 8c368a17 Daofeng Li 
GSM984618_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3644 8c368a17 Daofeng Li 
GSM1010776_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3645 8c368a17 Daofeng Li 
GSM1024791_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
3646 8c368a17 Daofeng Li 
GSM1003489_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3647 8c368a17 Daofeng Li 
GSM1010856_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3648 8c368a17 Daofeng Li 
GSM979635_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3649 8c368a17 Daofeng Li 
GSM1014524_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
3650 8c368a17 Daofeng Li 
GSM1006881_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
3651 8c368a17 Daofeng Li 
GSM1010892_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3652 8c368a17 Daofeng Li 
GSM1014531_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
3653 8c368a17 Daofeng Li 
GSM1010871_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3654 8c368a17 Daofeng Li 
GSM984612_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3655 8c368a17 Daofeng Li 
GSM984617_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3656 8c368a17 Daofeng Li 
GSM979658_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3657 8c368a17 Daofeng Li 
GSM1022636_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
3658 8c368a17 Daofeng Li 
GSM1010820_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3659 8c368a17 Daofeng Li 
GSM1003462_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3660 8c368a17 Daofeng Li 
GSM981247_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3661 8c368a17 Daofeng Li 
GSM1024765_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
3662 8c368a17 Daofeng Li 
GSM1003527_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3663 8c368a17 Daofeng Li 
GSM1003581_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3664 8c368a17 Daofeng Li 
GSM979637_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3665 8c368a17 Daofeng Li 
GSM1011124_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
3666 8c368a17 Daofeng Li 
GSM1006912_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
3667 8c368a17 Daofeng Li 
GSM981253_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3668 8c368a17 Daofeng Li 
GSM1010733_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3669 8c368a17 Daofeng Li 
GSM1014532_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
3670 8c368a17 Daofeng Li 
GSM1006886_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
3671 8c368a17 Daofeng Li 
GSM1014529_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
3672 8c368a17 Daofeng Li 
GSM1006911_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
3673 8c368a17 Daofeng Li 
GSM1003538_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3674 8c368a17 Daofeng Li 
GSM1010889_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3675 8c368a17 Daofeng Li 
GSM984608_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3676 8c368a17 Daofeng Li 
GSM1006911_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
3677 8c368a17 Daofeng Li 
GSM979653_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3678 8c368a17 Daofeng Li 
GSM1003544_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3679 8c368a17 Daofeng Li 
GSM1011127_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
3680 8c368a17 Daofeng Li 
GSM1006894_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
3681 8c368a17 Daofeng Li 
GSM1003602_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
3682 8c368a17 Daofeng Li 
GSM1010832_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3683 8c368a17 Daofeng Li 
GSM979637_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3684 8c368a17 Daofeng Li 
GSM1010771_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3685 8c368a17 Daofeng Li 
GSM1008570_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3686 8c368a17 Daofeng Li 
GSM979646_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3687 8c368a17 Daofeng Li 
GSM1008571_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3688 8c368a17 Daofeng Li 
GSM1011121_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
3689 8c368a17 Daofeng Li 
GSM981247_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3690 8c368a17 Daofeng Li 
GSM1003523_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3691 8c368a17 Daofeng Li 
GSM1006886_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
3692 8c368a17 Daofeng Li 
GSM1010881_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3693 8c368a17 Daofeng Li 
GSM981256_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3694 8c368a17 Daofeng Li 
GSM1022673_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
3695 8c368a17 Daofeng Li 
GSM1010840_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3696 8c368a17 Daofeng Li 
GSM1022652_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
3697 8c368a17 Daofeng Li 
GSM1010785_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3698 8c368a17 Daofeng Li 
GSM981259_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3699 8c368a17 Daofeng Li 
GSM1003510_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3700 8c368a17 Daofeng Li 
GSM1024778_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
3701 8c368a17 Daofeng Li 
GSM979643_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3702 8c368a17 Daofeng Li 
GSM1003447_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3703 8c368a17 Daofeng Li 
GSM1010838_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3704 8c368a17 Daofeng Li 
GSM1014516_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
3705 8c368a17 Daofeng Li 
GSM1010785_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3706 8c368a17 Daofeng Li 
GSM979636_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3707 8c368a17 Daofeng Li 
GSM1008600_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3708 8c368a17 Daofeng Li 
GSM981258_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3709 8c368a17 Daofeng Li 
GSM1010728_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3710 8c368a17 Daofeng Li 
GSM1008603_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3711 8c368a17 Daofeng Li 
GSM981250_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3712 8c368a17 Daofeng Li 
GSM1010816_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3713 8c368a17 Daofeng Li 
GSM1010865_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3714 8c368a17 Daofeng Li 
GSM1022661_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
3715 8c368a17 Daofeng Li 
GSM979633_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3716 8c368a17 Daofeng Li 
GSM1006875_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
3717 8c368a17 Daofeng Li 
GSM979634_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3718 8c368a17 Daofeng Li 
GSM1006907_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
3719 8c368a17 Daofeng Li 
GSM1010836_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3720 8c368a17 Daofeng Li 
GSM1008599_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3721 8c368a17 Daofeng Li 
GSM1010761_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3722 8c368a17 Daofeng Li 
GSM1010874_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3723 8c368a17 Daofeng Li 
GSM1003464_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3724 8c368a17 Daofeng Li 
GSM1003586_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3725 8c368a17 Daofeng Li 
GSM1008576_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3726 8c368a17 Daofeng Li 
GSM1011125_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
3727 8c368a17 Daofeng Li 
GSM1010775_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3728 8c368a17 Daofeng Li 
GSM1008564_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3729 8c368a17 Daofeng Li 
GSM1003508_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3730 8c368a17 Daofeng Li 
GSM979651_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3731 8c368a17 Daofeng Li 
GSM1003472_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3732 8c368a17 Daofeng Li 
GSM979645_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3733 8c368a17 Daofeng Li 
GSM1003577_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3734 8c368a17 Daofeng Li 
GSM1010898_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3735 8c368a17 Daofeng Li 
GSM1003454_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3736 8c368a17 Daofeng Li 
GSM1006903_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
3737 8c368a17 Daofeng Li 
GSM1010876_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3738 8c368a17 Daofeng Li 
GSM1010831_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3739 8c368a17 Daofeng Li 
GSM1008557_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3740 8c368a17 Daofeng Li 
GSM984611_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3741 8c368a17 Daofeng Li 
GSM1010738_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3742 8c368a17 Daofeng Li 
GSM1010842_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3743 8c368a17 Daofeng Li 
GSM979634_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3744 8c368a17 Daofeng Li 
GSM1008585_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3745 8c368a17 Daofeng Li 
GSM1024744_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
3746 8c368a17 Daofeng Li 
GSM1003545_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3747 8c368a17 Daofeng Li 
GSM1024771_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
3748 8c368a17 Daofeng Li 
GSM1014529_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
3749 8c368a17 Daofeng Li 
GSM984614_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3750 8c368a17 Daofeng Li 
GSM1014539_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
3751 8c368a17 Daofeng Li 
GSM1008568_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3752 8c368a17 Daofeng Li 
GSM1022668_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
3753 8c368a17 Daofeng Li 
GSM1003463_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3754 8c368a17 Daofeng Li 
GSM1010883_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3755 8c368a17 Daofeng Li 
GSM1010721_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3756 8c368a17 Daofeng Li 
GSM1003585_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3757 8c368a17 Daofeng Li 
GSM984620_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3758 8c368a17 Daofeng Li 
GSM1022650_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
3759 8c368a17 Daofeng Li 
GSM979650_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3760 8c368a17 Daofeng Li 
GSM1010751_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3761 8c368a17 Daofeng Li 
GSM1003521_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3762 8c368a17 Daofeng Li 
GSM1010853_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3763 8c368a17 Daofeng Li 
GSM1008590_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3764 8c368a17 Daofeng Li 
GSM1010840_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3765 8c368a17 Daofeng Li 
GSM1003542_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3766 8c368a17 Daofeng Li 
GSM981243_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3767 8c368a17 Daofeng Li 
GSM1022651_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
3768 8c368a17 Daofeng Li 
GSM1010869_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3769 8c368a17 Daofeng Li 
GSM1014511_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
3770 8c368a17 Daofeng Li 
GSM1006869_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
3771 8c368a17 Daofeng Li 
GSM1003522_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3772 8c368a17 Daofeng Li 
GSM979655_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3773 8c368a17 Daofeng Li 
GSM1010900_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3774 8c368a17 Daofeng Li 
GSM1003481_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3775 8c368a17 Daofeng Li 
GSM1003604_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
3776 8c368a17 Daofeng Li 
GSM1010845_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3777 8c368a17 Daofeng Li 
GSM1003547_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3778 8c368a17 Daofeng Li 
GSM1022627_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
3779 8c368a17 Daofeng Li 
GSM1010866_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3780 8c368a17 Daofeng Li 
GSM1010790_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3781 8c368a17 Daofeng Li 
GSM1010847_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3782 8c368a17 Daofeng Li 
GSM1010894_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3783 8c368a17 Daofeng Li 
GSM1010792_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3784 8c368a17 Daofeng Li 
GSM1010738_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3785 8c368a17 Daofeng Li 
GSM979643_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3786 8c368a17 Daofeng Li 
GSM1010906_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3787 8c368a17 Daofeng Li 
GSM1010815_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3788 8c368a17 Daofeng Li 
GSM1022665_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
3789 8c368a17 Daofeng Li 
GSM1010860_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3790 8c368a17 Daofeng Li 
GSM1003619_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
3791 8c368a17 Daofeng Li 
GSM984605_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3792 8c368a17 Daofeng Li 
GSM984606_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3793 8c368a17 Daofeng Li 
GSM1022632_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
3794 8c368a17 Daofeng Li 
GSM1010885_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3795 8c368a17 Daofeng Li 
GSM1008592_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3796 8c368a17 Daofeng Li 
GSM1006914_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
3797 8c368a17 Daofeng Li 
GSM1010747_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3798 8c368a17 Daofeng Li 
GSM984604_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3799 8c368a17 Daofeng Li 
GSM1008558_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3800 8c368a17 Daofeng Li 
GSM1003497_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3801 8c368a17 Daofeng Li 
GSM1008563_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3802 8c368a17 Daofeng Li 
GSM1006887_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
3803 8c368a17 Daofeng Li 
GSM1003461_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3804 8c368a17 Daofeng Li 
GSM1024790_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
3805 8c368a17 Daofeng Li 
GSM1014522_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
3806 8c368a17 Daofeng Li 
GSM1010796_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3807 8c368a17 Daofeng Li 
GSM1003498_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3808 8c368a17 Daofeng Li 
GSM1010740_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3809 8c368a17 Daofeng Li 
GSM1008595_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3810 8c368a17 Daofeng Li 
GSM1010812_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3811 8c368a17 Daofeng Li 
GSM1003567_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3812 8c368a17 Daofeng Li 
GSM1014514_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
3813 8c368a17 Daofeng Li 
GSM1010796_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3814 8c368a17 Daofeng Li 
GSM1011122_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
3815 8c368a17 Daofeng Li 
GSM984605_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3816 8c368a17 Daofeng Li 
GSM1010905_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3817 8c368a17 Daofeng Li 
GSM1010867_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3818 8c368a17 Daofeng Li 
GSM1003553_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3819 8c368a17 Daofeng Li 
GSM1010757_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3820 8c368a17 Daofeng Li 
GSM981260_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3821 8c368a17 Daofeng Li 
GSM1008566_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3822 8c368a17 Daofeng Li 
GSM1010823_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3823 8c368a17 Daofeng Li 
GSM1011128_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
3824 8c368a17 Daofeng Li 
GSM979638_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3825 8c368a17 Daofeng Li 
GSM1003549_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3826 8c368a17 Daofeng Li 
GSM1010770_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3827 8c368a17 Daofeng Li 
GSM1024739_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
3828 8c368a17 Daofeng Li 
GSM981245_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3829 8c368a17 Daofeng Li 
GSM984614_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3830 8c368a17 Daofeng Li 
GSM1003478_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3831 8c368a17 Daofeng Li 
GSM979649_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3832 8c368a17 Daofeng Li 
GSM1010873_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3833 8c368a17 Daofeng Li 
GSM1024770_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
3834 8c368a17 Daofeng Li 
GSM1010851_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3835 8c368a17 Daofeng Li 
GSM1008587_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3836 8c368a17 Daofeng Li 
GSM1008603_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3837 8c368a17 Daofeng Li 
GSM979662_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3838 8c368a17 Daofeng Li 
GSM984609_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3839 8c368a17 Daofeng Li 
GSM1008594_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3840 8c368a17 Daofeng Li 
GSM1006910_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
3841 8c368a17 Daofeng Li 
GSM1010817_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3842 8c368a17 Daofeng Li 
GSM979639_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3843 8c368a17 Daofeng Li 
GSM1010727_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3844 8c368a17 Daofeng Li 
GSM1006904_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
3845 8c368a17 Daofeng Li 
GSM979636_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3846 8c368a17 Daofeng Li 
GSM1010803_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3847 8c368a17 Daofeng Li 
GSM1010739_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3848 8c368a17 Daofeng Li 
GSM1010730_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3849 8c368a17 Daofeng Li 
GSM1011120_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
3850 8c368a17 Daofeng Li 
GSM1022642_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
3851 8c368a17 Daofeng Li 
GSM981244_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3852 8c368a17 Daofeng Li 
GSM1022643_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
3853 8c368a17 Daofeng Li 
GSM1003616_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
3854 8c368a17 Daofeng Li 
GSM1006903_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
3855 8c368a17 Daofeng Li 
GSM1014517_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
3856 8c368a17 Daofeng Li 
GSM1024764_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
3857 8c368a17 Daofeng Li 
GSM1008569_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3858 8c368a17 Daofeng Li 
GSM1010748_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3859 8c368a17 Daofeng Li 
GSM1010723_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3860 8c368a17 Daofeng Li 
GSM1010768_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3861 8c368a17 Daofeng Li 
GSM1010808_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3862 8c368a17 Daofeng Li 
GSM1010867_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3863 8c368a17 Daofeng Li 
GSM1003625_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
3864 8c368a17 Daofeng Li 
GSM1022674_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
3865 8c368a17 Daofeng Li 
GSM984609_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3866 8c368a17 Daofeng Li 
GSM1010891_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3867 8c368a17 Daofeng Li 
GSM979661_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3868 8c368a17 Daofeng Li 
GSM1010858_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3869 8c368a17 Daofeng Li 
GSM981246_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3870 8c368a17 Daofeng Li 
GSM1010781_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3871 8c368a17 Daofeng Li 
GSM1006906_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
3872 8c368a17 Daofeng Li 
GSM1010808_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3873 8c368a17 Daofeng Li 
GSM1022675_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
3874 8c368a17 Daofeng Li 
GSM979645_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3875 8c368a17 Daofeng Li 
GSM1006869_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
3876 8c368a17 Daofeng Li 
GSM1003452_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3877 8c368a17 Daofeng Li 
GSM981258_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3878 8c368a17 Daofeng Li 
GSM1024794_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
3879 8c368a17 Daofeng Li 
GSM979653_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3880 8c368a17 Daofeng Li 
GSM1010805_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3881 8c368a17 Daofeng Li 
GSM1008596_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3882 8c368a17 Daofeng Li 
GSM1010914_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
3883 8c368a17 Daofeng Li 
GSM1003603_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
3884 8c368a17 Daofeng Li 
GSM1014509_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
3885 8c368a17 Daofeng Li 
GSM979651_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3886 8c368a17 Daofeng Li 
GSM979647_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3887 8c368a17 Daofeng Li 
GSM1010818_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3888 8c368a17 Daofeng Li 
GSM1010728_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3889 8c368a17 Daofeng Li 
GSM981258_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3890 8c368a17 Daofeng Li 
GSM979637_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3891 8c368a17 Daofeng Li 
GSM1014508_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
3892 8c368a17 Daofeng Li 
GSM1006906_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
3893 8c368a17 Daofeng Li 
GSM1024780_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
3894 8c368a17 Daofeng Li 
GSM1024783_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
3895 8c368a17 Daofeng Li 
GSM1010718_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3896 8c368a17 Daofeng Li 
GSM1010854_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3897 8c368a17 Daofeng Li 
GSM1010767_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3898 8c368a17 Daofeng Li 
GSM1010894_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3899 8c368a17 Daofeng Li 
GSM979661_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3900 8c368a17 Daofeng Li 
GSM1008581_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3901 8c368a17 Daofeng Li 
GSM1010804_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3902 8c368a17 Daofeng Li 
GSM1010805_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3903 8c368a17 Daofeng Li 
GSM1010850_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3904 8c368a17 Daofeng Li 
GSM1024748_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
3905 8c368a17 Daofeng Li 
GSM1010870_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3906 8c368a17 Daofeng Li 
GSM1006865_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
3907 8c368a17 Daofeng Li 
GSM984615_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3908 8c368a17 Daofeng Li 
GSM1003571_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3909 8c368a17 Daofeng Li 
GSM1010763_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3910 8c368a17 Daofeng Li 
GSM1003633_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
3911 8c368a17 Daofeng Li 
GSM1010811_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3912 8c368a17 Daofeng Li 
GSM981249_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3913 8c368a17 Daofeng Li 
GSM1010880_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3914 8c368a17 Daofeng Li 
GSM1010863_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3915 8c368a17 Daofeng Li 
GSM981252_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3916 8c368a17 Daofeng Li 
GSM1003524_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3917 8c368a17 Daofeng Li 
GSM1008583_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3918 8c368a17 Daofeng Li 
GSM1003632_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
3919 8c368a17 Daofeng Li 
GSM1003480_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3920 8c368a17 Daofeng Li 
GSM1010844_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3921 8c368a17 Daofeng Li 
GSM1011119_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
3922 8c368a17 Daofeng Li 
GSM1014538_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
3923 8c368a17 Daofeng Li 
GSM1008592_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3924 8c368a17 Daofeng Li 
GSM1003574_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3925 8c368a17 Daofeng Li 
GSM1010777_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3926 8c368a17 Daofeng Li 
GSM984617_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3927 8c368a17 Daofeng Li 
GSM1006866_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
3928 8c368a17 Daofeng Li 
GSM1010899_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3929 8c368a17 Daofeng Li 
GSM1003494_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3930 8c368a17 Daofeng Li 
GSM1003470_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3931 8c368a17 Daofeng Li 
GSM1024740_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
3932 8c368a17 Daofeng Li 
GSM1010801_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3933 8c368a17 Daofeng Li 
GSM1014523_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
3934 8c368a17 Daofeng Li 
GSM1024782_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
3935 8c368a17 Daofeng Li 
GSM1010839_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3936 8c368a17 Daofeng Li 
GSM1010724_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3937 8c368a17 Daofeng Li 
GSM1010788_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3938 8c368a17 Daofeng Li 
GSM1003460_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3939 8c368a17 Daofeng Li 
GSM1006888_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
3940 8c368a17 Daofeng Li 
GSM1022654_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
3941 8c368a17 Daofeng Li 
GSM1006913_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
3942 8c368a17 Daofeng Li 
GSM1008579_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3943 8c368a17 Daofeng Li 
GSM1003496_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3944 8c368a17 Daofeng Li 
GSM979642_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3945 8c368a17 Daofeng Li 
GSM1010852_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3946 8c368a17 Daofeng Li 
GSM979634_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3947 8c368a17 Daofeng Li 
GSM1008586_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3948 8c368a17 Daofeng Li 
GSM1010807_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3949 8c368a17 Daofeng Li 
GSM1010743_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3950 8c368a17 Daofeng Li 
GSM1010724_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3951 8c368a17 Daofeng Li 
GSM984608_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3952 8c368a17 Daofeng Li 
GSM1008598_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3953 8c368a17 Daofeng Li 
GSM1010896_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3954 8c368a17 Daofeng Li 
GSM1010814_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3955 8c368a17 Daofeng Li 
GSM1008567_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3956 8c368a17 Daofeng Li 
GSM981254_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3957 8c368a17 Daofeng Li 
GSM979660_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3958 8c368a17 Daofeng Li 
GSM1003502_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3959 8c368a17 Daofeng Li 
GSM1006909_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
3960 8c368a17 Daofeng Li 
GSM1003514_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3961 8c368a17 Daofeng Li 
GSM1003606_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
3962 8c368a17 Daofeng Li 
GSM984613_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3963 8c368a17 Daofeng Li 
GSM1003465_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3964 8c368a17 Daofeng Li 
GSM1010841_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3965 8c368a17 Daofeng Li 
GSM1006906_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
3966 8c368a17 Daofeng Li 
GSM1010719_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3967 8c368a17 Daofeng Li 
GSM981243_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3968 8c368a17 Daofeng Li 
GSM1024741_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
3969 8c368a17 Daofeng Li 
GSM1003515_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3970 8c368a17 Daofeng Li 
GSM984611_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3971 8c368a17 Daofeng Li 
GSM1024779_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
3972 8c368a17 Daofeng Li 
GSM981257_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3973 8c368a17 Daofeng Li 
GSM1010775_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3974 8c368a17 Daofeng Li 
GSM1006865_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
3975 8c368a17 Daofeng Li 
GSM984610_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3976 8c368a17 Daofeng Li 
GSM1003623_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
3977 8c368a17 Daofeng Li 
GSM1024776_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
3978 8c368a17 Daofeng Li 
GSM1022671_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
3979 8c368a17 Daofeng Li 
GSM1003569_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3980 8c368a17 Daofeng Li 
GSM979648_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3981 8c368a17 Daofeng Li 
GSM1003614_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
3982 8c368a17 Daofeng Li 
GSM1003566_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3983 8c368a17 Daofeng Li 
GSM1003535_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3984 8c368a17 Daofeng Li 
GSM979658_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3985 8c368a17 Daofeng Li 
GSM1022660_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
3986 8c368a17 Daofeng Li 
GSM1014525_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
3987 8c368a17 Daofeng Li 
GSM1008598_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
3988 8c368a17 Daofeng Li 
GSM1022672_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
3989 8c368a17 Daofeng Li 
GSM1010747_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3990 8c368a17 Daofeng Li 
GSM1010791_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3991 8c368a17 Daofeng Li 
GSM1003546_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
3992 8c368a17 Daofeng Li 
GSM979639_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3993 8c368a17 Daofeng Li 
GSM1010789_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3994 8c368a17 Daofeng Li 
GSM1006881_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
3995 8c368a17 Daofeng Li 
GSM981250_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
3996 8c368a17 Daofeng Li 
GSM1010887_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3997 8c368a17 Daofeng Li 
GSM979639_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
3998 8c368a17 Daofeng Li 
GSM1010727_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
3999 8c368a17 Daofeng Li 
GSM1008565_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
4000 8c368a17 Daofeng Li 
GSM981243_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
4001 8c368a17 Daofeng Li 
GSM1010723_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
4002 8c368a17 Daofeng Li 
GSM1010748_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
4003 8c368a17 Daofeng Li 
GSM1008562_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
4004 8c368a17 Daofeng Li 
GSM1010897_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
4005 8c368a17 Daofeng Li 
GSM1022658_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
4006 8c368a17 Daofeng Li 
GSM1010758_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
4007 8c368a17 Daofeng Li 
GSM1010732_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
4008 8c368a17 Daofeng Li 
GSM1006879_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
4009 8c368a17 Daofeng Li 
GSM1006871_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
4010 8c368a17 Daofeng Li 
GSM1008567_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
4011 8c368a17 Daofeng Li 
GSM1003605_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
4012 8c368a17 Daofeng Li 
GSM1010861_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
4013 8c368a17 Daofeng Li 
GSM1008606_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
4014 8c368a17 Daofeng Li 
GSM1003476_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
4015 8c368a17 Daofeng Li 
GSM979631_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
4016 8c368a17 Daofeng Li 
GSM1009528_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
4017 8c368a17 Daofeng Li 
GSM1006913_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
4018 8c368a17 Daofeng Li 
GSM1010746_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
4019 8c368a17 Daofeng Li 
GSM1010780_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
4020 8c368a17 Daofeng Li 
GSM1006908_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
4021 8c368a17 Daofeng Li 
GSM1010885_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
4022 8c368a17 Daofeng Li 
GSM1010755_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
4023 8c368a17 Daofeng Li 
GSM1003539_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
4024 8c368a17 Daofeng Li 
GSM1003488_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
4025 8c368a17 Daofeng Li 
GSM1022637_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
4026 8c368a17 Daofeng Li 
GSM1003612_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
4027 8c368a17 Daofeng Li 
GSM1003483_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
4028 8c368a17 Daofeng Li 
GSM1010859_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
4029 8c368a17 Daofeng Li 
GSM1003583_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
4030 8c368a17 Daofeng Li 
GSM1008593_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
4031 8c368a17 Daofeng Li 
GSM981251_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
4032 8c368a17 Daofeng Li 
GSM979647_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
4033 8c368a17 Daofeng Li 
GSM1010829_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
4034 8c368a17 Daofeng Li 
GSM1003618_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
4035 8c368a17 Daofeng Li 
GSM1010782_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
4036 8c368a17 Daofeng Li 
GSM1014532_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
4037 8c368a17 Daofeng Li 
GSM1010877_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
4038 8c368a17 Daofeng Li 
GSM1010792_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
4039 8c368a17 Daofeng Li 
GSM1003492_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
4040 8c368a17 Daofeng Li 
GSM1022641_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
4041 8c368a17 Daofeng Li 
GSM1008591_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
4042 8c368a17 Daofeng Li 
GSM1006887_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
4043 8c368a17 Daofeng Li 
GSM1010905_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
4044 8c368a17 Daofeng Li 
GSM1003490_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
4045 8c368a17 Daofeng Li 
GSM1014513_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
4046 8c368a17 Daofeng Li 
GSM979649_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
4047 8c368a17 Daofeng Li 
GSM1010718_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
4048 8c368a17 Daofeng Li 
GSM1010744_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
4049 8c368a17 Daofeng Li 
GSM1003484_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
4050 8c368a17 Daofeng Li 
GSM1008565_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
4051 8c368a17 Daofeng Li 
GSM1010830_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
4052 8c368a17 Daofeng Li 
GSM1022628_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
4053 8c368a17 Daofeng Li 
GSM1010742_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
4054 8c368a17 Daofeng Li 
GSM1003493_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
4055 8c368a17 Daofeng Li 
GSM1014533_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
4056 8c368a17 Daofeng Li 
GSM1010773_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
4057 8c368a17 Daofeng Li 
GSM1022626_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
4058 8c368a17 Daofeng Li 
GSM981258_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
4059 8c368a17 Daofeng Li 
GSM1008582_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
4060 8c368a17 Daofeng Li 
GSM1010797_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
4061 8c368a17 Daofeng Li 
GSM984616_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
4062 8c368a17 Daofeng Li 
GSM1010798_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
4063 8c368a17 Daofeng Li 
GSM1022659_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
4064 8c368a17 Daofeng Li 
GSM1010886_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
4065 8c368a17 Daofeng Li 
GSM1003620_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhTfbs
4066 8c368a17 Daofeng Li 
GSM1010894_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
4067 8c368a17 Daofeng Li 
GSM1010828_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
4068 8c368a17 Daofeng Li 
GSM1010855_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
4069 8c368a17 Daofeng Li 
GSM1008573_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
4070 8c368a17 Daofeng Li 
GSM1010833_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
4071 8c368a17 Daofeng Li 
GSM981249_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
4072 8c368a17 Daofeng Li 
GSM1014514_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
4073 8c368a17 Daofeng Li 
GSM981246_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
4074 8c368a17 Daofeng Li 
GSM1024787_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
4075 8c368a17 Daofeng Li 
GSM1010830_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
4076 8c368a17 Daofeng Li 
GSM981259_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
4077 8c368a17 Daofeng Li 
GSM1008602_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
4078 8c368a17 Daofeng Li 
GSM984620_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
4079 8c368a17 Daofeng Li 
GSM1003466_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
4080 8c368a17 Daofeng Li 
GSM1010841_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
4081 8c368a17 Daofeng Li 
GSM1003572_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
4082 8c368a17 Daofeng Li 
GSM979662_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
4083 8c368a17 Daofeng Li 
GSM1010854_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
4084 8c368a17 Daofeng Li 
GSM1006874_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
4085 8c368a17 Daofeng Li 
GSM1011122_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromFaire
4086 8c368a17 Daofeng Li 
GSM1010770_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
4087 8c368a17 Daofeng Li 
GSM1010879_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
4088 8c368a17 Daofeng Li 
GSM984611_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
4089 8c368a17 Daofeng Li 
GSM981254_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
4090 8c368a17 Daofeng Li 
GSM1010837_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
4091 8c368a17 Daofeng Li 
GSM1006889_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
4092 8c368a17 Daofeng Li 
GSM1010779_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
4093 8c368a17 Daofeng Li 
GSM1006903_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
4094 8c368a17 Daofeng Li 
GSM981257_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
4095 8c368a17 Daofeng Li 
GSM1010781_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
4096 8c368a17 Daofeng Li 
GSM1010761_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
4097 8c368a17 Daofeng Li 
GSM1010825_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
4098 8c368a17 Daofeng Li 
GSM1010864_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
4099 8c368a17 Daofeng Li 
GSM1010765_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
4100 8c368a17 Daofeng Li 
GSM1022663_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
4101 8c368a17 Daofeng Li 
GSM979633_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
4102 8c368a17 Daofeng Li 
GSM979653_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
4103 8c368a17 Daofeng Li 
GSM1010874_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
4104 8c368a17 Daofeng Li 
GSM1024762_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
4105 8c368a17 Daofeng Li 
GSM1008604_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
4106 8c368a17 Daofeng Li 
GSM984608_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
4107 8c368a17 Daofeng Li 
GSM1010722_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
4108 8c368a17 Daofeng Li 
GSM1010827_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
4109 8c368a17 Daofeng Li 
GSM1010787_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
4110 8c368a17 Daofeng Li 
GSM1022653_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
4111 8c368a17 Daofeng Li 
GSM1010883_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
4112 8c368a17 Daofeng Li 
GSM1006905_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
4113 8c368a17 Daofeng Li 
GSM1003575_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
4114 8c368a17 Daofeng Li 
GSM1003477_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
4115 8c368a17 Daofeng Li 
GSM1006912_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeGisRnaPet
4116 8c368a17 Daofeng Li 
GSM1008559_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
4117 8c368a17 Daofeng Li 
GSM1008575_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
4118 8c368a17 Daofeng Li 
GSM1010826_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
4119 8c368a17 Daofeng Li 
GSM1010794_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
4120 8c368a17 Daofeng Li 
GSM979635_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
4121 8c368a17 Daofeng Li 
GSM979655_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
4122 8c368a17 Daofeng Li 
GSM1010843_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
4123 8c368a17 Daofeng Li 
GSM1003500_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
4124 8c368a17 Daofeng Li 
GSM1003564_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
4125 8c368a17 Daofeng Li 
GSM1010856_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
4126 8c368a17 Daofeng Li 
GSM979636_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
4127 8c368a17 Daofeng Li 
GSM981248_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeCshlLongRnaSeq
4128 8c368a17 Daofeng Li 
GSM1010814_3	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
4129 8c368a17 Daofeng Li 
GSM1008589_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
4130 8c368a17 Daofeng Li 
GSM1022649_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
4131 8c368a17 Daofeng Li 
GSM1003525_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
4132 8c368a17 Daofeng Li 
GSM979654_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
4133 8c368a17 Daofeng Li 
GSM1010913_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
4134 8c368a17 Daofeng Li 
GSM1010868_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
4135 8c368a17 Daofeng Li 
GSM1008572_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
4136 8c368a17 Daofeng Li 
GSM1010886_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
4137 8c368a17 Daofeng Li 
GSM1006876_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
4138 8c368a17 Daofeng Li 
GSM1010734_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
4139 8c368a17 Daofeng Li 
GSM979642_4	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRikenCage
4140 8c368a17 Daofeng Li 
GSM1010882_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
4141 8c368a17 Daofeng Li 
GSM1014540_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
4142 8c368a17 Daofeng Li 
GSM1024752_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
4143 8c368a17 Daofeng Li 
GSM1010812_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
4144 8c368a17 Daofeng Li 
GSM1024761_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase
4145 8c368a17 Daofeng Li 
GSM1008563_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
4146 8c368a17 Daofeng Li 
GSM1008597_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromDnase
4147 8c368a17 Daofeng Li 
GSM1003507_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
4148 8c368a17 Daofeng Li 
GSM1006877_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
4149 8c368a17 Daofeng Li 
GSM1003475_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
4150 8c368a17 Daofeng Li 
GSM1014527_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
4151 8c368a17 Daofeng Li 
GSM1010889_2	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
4152 8c368a17 Daofeng Li 
GSM1024793_1	Link=http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDnase